<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Publishing DTD v1.2 20190208//EN" "http://jats.nlm.nih.gov/publishing/1.2/JATS-journalpublishing1.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" article-type="research-article" dtd-version="1.2" xml:lang="en">
    <front>
        <journal-meta>
            <journal-id journal-id-type="pmc">F1000Research</journal-id>
            <journal-title-group>
                <journal-title>F1000Research</journal-title>
            </journal-title-group>
            <issn pub-type="epub">2046-1402</issn>
            <publisher>
                <publisher-name>F1000 Research Limited</publisher-name>
                <publisher-loc>London, UK</publisher-loc>
            </publisher>
        </journal-meta>
        <article-meta>
            <article-id pub-id-type="doi">10.12688/f1000research.72823.2</article-id>
            <article-categories>
                <subj-group subj-group-type="heading">
                    <subject>Research Article</subject>
                </subj-group>
                <subj-group>
                    <subject>Articles</subject>
                </subj-group>
            </article-categories>
            <title-group>
                <article-title>Hypothesis on the pathophysiology of syringomyelia based on analysis of phase-contrast magnetic resonance imaging of Chiari-I malformation patients</article-title>
                <fn-group content-type="pub-status">
                    <fn>
                        <p>[version 2; peer review: 2 approved]</p>
                    </fn>
                </fn-group>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author" corresp="yes">
                    <name>
                        <surname>Chang</surname>
                        <given-names>Han Soo</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <role content-type="http://credit.niso.org/">Formal Analysis</role>
                    <role content-type="http://credit.niso.org/">Investigation</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Project Administration</role>
                    <role content-type="http://credit.niso.org/">Software</role>
                    <role content-type="http://credit.niso.org/">Validation</role>
                    <role content-type="http://credit.niso.org/">Visualization</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <xref ref-type="corresp" rid="c1">a</xref>
                    <xref ref-type="aff" rid="a1">1</xref>
                </contrib>
                <aff id="a1">
                    <label>1</label>Department of Neurosurgery, Tokai University, 143 Shimokasuya, Isehara, Kanagawa, 259-1143, Japan</aff>
            </contrib-group>
            <author-notes>
                <corresp id="c1">
                    <label>a</label>
                    <email xlink:href="mailto:chang-ind@umin.ac.jp">chang-ind@umin.ac.jp</email>
                </corresp>
                <fn fn-type="conflict">
                    <p>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>3</day>
                <month>8</month>
                <year>2023</year>
            </pub-date>
            <pub-date pub-type="collection">
                <year>2021</year>
            </pub-date>
            <volume>10</volume>
            <elocation-id>996</elocation-id>
            <history>
                <date date-type="accepted">
                    <day>1</day>
                    <month>8</month>
                    <year>2023</year>
                </date>
            </history>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2023 Chang HS</copyright-statement>
                <copyright-year>2023</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <self-uri content-type="pdf" xlink:href="https://f1000research.com/articles/10-996/pdf"/>
            <abstract>
                <p>
                    <bold>Background:</bold> Despite a number of hypotheses, our understanding of the pathophysiology of syringomyelia is still limited. The current prevailing hypothesis assumes that the piston-like movement of the cerebellar tonsils drives the cerebrospinal fluid (CSF) into the syrinx through the spinal perivascular space. However, it still needs to be verified by further experimental data. A major unexplained problem is how CSF enters and remains in the syrinx that has a higher pressure than the subarachnoid space.</p>
                <p> 
                    <bold>Methods:</bold> I analyzed phase-contrast MRI scans of 18 patients with Chiari-I malformation with syringomyelia undergoing foramen magnum decompression and 21 healthy volunteers. I analyzed the velocity waveforms of the CSF and the brain in various locations. The obtained velocity waveforms were post-processed using a technique called 
                    <italic toggle="yes">synchronization in situ.</italic> I compared between the preoperative data and the control data (case-control study), as well as between the preoperative and postoperative data (cohort study).</p>
                <p> 
                    <bold>Results:</bold> The syrinx shrank in 17 (94%) patients with good clinical improvement. In Chiari-I patients, the velocity of the tonsil was significantly larger than controls, but was significantly smaller than that of the CSF in the subarachnoid space, suggesting passive rather than active movement. The abnormal tonsillar movement disappeared after surgery, but the velocity waveform of the spinal subarachnoid CSF did not change. These results, contradicting the above mentioned hypothesis, required an alternative explanation. I thus hypothesized that there is a CSF channel between the fourth ventricle and the syrinx. This channel assumes one-way valve function when mildly compressed by the cyclical movement of the cerebellar tonsil. The decompression of the tonsils switches off the one-way valve, collapsing the syrinx.</p>
                <p> 
                    <bold>Conclusions: </bold>My hypothesis reasonably explained my data that clearly contradicted the existing hypothesis, and successfully addressed the above-mentioned theoretical problem. It will serve as a working hypothesis for further study of syringomyelia pathophysiology.</p>
            </abstract>
            <kwd-group kwd-group-type="author">
                <kwd>syringomyelia</kwd>
                <kwd>Chiari malformation</kwd>
                <kwd>pathophysiology</kwd>
                <kwd>hypothesis</kwd>
                <kwd>magnetic resonance imaging</kwd>
                <kwd>phase-contrast</kwd>
            </kwd-group>
            <funding-group>
                <funding-statement>The author(s) declared that no grants were involved in supporting this work.</funding-statement>
            </funding-group>
        </article-meta>
        <notes>
            <sec sec-type="version-changes">
                <label>Revised</label>
                <title>Amendments from Version 1</title>
                <p>The readability of the text has been much improved.</p>
            </sec>
        </notes>
    </front>
    <body>
        <sec id="sec5" sec-type="intro">
            <title>Introduction</title>
            <p>Syringomyelia is a condition in which a fluid-filled cavity, known as syrinx, forms inside the spinal cord, leading to neurological symptoms. Numerous hypotheses have been proposed by various authors to explain the mechanism of syrinx formation.
                <xref ref-type="bibr" rid="ref1">
                    <sup>1</sup>
                </xref>
                <sup>&#x2013;</sup>
                <xref ref-type="bibr" rid="ref13">
                    <sup>13</sup>
                </xref> However, these hypotheses frequently contradict each other, and none seems to fully explain the pathophysiology of syringomyelia.</p>
            <p>The prevailing hypothesis, proposed by Oldfield 
                <italic toggle="yes">et al.</italic>,
                <xref ref-type="bibr" rid="ref14">
                    <sup>14</sup>
                </xref> suggests that piston-like movements of the cerebellar tonsils create pressure waves in the cerebrospinal fluid (CSF), which then push the CSF into the syrinx via the perivascular space. Despite its appeal, this hypothesis remains to be verified and requires new experimental data for confirmation.</p>
            <p>Above all, a fundamental question remains unexplained. It is evident, as confirmed by laws of physics
                <xref ref-type="bibr" rid="ref15">
                    <sup>15</sup>
                </xref> and direct measurements,
                <xref ref-type="bibr" rid="ref7">
                    <sup>7</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref16">
                    <sup>16</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref17">
                    <sup>17</sup>
                </xref> that the pressure inside the syrinx is higher than that of the CSF outside. However, no hypothesis has yet explained how CSF enters and remains in the syrinx, given that its pressure is higher than the outside subarachnoid space.</p>
            <p>In this article, we present our analysis of phase-contrast MRI of patients with Chiari-I-related syringomyelia. The data defied interpretation based on conventional theories, suggesting the need for the development of a new theoretical framework.</p>
        </sec>
        <sec id="sec6" sec-type="methods">
            <title>Methods</title>
            <sec id="sec7">
                <title>Material</title>
                <p>This study solely included patients with Chiari-I malformations who had associated syringomyelia in the cervical cord. The following patients were excluded: those with syringomyelia not related to Chiari-I malformation, those with syringomyelia with basal arachnoiditis, and those with Chiari-I malformation without syringomyelia.</p>
                <p>This study, approved by the Institutional Review Board of Tokai University Hospital (No. 18-609), was a retrospective study on prospectively acquired data. Since January 2011, we have routinely incorporated phase-contrast studies into the cervical spine MRI of patients with Chiari-I malformation. The MRI studies were performed before surgery and at each postoperative follow-up visit, namely, at six months, one year, and then annually thereafter. These MRI studies used the same acquisition techniques described below.</p>
                <p>From January 2011 to April 2019, a total of eighteen eligible patients underwent foramen magnum decompression at our institution. These patients were consecutively enrolled in our study during this period. However, due to missing preoperative data for one patient, we analyzed 17 preoperative MRIs and 18 postoperative MRIs. In addition, we recruited 21 healthy volunteers from our hospital to ensure the mean age was comparable to that of the patients. These volunteers underwent the same MRI studies.</p>
            </sec>
            <sec id="sec8">
                <title>Surgery</title>
                <p>All patients underwent foramen magnum decompression performed by the first author using the same surgical techniques, which consisted of a small suboccipital craniotomy of 2 &#x00d7; 2 cm, C1 laminectomy, and a Y-shaped dural incision followed by fascia patching. We did not perform intradural exploration, which was not necessary in the studied population with no basal arachnoiditis. Next, the freed suboccipital bone flap was repositioned over the decompressed dura and secured with titanium miniplates at an angle to avoid dural compression. Following this, the fascia patch was sutured on the edge of the bone flap using two tenting sutures. This manoeuvre maintained decompression by preventing invasion of postoperative scar tissue.</p>
            </sec>
            <sec id="sec9">
                <title>MRI method</title>
                <p>All magnetic resonance images were obtained using a 1.5 Tesla scanner (Achieva, Philips Medical System, Best, The Netherlands). At each MRI session, phase-contrast images were obtained in the midline sagittal plane, encoding cranio-caudal motion into intensity with a velocity encoding (VENC) of 10 cm/sec. Data acquisition was triggered by the QRS wave of the patient&#x2019;s electrocardiogram, with the cardiac cycle divided into 25 or 35 segments. The detailed imaging parameters were as follows: TR 16 msec, TE 7.2 msec, flip angle 15 degrees, field of view 256 &#x00d7; 256, matrix 352 &#x00d7; 256, and slice thickness 5 mm.</p>
                <p>Each subject&#x2019;s phase-contrast images were displayed on a computer monitor using an image-processing application (
                    <ext-link ext-link-type="uri" xlink:href="https://imagej.nih.gov">ImageJ</ext-link> version 1.52a, National Institutes of Health, Bethesda, Maryland, United States (RRID:SCR_003070)). Circular-shaped regions of interest (ROIs) were set at the following locations (
                    <xref ref-type="fig" rid="f1">Figure 1</xref>): the cerebellar tonsils, the spinal cord segment between the fourth ventricle and the syrinx, the ventral subarachnoid space at the level of the base of the odontoid process, the dorsal subarachnoid space immediately below the tonsil, the rostral portion of the syrinx cavity, and the medulla at the level slightly above the foramen magnum. For the control group, the same ROI settings were used except for the syrinx ROI, which was instead placed at the spinal cord segment at the level of the C3 vertebral body. The average flow speed of the pixels within each ROI was measured at each time point of the cardiac cycle. Consequently, six waveforms corresponding to the six ROIs were obtained for each MRI session and stored in a computer file.</p>
                <fig fig-type="figure" id="f1" orientation="portrait" position="float">
                    <label>Figure 1. </label>
                    <caption>
                        <title>Regions of interest measured.</title>
                        <p>Circles indicate the regions of interest on a mid-sagittal section of a magnetic resonance image at the craniovertebral junction. vs: ventral subarachnoid space; ds: dorsal subarachnoid space.</p>
                    </caption>
                    <graphic id="gr1" orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/154031/d2e77a1d-b290-4c1f-9ea6-1e847d60edee_figure1.gif"/>
                </fig>
                <sec id="sec10">
                    <title>Waveform synchronization</title>
                    <p>The obtained data began at the QRS wave of each patient&#x2019;s electrocardiogram. However, the latency between the QRS wave and the initial rise of brain and CSF movements varied significantly among patients. This variability presented difficulties when we attempted to analyze the data in more detail. It was necessary to post-process the data so that the initial rise of the brain and CSF movements would be better synchronized. For this purpose, we employed the following synchronization technique.</p>
                    <p>Firstly, we defined the CSF trigger point as the time point when the ventral subarachnoid CSF started to move caudally i.e. where the CSF velocity most rapidly changed in the caudal direction. We could identify the CSF trigger point for each MRI session using the ventral subarachnoid CSF waveform from the data file. To account for varying numbers of time bins across MRI sessions, we increased the number of time bins per cardiac cycle to 50 using linear interpolation. We then shifted and synchronized the six waveforms using ring buffers, aligning the CSF trigger point to the midpoint of the waveform. The post-processed data is available in a data repository.
                        <xref ref-type="bibr" rid="ref18">
                            <sup>18</sup>
                        </xref>
                        <sup>,</sup>
                        <xref ref-type="bibr" rid="ref19">
                            <sup>19</sup>
                        </xref> The software used for data analysis can be found in a software repository.
                        <xref ref-type="bibr" rid="ref19">
                            <sup>19</sup>
                        </xref>
                        <sup>,</sup>
                        <xref ref-type="bibr" rid="ref20">
                            <sup>20</sup>
                        </xref>
                    </p>
                </sec>
            </sec>
            <sec id="sec11">
                <title>Data analysis</title>
                <p>We compared the following three groups: (1) Preoperative studies of Chiari-I patients, (2) Studies of normal volunteers, and (3) Postoperative studies of Chiari-I patients at the last clinical visit. For each group, we calculated the mean velocities at the six locations at each time point in the cardiac cycle, which was enabled by the aforementioned synchronization. The waveforms obtained were then plotted for each group.</p>
                <p>We statistically compared the peak caudal velocity at each ROI. Comparisons were made between the control group and the preoperative Chiari-I patients, as well as between the preoperative and postoperative Chiari-I patients. For the ROI of the spinal cord, we also compared the peak rostral velocity in addition to the caudal velocity. This was because, as we describe below, a paradoxical rostral movement of the spinal cord was observed in Chiari-I patients.</p>
                <p>For the statistical analyses, we used the unpaired t-test to compare the control group and preoperative Chiari-I patients, and the paired t-test to compare pre- and postoperative Chiari-I patients. For comparisons of tonsillar velocity and CSF velocities in the dorsal and ventral subarachnoid spaces, we used analysis of variance with Tukey&#x2019;s post hoc multiple comparison test. P values smaller than 0.05 were considered statistically significant.</p>
                <p>The following computer packages were used for the statistical analyses: 
                    <ext-link ext-link-type="uri" xlink:href="https://www.R-project.org/">R version 4.0.4</ext-link> (R Project for Statistical Computing, RRID:SCR_001905) and 
                    <ext-link ext-link-type="uri" xlink:href="http://www.rstudio.com/">RStudio version 1.2.1</ext-link> (RStudio, RRID:SCR_000432).</p>
            </sec>
        </sec>
        <sec id="sec12" sec-type="results">
            <title>Results</title>
            <sec id="sec13">
                <title>Clinical results</title>
                <p>The mean age of the patients was 40.2 years with a standard deviation (SD) of 16.0. The patient group included fourteen females and four males. The mean age of the volunteers was 33.7 years with an SD of 9.8, and it consisted of seven females and fourteen males.</p>
                <p>There were no complications related to the surgery. The average time from surgery to the final postoperative MRI was 633 days (SD 555, range 70&#x2013;1700). The syrinx shrank in seventeen out of the eighteen patients (94%), which led to an improvement in preoperative symptoms (
                    <xref ref-type="fig" rid="f2">Figure 2</xref>). In one patient, upper extremity pain persisted after surgery despite the syrinx shrinking.</p>
                <fig fig-type="figure" id="f2" orientation="portrait" position="float">
                    <label>Figure 2. </label>
                    <caption>
                        <title>Pre- and postoperative cervical-spine MRI of three representative cases (A, B, and C).</title>
                        <p>The left column shows the preoperative images, and the right column shows the postoperative images.</p>
                    </caption>
                    <graphic id="gr2" orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/154031/d2e77a1d-b290-4c1f-9ea6-1e847d60edee_figure2.gif"/>
                </fig>
            </sec>
            <sec id="sec14">
                <title>Velocity waveforms of preoperative Chiari-I patients</title>
                <p>
                    <xref ref-type="fig" rid="f3">Figure 3</xref> displays the mean velocity waveforms for five of the ROIs (excluding the medulla, which exhibited minimal movement) in preoperative Chiari-I patients. As demonstrated in the figure, the cerebellar tonsil (represented by the red line) moved rapidly in the caudal direction in sync with the rapid caudal flow of cerebrospinal fluid in the ventral and dorsal subarachnoid spaces (blue and yellow lines, respectively). The timing of this tonsillar movement was in synchrony with that of the CSF movement (
                    <xref ref-type="fig" rid="f3">Figure 3</xref>).</p>
                <fig fig-type="figure" id="f3" orientation="portrait" position="float">
                    <label>Figure 3. </label>
                    <caption>
                        <title>Mean velocity waveforms in preoperative Chiari-I patients.</title>
                        <p>The abscissa represents one cardiac cycle, divided into 100 percentiles. The ordinate indicates the flow speed in cm/sec. The waveforms have been synchronized so that the point of maximal caudal acceleration of the ventral CSF is placed at the 50th percentile.</p>
                    </caption>
                    <graphic id="gr3" orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/154031/d2e77a1d-b290-4c1f-9ea6-1e847d60edee_figure3.gif"/>
                </fig>
                <p>The peak caudal velocity of the tonsils was significantly smaller than that of the CSF in the subarachnoid space. The mean peak caudal velocity (SD) was 0.76 (0.47) for the tonsils, 2.3 (1.7) for the dorsal subarachnoid space, and 3.5 (2.0) for the ventral subarachnoid. These differences were statistically significant (F = 13.9, p &lt; 0.001). Tukey&#x2019;s post hoc test revealed that each comparison pair was statistically significant, with p values of 0.02 for tonsil vs. dorsal subarachnoid space, &lt;0.001 for tonsil vs. ventral subarachnoid space, and 0.05 for dorsal subarachnoid space vs. ventral subarachnoid space.</p>
                <p>The syrinx fluid (represented by the green line in 
                    <xref ref-type="fig" rid="f3">Figure 3</xref>) also exhibited a rapid caudal movement in synchrony with the CSF and the tonsil. This fluid movement occurred early in the timeline and was almost simultaneous with the caudal flow of the CSF (see 
                    <xref ref-type="fig" rid="f3">Figure 3</xref>). There was no noticeable delay or phase shift between the start of the caudal syrinx fluid movement and that of the subarachnoid CSF movement (
                    <xref ref-type="fig" rid="f3">Figure 3</xref>). Conversely, the reverse flow in the cranial direction began much earlier within the syrinx compared to the subarachnoid space (as shown in 
                    <xref ref-type="fig" rid="f3">Figure 3</xref>).</p>
                <p>A puzzling finding depicted in 
                    <xref ref-type="fig" rid="f3">Figure 3</xref> is the rostral movement of the upper cervical cord (represented by the purple line) occurring when all the other parts were moving caudally in patients. This paradoxical movement of the cord was observed in the controls (see 
                    <xref ref-type="fig" rid="f4">Figure 4</xref>). This difference was statistically significant (refer to 
                    <xref ref-type="table" rid="T1">Table 1</xref>).</p>
                <fig fig-type="figure" id="f4" orientation="portrait" position="float">
                    <label>Figure 4. </label>
                    <caption>
                        <title>Mean velocity waveforms in controls.</title>
                        <p>The same abscissa and ordinate as in 
                            <xref ref-type="fig" rid="f3">Figure 3</xref>. (The legend 
                            <italic toggle="yes">syrinx</italic> denotes the spinal cord at the C5 level.)</p>
                    </caption>
                    <graphic id="gr4" orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/154031/d2e77a1d-b290-4c1f-9ea6-1e847d60edee_figure4.gif"/>
                </fig>
                <table-wrap id="T1" orientation="portrait" position="float">
                    <label>Table 1. </label>
                    <caption>
                        <title>Peak caudal velocity at the ROI in the three groups.</title>
                    </caption>
                    <table content-type="article-table" frame="hsides">
                        <thead>
                            <tr>
                                <th align="left" colspan="1" rowspan="1" valign="top"/>
                                <th align="left" colspan="1" rowspan="1" valign="top">Control</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">P (control vs. preop)</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Preop</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">P (preop vs. postop)</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Postop</th>
                            </tr>
                        </thead>
                        <tbody>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">tonsil</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.31 (0.14)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.001*</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.76 (0.47)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.002*</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.32 ( 0.39)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">ventral SA</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">2.5 (0.77)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.06</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">3.5 (2.0)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.82</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">3.4 (1.3)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">dorsal SA</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1.3 (0.61)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.04*</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">2.3 (1.7)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.34</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1.9 (1.1)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">syrinx</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.34 (0.19)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.001*</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1.4 (1.1)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.24</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1.1 (1.0)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">cord (rostral)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2212;0.0087 (0.0085)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.002*</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2212;0.31 (0.25)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.49</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2212;0.46 (0.34)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">cord (caudal)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.34 (0.13)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.06</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.51 (0.32)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.31</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.39 (0.23)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">medulla</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.31 (0.11)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.40</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.34 (0.25)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.13</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.31 (0.20)</td>
                            </tr>
                        </tbody>
                    </table>
                </table-wrap>
            </sec>
            <sec id="sec15">
                <title>Comparison between preoperative Chiari-I patients and controls</title>
                <p>The prominent movement of the cerebellar tonsils observed in preoperative Chiari-I patients (represented by the red line in 
                    <xref ref-type="fig" rid="f3">Figure 3</xref>) was absent in controls (refer to the red line in 
                    <xref ref-type="fig" rid="f4">Figure 4</xref>). The paradoxical rostral movement of the upper cervical cord (represented by the purple line in 
                    <xref ref-type="fig" rid="f3">Figure 3</xref>) seen in patients was also barely noticeable in the controls (see the purple line in 
                    <xref ref-type="fig" rid="f4">Figure 4</xref>). These differences were statistically significant (refer to 
                    <xref ref-type="table" rid="T1">Table 1</xref>). The CSF velocities in the subarachnoid space were also significantly larger in preoperative Chiari-I patients than in controls (refer to 
                    <xref ref-type="table" rid="T1">Table 1</xref>).</p>
            </sec>
            <sec id="sec16">
                <title>Comparison between pre- and postoperative Chiari-I patients</title>
                <p>
                    <xref ref-type="fig" rid="f5">Figure 5</xref> shows the postoperative mean velocity waveforms. The most notable postoperative change was the disappearance of tonsillar movement. Conversely, the velocity profiles of the other areas analyzed did not significantly deviate from the preoperative profiles (see 
                    <xref ref-type="fig" rid="f3">Figures 3</xref>, 
                    <xref ref-type="fig" rid="f5">5</xref>, and 
                    <xref ref-type="table" rid="T1">Table 1</xref>). 
                    <xref ref-type="fig" rid="f6">Figure 6</xref> presents the velocity waveforms of the tonsil and the dorsal CSF extracted from 
                    <xref ref-type="fig" rid="f3">Figures 3</xref> and 
                    <xref ref-type="fig" rid="f5">5</xref>, along with their 95% confidence intervals. It is evident that the tonsillar velocity was significantly smaller than the CSF velocity, and despite the postoperative disappearance of tonsillar movement, the CSF velocity did not change significantly (refer to 
                    <xref ref-type="fig" rid="f5">Figure 5</xref> and 
                    <xref ref-type="table" rid="T1">Table 1</xref>).</p>
                <fig fig-type="figure" id="f5" orientation="portrait" position="float">
                    <label>Figure 5. </label>
                    <caption>
                        <title>Mean velocity waveforms in postoperative Chiari-I patients.</title>
                        <p>The same abscissa and ordinate as in 
                            <xref ref-type="fig" rid="f3">Figures 3</xref> and 
                            <xref ref-type="fig" rid="f4">4</xref>.</p>
                    </caption>
                    <graphic id="gr5" orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/154031/d2e77a1d-b290-4c1f-9ea6-1e847d60edee_figure5.gif"/>
                </fig>
                <fig fig-type="figure" id="f6" orientation="portrait" position="float">
                    <label>Figure 6. </label>
                    <caption>
                        <title>Velocity waveforms of the tonsil and the dorsal CSF in pre- and postoperative Chiari-I patients.</title>
                        <p>The mean value is shown together with the 95% confidence intervals.</p>
                    </caption>
                    <graphic id="gr6" orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/154031/d2e77a1d-b290-4c1f-9ea6-1e847d60edee_figure6.gif"/>
                </fig>
            </sec>
        </sec>
        <sec id="sec17">
            <title>Discussion</title>
            <sec id="sec18">
                <title>Summary of our findings</title>
                <p>Our results can be summarized as follows.
                    <list list-type="order">
                        <list-item>
                            <label>1.</label>
                            <p>The caudal velocity of the cerebellar tonsils was significantly elevated in preoperative Chiari-I patients, and it returned to normal postoperatively, in sync with syrinx shrinkage.</p>
                        </list-item>
                        <list-item>
                            <label>2.</label>
                            <p>This preoperative tonsillar velocity was significantly lower than the velocity of the CSF.</p>
                        </list-item>
                        <list-item>
                            <label>3.</label>
                            <p>There was no significant difference in the CSF velocity in the subarachnoid space between the pre- and postoperative studies.</p>
                        </list-item>
                    </list>
                </p>
                <p>The first point aligns well with previous studies.
                    <xref ref-type="bibr" rid="ref7">
                        <sup>7</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref10">
                        <sup>10</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref21">
                        <sup>21</sup>
                    </xref>
                    <sup>&#x2013;</sup>
                    <xref ref-type="bibr" rid="ref27">
                        <sup>27</sup>
                    </xref> The elimination of this elevated tonsillar velocity was the only parameter that changed post-surgery (
                    <xref ref-type="fig" rid="f3">Figures 3</xref>, 
                    <xref ref-type="fig" rid="f5">5</xref>, and 
                    <xref ref-type="table" rid="T1">Table 1</xref>). Given that the syrinx shrank in 94% of the patients after surgery, this suggests a strong correlation between the elevated tonsillar velocity and syrinx generation.</p>
                <p>The second point, which has not been reported in previous studies, carries theoretical importance. According to the hypothesis of Oldfield 
                    <italic toggle="yes">et al</italic>.,
                    <xref ref-type="bibr" rid="ref7">
                        <sup>7</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref14">
                        <sup>14</sup>
                    </xref> the piston-like movement of the tonsils generates pressure waves in the spinal subarachnoid CSF, which drives the CSF into the syrinx via the cord&#x2019;s perivascular space. However, our data clearly demonstrated that the velocity of the tonsil was much smaller than that of the CSF (
                    <xref ref-type="fig" rid="f6">Figure 6</xref>). It is challenging to envision how an object moving slower can be the source of a faster moving one. A completely different theoretical paradigm may be needed.</p>
                <p>The third point is also important, despite the conflicting results found in the literature on this topic.
                    <xref ref-type="bibr" rid="ref7">
                        <sup>7</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref26">
                        <sup>26</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref27">
                        <sup>27</sup>
                    </xref> If we follow the postulation of Oldfield et al., which suggests that enhanced CSF pressure waves generate a syrinx, then postoperative syrinx shrinkage should be associated with a decreased CSF velocity in the subarachnoid space. This may also indicate the necessity for a novel theoretical paradigm.</p>
                <p>A more intuitive interpretation of our results might be as follows: In Chiari-I patients, the decreased cross-sectional area of the subarachnoid space at the craniovertebral junction increases resistance to CSF flow. As a result, the velocity of the CSF at the craniovertebral junction was elevated because of the so-called Venturi effect.
                    <xref ref-type="bibr" rid="ref15">
                        <sup>15</sup>
                    </xref> Thus, the piston-like movement of the cerebellar tonsil might be more accurately seen as a result, not the cause, of this increased CSF velocity. Our surgical procedure expanded the cross-sectional area sufficiently to mitigate the elevated tonsillar movement. However, since its effect was only partial, the elevated CSF persisted. It should also be noted that the caudally displaced tonsils further reduce the cross-sectional area. Thus, the vertically moving tonsils create a mechanism resembling a ball valve: the resistance to the caudal flow becomes larger than that to the rostral flow.</p>
            </sec>
            <sec id="sec19">
                <title>Towards a novel theoretical paradigm</title>
                <p>As previously stated, we encountered difficulty interpreting our results within the confines of the current theoretical framework. Moreover, no existing theory adequately explains the paradoxical behavior of CSF entering and remaining in the syrinx despite the pressure gradient. Accordingly, we believe the situation warrants a novel theoretical approach. In subsequent sections, we first aim to examine the prerequisites that such a new theory must satisfy. Following this, we will propose our innovative hypothesis on the pathophysiology of syringomyelia. We offer a preemptive note of caution: this portion of the discussion is speculative and lacks direct support from our data. However, we felt it important to present one potential solution to the aforementioned theoretical challenges.</p>
            </sec>
            <sec id="sec20">
                <title>Premises of the theory</title>
                <p>We propose following three prerequisites for a theoretical understanding of syringomyelia.
                    <list list-type="order">
                        <list-item>
                            <label>1.</label>
                            <p>The syrinx fluid originates from the CSF, and a channel exists that connects the syrinx cavity to the subarachnoid space.</p>
                        </list-item>
                        <list-item>
                            <label>2.</label>
                            <p>The central canal cannot be dismissed as a potential candidate for this channel.</p>
                        </list-item>
                        <list-item>
                            <label>3.</label>
                            <p>There must be some form of a one-way-valve mechanism in place to maintain the expanded state of the syrinx.</p>
                        </list-item>
                    </list>
                </p>
                <p>There is a significant amount of evidence supporting the first prerequisite. The composition of the syrinx fluid is the same as that of the CSF.
                    <xref ref-type="bibr" rid="ref28">
                        <sup>28</sup>
                    </xref> Intrathecally administered contrast or tracer materials readily enter the syrinx cavity.
                    <xref ref-type="bibr" rid="ref29">
                        <sup>29</sup>
                    </xref>
                    <sup>&#x2013;</sup>
                    <xref ref-type="bibr" rid="ref31">
                        <sup>31</sup>
                    </xref> Recently, Heiss 
                    <italic toggle="yes">et al</italic>., quantitatively analyzed the accumulation of intrathecally administered contrast material in non-tumor-related syrinxes.
                    <xref ref-type="bibr" rid="ref30">
                        <sup>30</sup>
                    </xref>
                </p>
                <p>The second prerequisite, however, is contentious and warrants detailed discussion in the next section.</p>
            </sec>
            <sec id="sec21">
                <title>The central canal</title>
                <p>Gardner and Angel
                    <xref ref-type="bibr" rid="ref1">
                        <sup>1</sup>
                    </xref> and Williams
                    <xref ref-type="bibr" rid="ref32">
                        <sup>32</sup>
                    </xref> initially hypothesized that CSF enters the syrinx through a patent central canal. However, this theory has recently fallen out of favor for several reasons.
                    <list list-type="order">
                        <list-item>
                            <label>1.</label>
                            <p>MRI scans do not typically show a connection between the fourth ventricle and the syrinx in most cases.</p>
                        </list-item>
                        <list-item>
                            <label>2.</label>
                            <p>Autopsy studies of syrinx patients have apparently shown minimal correlation between the syrinx and the central canal.</p>
                        </list-item>
                        <list-item>
                            <label>3.</label>
                            <p>Autopsy studies have shown that the central canal gradually becomes obliterated as one ages.</p>
                        </list-item>
                    </list>
                </p>
                <p>The first point might not hold a valid argument. The diameter of the central canal is approximately 100 &#x03bc;m.
                    <xref ref-type="bibr" rid="ref33">
                        <sup>33</sup>
                    </xref> Given the current resolution of MRI scans, it is difficult to clearly display a channel of this size.
                    <xref ref-type="bibr" rid="ref34">
                        <sup>34</sup>
                    </xref> Therefore, the inability of MRI scans to illustrate the connection between the fourth ventricle and the syrinx does not necessarily prove or disprove the existence of such a channel.</p>
                <p>Regarding the second point, Milhorat 
                    <italic toggle="yes">et al</italic>.,
                    <xref ref-type="bibr" rid="ref35">
                        <sup>35</sup>
                    </xref> published an extensive autopsy series involving 105 syrinx patients. The authors classified the cases into 47 communicating and 23 noncommunicating syrinxes, based on the MRI findings. The remaining 35 cases were syrinxes of various etiologies. Of these 23 noncommunicating syrinxes, 70% extended rostrally to a stenotic central canal, while 30% extended to a patent central canal. As per the author&#x2019;s descriptions, the stenotic central canals did not appear to be obliterated. To simplify, 100% of the noncommunicating syrinxes rostrally continued to a patent central canal. Therefore, these findings suggest, rather than refute, a potential role of the central canal in the pathogenesis of syringomyelia.</p>
                <p>With regards to the third point, the central canal was traditionally believed to be occluded in human adults.
                    <xref ref-type="bibr" rid="ref34">
                        <sup>34</sup>
                    </xref> However, recent studies indicate that this occlusion is gradual process related to aging.
                    <xref ref-type="bibr" rid="ref33">
                        <sup>33</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref36">
                        <sup>36</sup>
                    </xref> Newman 
                    <italic toggle="yes">et al</italic>.,
                    <xref ref-type="bibr" rid="ref36">
                        <sup>36</sup>
                    </xref> found in their autopsy study of 60 cases that the central canal remained patent up until the fourth decade of life, while Yasui 
                    <italic toggle="yes">et al</italic>.,
                    <xref ref-type="bibr" rid="ref33">
                        <sup>33</sup>
                    </xref> observed that occlusion of the central canal occurred at slightly earlier ages. In their study of 232 autopsy cases, Milhorat 
                    <italic toggle="yes">et al</italic>. reported that occlusion of the central canal was evident in only four individuals.
                    <xref ref-type="bibr" rid="ref37">
                        <sup>37</sup>
                    </xref> Storer 
                    <italic toggle="yes">et al</italic>.,
                    <xref ref-type="bibr" rid="ref34">
                        <sup>34</sup>
                    </xref> suggested that&#x201d;studying the morphology of the central canal using only histological sections&#x201d; is challenging due to its three-dimensional nature, and proposed a computerized 3-D method for assessment. Considering that Chiari-I malformation typically occurs in the pediatric population and relatively early adulthood,
                    <xref ref-type="bibr" rid="ref3">
                        <sup>3</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref38">
                        <sup>38</sup>
                    </xref> the potential role of a patent central canal in the pathogenesis of syringomyelia cannot be dismissed.</p>
            </sec>
            <sec id="sec22">
                <title>One-way valve mechanism</title>
                <p>The third assumption posits that a one-way valve mechanism is necessary to explain the generation and maintenance of syringomyelia. This idea has been proposed by previous authors.
                    <xref ref-type="bibr" rid="ref6">
                        <sup>6</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref39">
                        <sup>39</sup>
                    </xref> However, the concept of the one-way valve mechanism has not been properly integrated into earlier theories of syringomyelia. Nevertheless, this concept might prove to be crucial if we consider the following points. Firstly, basic physical laws indicate that the syrinx, in its distended state, has a higher internal pressure than external.
                    <xref ref-type="bibr" rid="ref15">
                        <sup>15</sup>
                    </xref> It is intuitively understood that the internal pressure must counteract the elastic force of the syrinx wall, in addition to the external pressure. A few experiments with direct measurement of the syrinx pressure have proven that interior pressure was higher than the outside pressure.
                    <xref ref-type="bibr" rid="ref7">
                        <sup>7</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref17">
                        <sup>17</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref39">
                        <sup>39</sup>
                    </xref>
                </p>
                <p>Therefore, any theory of syringomyelia assuming a CSF channel between the syrinx and the subarachnoid space must account for the mechanism by which the syrinx maintains its expanded state against the pressure gradient. Without this mechanism, CSF would flow from the higher-pressure syrinx cavity to the lower-pressure subarachnoid space until the syrinx collapses and the pressure gradient is equilibrated. The assumption of a one-way valve existence appears to be a plausible solution to this problem.</p>
            </sec>
            <sec id="sec23">
                <title>Hypothesis</title>
                <p>Our hypothesis on the pathophysiology of syringomyelia can be summarized as follows:
                    <list list-type="order">
                        <list-item>
                            <label>1.</label>
                            <p>There is a communication channel between the fourth ventricle and the syrinx, most likely a patent central canal.</p>
                        </list-item>
                        <list-item>
                            <label>2.</label>
                            <p>When a direction-selective resistance is present in the subarachnoid space, repetitive pressure waves across this resistance pump CSF through this channel, thereby creating a syrinx distally.</p>
                        </list-item>
                        <list-item>
                            <label>3.</label>
                            <p>Decompression of the foramen magnum neutralizes this direction-selective resistance by eliminating the local compression, leading to the collapse of the syrinx.</p>
                        </list-item>
                    </list>
                </p>
                <p>The concept of the central canal functioning as a one-way valve was proposed by du Boulay 
                    <italic toggle="yes">et al</italic>., in 1974.
                    <xref ref-type="bibr" rid="ref6">
                        <sup>6</sup>
                    </xref> This long-neglected idea warrants reconsideration in light of the premises outlined above. The herniated tonsils in Chiari patients move in a piston-like manner, aligning with the cyclical CSF movements. We might equate this piston-like movement to the movement of a ball in a ball valve. In other words, the CSF encounters more resistance in the caudal direction than in the rostral direction. Data show that the velocity of the tonsils and the CSF near the craniovertebral junction has higher peak velocity in the caudal direction than in the rostral direction (
                    <xref ref-type="fig" rid="f3">Figure 3</xref>). As per the Venturi effect, higher velocity signifies higher resistance, suggesting there is a unidirectional resistance to the CSF flow at the craniovertebral junction; specifically, the resistance to the caudal CSF flow is greater than that to the rostral CSF flow. Williams 
                    <italic toggle="yes">et al</italic>. demonstrated this phenomenon and postulated that this unidirectional CSF resistance creates a 
                    <italic toggle="yes">sucking</italic> mechanism that generates syrinxes.
                    <xref ref-type="bibr" rid="ref2">
                        <sup>2</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref32">
                        <sup>32</sup>
                    </xref> Our hypothesis bears resemblance to Williams&#x2019; idea, though a more detailed explanation is necessary. As demonstrated in our previous article,
                    <xref ref-type="bibr" rid="ref12">
                        <sup>12</sup>
                    </xref> when resistance to CSF flow in the subarachnoid space increases at a certain point, the transmural pressure in the central canal decreases in the downstream segment. Therefore, with reciprocating flows across a point with unidirectionally increased resistance, decreased intramural pressure will be repetitively generated in the central canal situated downstream to the increased resistance. This effectively creates a one-way valve mechanism in the central canal. We have supporting evidence for this concept from our simulation model
                    <xref ref-type="bibr" rid="ref11">
                        <sup>11</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref12">
                        <sup>12</sup>
                    </xref> and are preparing to publish it.</p>
                <p>Our hypothesis also clearly explains why limited decompression at the foramen magnum is effective in reducing the size of the syrinx. Localized decompression at the craniovertebral junction relieves cord compression and halts the piston-like movement of the tonsils along with the unidirectional CSF resistance. This disables the one-way valve function of the central canal. The fluid within the syrinx will then flow out in accordance with the pressure gradient, ultimately causing the syrinx to collapse.</p>
                <p>This hypothesis resolves the problem concerning the interpretation of our phase-contrast data. The only difference in the postoperative phase-contrast data was the cessation of the tonsillar movement; there was no significant difference in the movement of the CSF in the subarachnoid space (
                    <xref ref-type="fig" rid="f6">Figure 6</xref>). Therefore, an explanation was required to understand how the cessation of tonsillar movement caused the syrinx to shrink without significant changes in subarachnoid CSF movement. Our hypothesis explains this in a straightforward manner. The disappearance of the piston-like movement of the tonsils deactivates the one-way valve function of the central canal. The subarachnoid CSF movement plays no role in this causal relationship.</p>
                <p>On the other hand, other hypotheses that consider the perivascular space as the CSF channel may encounter two major problems. First, these hypotheses might struggle to identify a one-way valve mechanism. There are no structures along the perivascular space that could function as a one-way valve. However, without presuming a one-way valve mechanism, the CSF in the syrinx would flow out due to the pressure gradient between the syrinx and the subarachnoid space. Second, even if there is a one-way valve in the perivascular space in the spinal cord, it is unclear how this valve would cease to function following simple decompression at the craniovertebral junction. Answering this question could pose a challenge. Therefore, in our opinion, the theories based on the perivascular space present a serious theoretical problem.</p>
            </sec>
            <sec id="sec24">
                <title>Limitations and future prospects</title>
                <p>The number of patients in this study was relatively small. Although statistically significant results were obtained, they should be interpreted with a certain degree of caution. While our hypothesis circumvented the difficulties of existing hypotheses and reasonably explained the data we gathered, it still lacks sufficient direct evidence to assert its truthfulness. Thus, our hypothesis thus remains as such until further supporting evidence is obtained in the future. However, it will serve as a working hypothesis for future syringomyelia studies. The exact mechanism of how the one-way valve appears in the central canal when the external CSF movement is blocked in one direction is not described in this report. A detailed explanation using computer simulation will soon be published. If a similar type of CSF movement blockage caused by the cerebellar tonsil occurs in other locations in the spinal canal, syrinxes could potentially be generated using the same mechanism. Therefore, it is possible that our hypothesis could be extended to explain the pathophysiology of syringomyelia associated with arachnopathy.
                    <xref ref-type="bibr" rid="ref40">
                        <sup>40</sup>
                    </xref>
                </p>
            </sec>
        </sec>
        <sec id="sec25" sec-type="conclusions">
            <title>Conclusions</title>
            <p>The results of our phase-contrast data, obtained from Chiari-I patients, suggest a strong correlation between tonsillar movement and syrinx formation. However, this relationship does not appear to be mediated by CSF pressure waves in the subarachnoid space, which contradicts the existing hypotheses regarding the pathophysiology of syringomyelia. These findings imply the need for a new theoretical framework. We, therefore, propose a novel hypothesis for syrinx generation: the direction-selective resistance to CSF flow in the subarachnoid space creates a one-way-valve-like mechanism in the intraspinal channel. This could potentially resolve one the theoretical dilemma of how CSF enters and remains in the syrinx, despite it having a higher pressure than the surrounding subarachnoid space.</p>
        </sec>
        <sec id="sec26">
            <title>Data availability</title>
            <sec id="sec27">
                <title>Underlying data</title>
                <p>Dryad: Underlying data &#x2018;Phase-contrast MRI data of 18 Chiari-I malformation patients and 21 controls&#x2019;. 
                    <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.5061/dryad.37pvmcvm0">https://doi.org/10.5061/dryad.37pvmcvm0</ext-link>.
                    <xref ref-type="bibr" rid="ref18">
                        <sup>18</sup>
                    </xref>
                    <list list-type="bullet">
                        <list-item>
                            <label>&#x2022;</label>
                            <p>Data files: encoded_data.json</p>
                        </list-item>
                    </list>
                </p>
                <p>Data are available under the terms of the 
                    <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/publicdomain/zero/1.0/">Creative Commons Zero &#x201c;No rights reserved&#x201d; data waiver</ext-link> (CC0 1.0 Public domain dedication).</p>
            </sec>
            <sec id="sec28">
                <title>Extended data</title>
                <p>Zenodo: Extended data &#x2018;Phase-contrast MRI data of 18 Chiari-I malformation patients and 21 controls. 
                    <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.5281/zenodo.5338940">https://doi.org/10.5281/zenodo.5338940</ext-link>.
                    <xref ref-type="bibr" rid="ref41">
                        <sup>41</sup>
                    </xref>
                </p>
                <p>This project contains the following extended data:
                    <list list-type="bullet">
                        <list-item>
                            <label>&#x2022;</label>
                            <p>Video file: 57.mp4</p>
                        </list-item>
                    </list>
                </p>
                <p>Data are available under the terms of the 
                    <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution 4.0 International license</ext-link> (CC-BY 4.0).</p>
            </sec>
        </sec>
        <sec id="sec29">
            <title>Software availability</title>
            <p>Archived source code at time of publication: 
                <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.5281/zenodo.5200009">https://doi.org/10.5281/zenodo.5200009</ext-link>.
                <xref ref-type="bibr" rid="ref20">
                    <sup>20</sup>
                </xref>
                <list list-type="bullet">
                    <list-item>
                        <label>&#x2022;</label>
                        <p>File: analyze.py</p>
                    </list-item>
                </list>
            </p>
            <p>License: 
                <ext-link ext-link-type="uri" xlink:href="https://opensource.org/licenses/MIT">MIT</ext-link>
            </p>
            <p>Supplementary information: 
                <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.5281/zenodo.5229173">https://doi.org/10.5281/zenodo.5229173</ext-link>.
                <xref ref-type="bibr" rid="ref19">
                    <sup>19</sup>
                </xref>
                <list list-type="bullet">
                    <list-item>
                        <label>&#x2022;</label>
                        <p>File: README.txt</p>
                    </list-item>
                </list>
            </p>
            <p>License: 
                <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution 4.0 International license</ext-link> (CC-BY 4.0).</p>
        </sec>
        <sec id="sec30">
            <title>Consent</title>
            <p>Written informed consent for publication of the patients details and their images was obtained from the patients.</p>
        </sec>
    </body>
    <back>
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    <sub-article article-type="reviewer-report" id="report193500">
        <front-stub>
            <article-id pub-id-type="doi">10.5256/f1000research.154031.r193500</article-id>
            <title-group>
                <article-title>Reviewer response for version 2</article-title>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author">
                    <name>
                        <surname>Ohnishi</surname>
                        <given-names>Yuichiro</given-names>
                    </name>
                    <xref ref-type="aff" rid="r193500a1">1</xref>
                    <role>Referee</role>
                </contrib>
                <aff id="r193500a1">
                    <label>1</label>National Cerebral and Cardiovascular Center, Osaka, Japan</aff>
            </contrib-group>
            <author-notes>
                <fn fn-type="conflict">
                    <p>
                        <bold>Competing interests: </bold>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>24</day>
                <month>8</month>
                <year>2023</year>
            </pub-date>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2023 Ohnishi Y</copyright-statement>
                <copyright-year>2023</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access peer review report distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <related-article ext-link-type="doi" id="relatedArticleReport193500" related-article-type="peer-reviewed-article" xlink:href="10.12688/f1000research.72823.2"/>
            <custom-meta-group>
                <custom-meta>
                    <meta-name>recommendation</meta-name>
                    <meta-value>approve</meta-value>
                </custom-meta>
            </custom-meta-group>
        </front-stub>
        <body>
            <p>I appreciate this opportunity to review this paper. I say it is accepted for indexing.</p>
            <p>Is the work clearly and accurately presented and does it cite the current literature?</p>
            <p>Partly</p>
            <p>If applicable, is the statistical analysis and its interpretation appropriate?</p>
            <p>Partly</p>
            <p>Are all the source data underlying the results available to ensure full reproducibility?</p>
            <p>Partly</p>
            <p>Is the study design appropriate and is the work technically sound?</p>
            <p>Partly</p>
            <p>Are the conclusions drawn adequately supported by the results?</p>
            <p>Partly</p>
            <p>Are sufficient details of methods and analysis provided to allow replication by others?</p>
            <p>Partly</p>
            <p>Reviewer Expertise:</p>
            <p>Neurosurgery</p>
            <p>I confirm that I have read this submission and believe that I have an appropriate level of expertise to confirm that it is of an acceptable scientific standard.</p>
        </body>
    </sub-article>
    <sub-article article-type="reviewer-report" id="report193499">
        <front-stub>
            <article-id pub-id-type="doi">10.5256/f1000research.154031.r193499</article-id>
            <title-group>
                <article-title>Reviewer response for version 2</article-title>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author">
                    <name>
                        <surname>Klinge</surname>
                        <given-names>Petra M</given-names>
                    </name>
                    <xref ref-type="aff" rid="r193499a1">1</xref>
                    <role>Referee</role>
                </contrib>
                <aff id="r193499a1">
                    <label>1</label>Brown University, Providence, USA</aff>
            </contrib-group>
            <author-notes>
                <fn fn-type="conflict">
                    <p>
                        <bold>Competing interests: </bold>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>9</day>
                <month>8</month>
                <year>2023</year>
            </pub-date>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2023 Klinge PM</copyright-statement>
                <copyright-year>2023</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access peer review report distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <related-article ext-link-type="doi" id="relatedArticleReport193499" related-article-type="peer-reviewed-article" xlink:href="10.12688/f1000research.72823.2"/>
            <custom-meta-group>
                <custom-meta>
                    <meta-name>recommendation</meta-name>
                    <meta-value>approve</meta-value>
                </custom-meta>
            </custom-meta-group>
        </front-stub>
        <body>
            <p>I have no further comments to make. I can be accepted as it is.</p>
            <p>Is the work clearly and accurately presented and does it cite the current literature?</p>
            <p>Yes</p>
            <p>If applicable, is the statistical analysis and its interpretation appropriate?</p>
            <p>I cannot comment. A qualified statistician is required.</p>
            <p>Are all the source data underlying the results available to ensure full reproducibility?</p>
            <p>Yes</p>
            <p>Is the study design appropriate and is the work technically sound?</p>
            <p>Yes</p>
            <p>Are the conclusions drawn adequately supported by the results?</p>
            <p>Partly</p>
            <p>Are sufficient details of methods and analysis provided to allow replication by others?</p>
            <p>Yes</p>
            <p>Reviewer Expertise:</p>
            <p>Chiari, syringomyelia, tethered cord, hydrocephalus</p>
            <p>I confirm that I have read this submission and believe that I have an appropriate level of expertise to confirm that it is of an acceptable scientific standard.</p>
        </body>
    </sub-article>
    <sub-article article-type="reviewer-report" id="report163449">
        <front-stub>
            <article-id pub-id-type="doi">10.5256/f1000research.76427.r163449</article-id>
            <title-group>
                <article-title>Reviewer response for version 1</article-title>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author">
                    <name>
                        <surname>Ohnishi</surname>
                        <given-names>Yuichiro</given-names>
                    </name>
                    <xref ref-type="aff" rid="r163449a1">1</xref>
                    <role>Referee</role>
                </contrib>
                <aff id="r163449a1">
                    <label>1</label>National Cerebral and Cardiovascular Center, Osaka, Japan</aff>
            </contrib-group>
            <author-notes>
                <fn fn-type="conflict">
                    <p>
                        <bold>Competing interests: </bold>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>27</day>
                <month>2</month>
                <year>2023</year>
            </pub-date>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2023 Ohnishi Y</copyright-statement>
                <copyright-year>2023</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access peer review report distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <related-article ext-link-type="doi" id="relatedArticleReport163449" related-article-type="peer-reviewed-article" xlink:href="10.12688/f1000research.72823.1"/>
            <custom-meta-group>
                <custom-meta>
                    <meta-name>recommendation</meta-name>
                    <meta-value>approve-with-reservations</meta-value>
                </custom-meta>
            </custom-meta-group>
        </front-stub>
        <body>
            <p>This manuscript&#x00a0;investigated&#x00a0;the differences of velocity waveforms of the CSF in&#x00a0;various craniocervical locations between the preoperative and control cases, as well as between the preoperative and postoperative cases. Author described that the pressure inside the syrinx is higher than that of the CSF outside. There is the current prevailing hypothesis assumes that the piston-like movement of the cerebellar tonsils drives the CSF into the syrinx through the spinal perivascular space. Author also mentioned that a major unexplained problem is how CSF enters and remains in the syrinx that has a higher pressure than the subarachnoid space. Currently, it still remains unknown how CSF enters and remains in the syrinx, which has higher pressure than the outside subarachnoid space. Author propose a new hypothesis on the pathophysiology of syringomyelia.</p>
            <p> </p>
            <p> This study is the single institution and small sample size. Introduction is compact. I think author&#x2019;s surgery is solid. Discussion is too speculatively written. Overall, I am impressed with the author's hypothesis. Results showed that the postoperative tonsillar velocity was significantly improved. While, there was no significant changes of subarachnoid CSF, spinal cord, and medulla in postoperative velocity. The abnormal tonsillar movement disappeared after surgery. However, results were inadequate to answer author's question. The pressure, CSF velocity, tonsillar movement, anatomical connection to syrinx, and other factors are implicated in Chiari-I malformation.</p>
            <p> </p>
            <p> My main concerns are below. 1) What is the reason that the velocity of postoperative CSF was not changed significantly. 2) The CSF velocity has the possibility to decrease the pressure of syrinx? 3) If so, you can explain this mechanism?</p>
            <p>Is the work clearly and accurately presented and does it cite the current literature?</p>
            <p>Partly</p>
            <p>If applicable, is the statistical analysis and its interpretation appropriate?</p>
            <p>Partly</p>
            <p>Are all the source data underlying the results available to ensure full reproducibility?</p>
            <p>Partly</p>
            <p>Is the study design appropriate and is the work technically sound?</p>
            <p>Partly</p>
            <p>Are the conclusions drawn adequately supported by the results?</p>
            <p>Partly</p>
            <p>Are sufficient details of methods and analysis provided to allow replication by others?</p>
            <p>Partly</p>
            <p>Reviewer Expertise:</p>
            <p>Neurosurgery</p>
            <p>I confirm that I have read this submission and believe that I have an appropriate level of expertise to confirm that it is of an acceptable scientific standard, however I have significant reservations, as outlined above.</p>
        </body>
        <sub-article article-type="response" id="comment10025-163449">
            <front-stub>
                <contrib-group>
                    <contrib contrib-type="author">
                        <name>
                            <surname>Chang</surname>
                            <given-names>Hans Soo</given-names>
                        </name>
                        <aff>Tokai University, Japan</aff>
                    </contrib>
                </contrib-group>
                <author-notes>
                    <fn fn-type="conflict">
                        <p>
                            <bold>Competing interests: </bold>No competing interests were disclosed.</p>
                    </fn>
                </author-notes>
                <pub-date pub-type="epub">
                    <day>4</day>
                    <month>8</month>
                    <year>2023</year>
                </pub-date>
            </front-stub>
            <body>
                <p>Thank you very much for reviewing our manuscript.</p>
                <p> </p>
                <p> We have revised our manuscript, improving English expressions throughout. We have also rewritten the discussion to ensure it has a better logical structure.</p>
                <p> </p>
                <p> As we stated in the discussion, our data contradicts existing hypotheses. Moreover, the hypotheses that propose CSF enters the syrinx via the perivascular space face a significant theoretical challenge: they need to explain how CSF enters and remains in the syrinx against the pressure gradient (with syrinx pressure being higher than the surrounding subarachnoid space). We believe that a complete overhaul of the theoretical framework is needed. We must construct our theory from the ground up.</p>
                <p> </p>
                <p> In this context, we have offered our hypothesis as an attempt to overcome this theoretical difficulty. We clearly stated in the discussion that our hypothesis is speculative and is not directly supported by our data. However, given the current theoretical impasse, we believe that presenting our hypothesis is justified, as it could serve as a working hypothesis, stimulating future studies.</p>
                <p> </p>
                <p> The underlying mechanism of our theory is presented in our revised manuscript more clearly. For further clarification, we have conducted a computer simulation study of CSF dynamics in the spine to support our theory. We have drafted a manuscript and submitted it to a journal. It provides a more detailed explanation of our hypothesis. Unfortunately, it is still in the review phase, so we cannot present a citation at this time.</p>
                <p> </p>
                <p> We believe that our manuscript has improved significantly thanks to the reviewer's comments. We would be grateful if the reviewer could take the time to review our revised manuscript.</p>
            </body>
        </sub-article>
    </sub-article>
    <sub-article article-type="reviewer-report" id="report161190">
        <front-stub>
            <article-id pub-id-type="doi">10.5256/f1000research.76427.r161190</article-id>
            <title-group>
                <article-title>Reviewer response for version 1</article-title>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author">
                    <name>
                        <surname>Klinge</surname>
                        <given-names>Petra M</given-names>
                    </name>
                    <xref ref-type="aff" rid="r161190a1">1</xref>
                    <role>Referee</role>
                </contrib>
                <aff id="r161190a1">
                    <label>1</label>Brown University, Providence, USA</aff>
            </contrib-group>
            <author-notes>
                <fn fn-type="conflict">
                    <p>
                        <bold>Competing interests: </bold>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>6</day>
                <month>2</month>
                <year>2023</year>
            </pub-date>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2023 Klinge PM</copyright-statement>
                <copyright-year>2023</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access peer review report distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <related-article ext-link-type="doi" id="relatedArticleReport161190" related-article-type="peer-reviewed-article" xlink:href="10.12688/f1000research.72823.1"/>
            <custom-meta-group>
                <custom-meta>
                    <meta-name>recommendation</meta-name>
                    <meta-value>approve-with-reservations</meta-value>
                </custom-meta>
            </custom-meta-group>
        </front-stub>
        <body>
            <p>
                <bold>Editorial Note from F1000Research &#x2013; 27
                    <sup>th</sup> February 2023: A previous version of this peer review report raised concerns about the methodology and data. Following further review of the data, the reviewer chose to withdraw these concerns. The approval status has been changed from Not Approved to Approved with Reservations</bold>
            </p>
            <p> The author proposes a new concept of syringomyelia formation in CM based on a tailored MRI simulation. The weight is on the MRI methodology that has been published and presented previously and is available in the Data Availability section of the article. Given that, the data suggest an additional intriguing hypothesis of syrinx formation when comparing Chiari to controls and pre and post-surgery. The authors propose a one-way valve mechanism because that is the only way to explain syrinx formation and reduction based on their finding of reduced tonsil velocity and unchanged increased CSF velocity in the spinal SAS post-surgery. Naturally, there is no anatomical or other hard evidence available to show that the one-way valve mechanism is anatomically relevant and existing, but given the MRI observations and calculations in this patient series, even though speculative of nature and not the proof or implementation of a new concept, it is a reasonable addition to the pathophysiology of syringomyelia, which is still under scrutiny. I would only ask the authors to be mindful, when they say " that their hypothesis contradicts and or is a disproof of pre-existing theories"&#x00a0; because findings were interpreted based on different methods, tests and imaging algorithms. They should make a more balanced statement in this regard.</p>
            <p> The author must avoid a narrative style &#x201c; I have&#x2026;&#x201d; , &#x201c; I conducted&#x2026;&#x201d; , &#x201c; I did and decided...&#x201d;. The entire paper is more a narrative style, particularly when detailing the methods.</p>
            <p> The MRI method may be reviewed by an MRI physicist or neuroradiologist. Also, the statistical methods need to be reviewed with a statistician as the paired and unpaired T-test with Turkey post-hoc seem too crude. ANOVA testing or multivariate testing seems more appropriate.</p>
            <p>Is the work clearly and accurately presented and does it cite the current literature?</p>
            <p>Yes</p>
            <p>If applicable, is the statistical analysis and its interpretation appropriate?</p>
            <p>I cannot comment. A qualified statistician is required.</p>
            <p>Are all the source data underlying the results available to ensure full reproducibility?</p>
            <p>Yes</p>
            <p>Is the study design appropriate and is the work technically sound?</p>
            <p>Yes</p>
            <p>Are the conclusions drawn adequately supported by the results?</p>
            <p>Partly</p>
            <p>Are sufficient details of methods and analysis provided to allow replication by others?</p>
            <p>Yes</p>
            <p>Reviewer Expertise:</p>
            <p>Chiari, syringomyelia, tethered cord, hydrocephalus</p>
            <p>I confirm that I have read this submission and believe that I have an appropriate level of expertise to confirm that it is of an acceptable scientific standard, however I have significant reservations, as outlined above.</p>
        </body>
        <sub-article article-type="response" id="comment10024-161190">
            <front-stub>
                <contrib-group>
                    <contrib contrib-type="author">
                        <name>
                            <surname>Chang</surname>
                            <given-names>Hans Soo</given-names>
                        </name>
                        <aff>Tokai University, Japan</aff>
                    </contrib>
                </contrib-group>
                <author-notes>
                    <fn fn-type="conflict">
                        <p>
                            <bold>Competing interests: </bold>There is no competing interests.</p>
                    </fn>
                </author-notes>
                <pub-date pub-type="epub">
                    <day>4</day>
                    <month>8</month>
                    <year>2023</year>
                </pub-date>
            </front-stub>
            <body>
                <p>Thank you very much for reviewing our manuscript.</p>
                <p> </p>
                <p> We have improved the English expressions throughout the entire manuscript as suggested by the reviewer.</p>
                <p> </p>
                <p> We have also enhanced the explanation of the synchronization method described in our manuscript. We believe that it has become much more understandable. Our procedure merely involves synchronizing the waveforms obtained from each individual. This is simply a post-processing of data acquired from the MRI and has no connection with MRI acquisition techniques. We believe there is no need for a physicist to review our manuscript.</p>
                <p> </p>
                <p> Regarding the statistics, it's important to note that we carried out two distinct comparisons: (1) preoperative Chiari patients versus controls, and (2) pre- and postoperative studies of Chiari patients. In the first comparison, the data consist of two separate series, while in the second comparison, the data represent repeated measures from the same individuals. We believe it's entirely reasonable to conduct t-tests individually for these two comparisons. However, if we were, as the reviewer suggested, to perform a statistical analysis combining these three groups: pre- and postoperative Chiari patients and controls, we would face a problem as the data incorporate both individual and repeated measures. To overcome this issue, we would need to resort to a more advanced statistical analysis such as mixed-effects models. Nevertheless, we believe this would be excessive for the current situation. Therefore, we maintain that our approach of employing two separate t-tests is justified.</p>
                <p> </p>
                <p> We believe that our manuscript has improved significantly thanks to the comments from the reviewer. We would be grateful if she could take the time to review our manuscript again.</p>
            </body>
        </sub-article>
    </sub-article>
</article>
