<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Publishing DTD v1.2 20190208//EN" "http://jats.nlm.nih.gov/publishing/1.2/JATS-journalpublishing1.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" article-type="systematic-review" dtd-version="1.2" xml:lang="en">
    <front>
        <journal-meta>
            <journal-id journal-id-type="pmc">F1000Research</journal-id>
            <journal-title-group>
                <journal-title>F1000Research</journal-title>
            </journal-title-group>
            <issn pub-type="epub">2046-1402</issn>
            <publisher>
                <publisher-name>F1000 Research Limited</publisher-name>
                <publisher-loc>London, UK</publisher-loc>
            </publisher>
        </journal-meta>
        <article-meta>
            <article-id pub-id-type="doi">10.12688/f1000research.74087.1</article-id>
            <article-categories>
                <subj-group subj-group-type="heading">
                    <subject>Systematic Review</subject>
                </subj-group>
                <subj-group>
                    <subject>Articles</subject>
                </subj-group>
            </article-categories>
            <title-group>
                <article-title>Comparing natural hydrogels to self-assembling peptides in spinal cord injury treatment: a systematic review</article-title>
                <fn-group content-type="pub-status">
                    <fn>
                        <p>[version 1; peer review: 1 not approved]</p>
                    </fn>
                </fn-group>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Mojtabavi</surname>
                        <given-names>Kurosh</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Formal Analysis</role>
                    <role content-type="http://credit.niso.org/">Investigation</role>
                    <role content-type="http://credit.niso.org/">Validation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <xref ref-type="aff" rid="a1">1</xref>
                    <xref ref-type="aff" rid="a2">2</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Gholami</surname>
                        <given-names>Morteza</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <xref ref-type="aff" rid="a3">3</xref>
                    <xref ref-type="aff" rid="a4">4</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Ghodsi</surname>
                        <given-names>Zahra</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Project Administration</role>
                    <role content-type="http://credit.niso.org/">Supervision</role>
                    <xref ref-type="aff" rid="a1">1</xref>
                    <xref ref-type="aff" rid="a5">5</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Mahmoodi</surname>
                        <given-names>Narges</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Validation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <xref ref-type="aff" rid="a1">1</xref>
                    <xref ref-type="aff" rid="a6">6</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Shool</surname>
                        <given-names>Sina</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <xref ref-type="aff" rid="a1">1</xref>
                    <xref ref-type="aff" rid="a7">7</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Kargar-Soleimanabad</surname>
                        <given-names>Saeed</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <uri content-type="orcid">https://orcid.org/0000-0001-5602-3816</uri>
                    <xref ref-type="aff" rid="a1">1</xref>
                    <xref ref-type="aff" rid="a8">8</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Yazdanpanah</surname>
                        <given-names>Niloufar</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <xref ref-type="aff" rid="a9">9</xref>
                    <xref ref-type="aff" rid="a10">10</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Vaccaro</surname>
                        <given-names>Alexander R.</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <xref ref-type="aff" rid="a11">11</xref>
                </contrib>
                <contrib contrib-type="author" corresp="yes">
                    <name>
                        <surname>Rahimi-Movaghar</surname>
                        <given-names>Vafa</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Supervision</role>
                    <role content-type="http://credit.niso.org/">Validation</role>
                    <uri content-type="orcid">https://orcid.org/0000-0001-9086-7318</uri>
                    <xref ref-type="corresp" rid="c1">a</xref>
                    <xref ref-type="aff" rid="a1">1</xref>
                    <xref ref-type="aff" rid="a5">5</xref>
                    <xref ref-type="aff" rid="a12">12</xref>
                    <xref ref-type="aff" rid="a13">13</xref>
                    <xref ref-type="aff" rid="a14">14</xref>
                    <xref ref-type="aff" rid="a15">15</xref>
                </contrib>
                <aff id="a1">
                    <label>1</label>Sina Trauma and Surgery Research Center, Tehran University of Medical Sciences,, Tehran, Iran</aff>
                <aff id="a2">
                    <label>2</label>Cellular and Molecular Research Center &amp; Department of Physiology, School of Medicine, Guilan University of Medical Sciences, Rasht, Iran</aff>
                <aff id="a3">
                    <label>3</label>Metabolic Disorders Research Center, Endocrinology and Metabolism Molecular&#x2011;Cellular Sciences Institute, Tehran University of Medical Sciences, Tehran, Iran</aff>
                <aff id="a4">
                    <label>4</label>Endocrinology and Metabolism Research Center, Endocrinology and Metabolism Clinical Sciences Institute, Tehran University of Medical Sciences, Tehran, Iran</aff>
                <aff id="a5">
                    <label>5</label>Brain and Spinal Cord Injury Research Center, Neuroscience Institute, Tehran University of Medical Sciences, Tehran, Iran</aff>
                <aff id="a6">
                    <label>6</label>Department of Tissue Engineering, School of Advanced Technologies in Medicine, Tehran University of Medical Sciences, Tehran, Iran</aff>
                <aff id="a7">
                    <label>7</label>Faculty of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran</aff>
                <aff id="a8">
                    <label>8</label>Student Research Committee, Mazandaran University of Medical Sciences, Sari, Iran</aff>
                <aff id="a9">
                    <label>9</label>School of Medicine, Tehran University of Medical Sciences, Tehran, Iran</aff>
                <aff id="a10">
                    <label>10</label>Network of Immunity in Infection, Malignancy and Autoimmunity (NIIMA), Universal Scientific Education and Research Network (USERN), Tehran, Iran</aff>
                <aff id="a11">
                    <label>11</label>Department of Orthopedics and Neurosurgery, Thomas Jefferson University and the Rothman Institute, Philadelphia, Pennsylvania, USA</aff>
                <aff id="a12">
                    <label>12</label>Department of Neurosurgery, Shariati Hospital, Tehran University of Medical Sciences, Tehran, Iran</aff>
                <aff id="a13">
                    <label>13</label>Universal Scientific Education and Research Network (USERN), Tehran, Iran</aff>
                <aff id="a14">
                    <label>14</label>Institute of Biochemistry and Biophysics, University of Tehran, Tehran, Iran</aff>
                <aff id="a15">
                    <label>15</label>Spine Program, University of Toronto, Toronto, Canada</aff>
            </contrib-group>
            <author-notes>
                <corresp id="c1">
                    <label>a</label>
                    <email xlink:href="mailto:v_rahimi@sina.tums.ac.ir">v_rahimi@sina.tums.ac.ir</email>
                </corresp>
                <fn fn-type="conflict">
                    <p>
                        <bold>Competing interests: </bold>Alexander R. Vaccaro is a board member of AOSpine, Innovative Surgical Design, Association of Collaborative Spine Research, DePuy; Consultant at Medtronics, Stryker Spine, Globus, Stout Medical, Gerson Lehrman Group, Guidepoint Global, Medacorp, Innovative Surgical Design, Orthobullets, Ellipse, Vertex, Medtronics; Royalty at Stryker Spine, Biomet Spine, Globus, Aesculap, Thieme, Jaypee, Elsevier, Taylor Francis. All remaining authors declare that they have no financial or non-financial/personal conflict exists and also no commercial associations that might pose a conflict of interest in connection with the submitted article.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>7</day>
                <month>1</month>
                <year>2022</year>
            </pub-date>
            <pub-date pub-type="collection">
                <year>2022</year>
            </pub-date>
            <volume>11</volume>
            <elocation-id>16</elocation-id>
            <history>
                <date date-type="accepted">
                    <day>14</day>
                    <month>12</month>
                    <year>2021</year>
                </date>
            </history>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2022 Mojtabavi K et al.</copyright-statement>
                <copyright-year>2022</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <self-uri content-type="pdf" xlink:href="https://f1000research.com/articles/11-16/pdf"/>
            <abstract>
                <p>
                    <italic toggle="yes">
                        <bold>Background:</bold>
                    </italic> In many cases, central nervous system (CNS) injury is unchanging due to the absence of neuronal regeneration and repair capabilities. In recent years, regenerative medicine, and especially hydrogels, has reached a significant amount of attention for their promising results for the treatment of spinal cord injury (SCI) currently considered permanent. Hydrogels are categorized based on their foundation: synthetic, natural, and combination. The objective of this study was to compare the properties and efficacy of commonly used hydrogels, like collagen, and other natural peptides with synthetic self-assembling peptide hydrogels in the treatment of SCI.</p>
                <p>
                    <italic toggle="yes">
                        <bold>Methods</bold>
                    </italic>: Articles were searched in PubMed, Scopus, Web of Science, and Embase. All studies from 1985 until January 2020 were included in the primary search. Eligible articles were included based on the following criteria: administering hydrogels (both natural and synthetic) for SCI treatment, solely focusing on spinal cord injury treatment, and published in a peer-reviewed journal. Data on axonal regeneration, revascularization, elasticity, drug delivery efficacy, and porosity were extracted.</p>
                <p>
                    <italic toggle="yes">
                        <bold>Results:</bold>
                    </italic> A total of 24 articles were included for full-text review and data extraction. There was only one experimental study comparing collagen I (natural hydrogel) and polyethylene glycol (PEG) in an 
                    <italic toggle="yes">in vitro</italic> setting. The included study suggested the behavior of cells with PEG is more expectable in the injury site, which makes it a more reliable scaffold for neurites.</p>
                <p>
                    <italic toggle="yes">
                        <bold>Conclusions:</bold>
                    </italic> There is limited research comparing and evaluating both types of natural and self-assembling peptides (SAPs) in the same animal or 
                    <italic toggle="yes">in vitro</italic> study, despite its importance. Although we assume that the remodeling of natural scaffolds may lead to a stable hydrogel, there was not a definitive conclusion that synthetic hydrogels are more beneficial than natural hydrogels in neuronal regeneration.</p>
            </abstract>
            <kwd-group kwd-group-type="author">
                <kwd>Hydrogels</kwd>
                <kwd>Collagen</kwd>
                <kwd>Peptides</kwd>
                <kwd>Spinal cord Injuries</kwd>
                <kwd>Systematic review</kwd>
            </kwd-group>
            <funding-group>
                <award-group id="fund-1" xlink:href="http://dx.doi.org/10.13039/501100004484">
                    <funding-source>Tehran University of Medical Sciences and Health Services</funding-source>
                    <award-id>99-1-101-47039</award-id>
                </award-group>
                <funding-statement>This work was supported by Sina Trauma and Surgery Research Center, Tehran University of Medical Sciences [99-1-101-47039].</funding-statement>
                <funding-statement>
                    <italic>The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.</italic>
                </funding-statement>
            </funding-group>
        </article-meta>
    </front>
    <body>
        <sec id="sec1" sec-type="intro">
            <title>Introduction</title>
            <p>Injuries to the central nervous system (CNS) are challenging to rehabilitate. In the absence of neuronal regeneration and repair capabilities, the damage and resulting complications are permanent in many cases. There have not been any new treatments for spinal cord injury (SCI) in the past decade, and many studies in molecular medicine currently consider some spinal cord conditions as untreatable.
                <sup>
                    <xref ref-type="bibr" rid="ref1">1</xref>
                </sup>
            </p>
            <p>A permissive growth substrate is critical to promote regeneration at the injury site.
                <sup>
                    <xref ref-type="bibr" rid="ref2">2</xref>
                </sup> Many types of research have been conducted to advance and evaluate different natural and synthetic hydrogel systems,
                <sup>
                    <xref ref-type="bibr" rid="ref3">3</xref>
                </sup> such as polysaccharides,
                <sup>
                    <xref ref-type="bibr" rid="ref4">4</xref>
                </sup>
                <sup>,</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref5">5</xref>
                </sup> synthetic polymers,
                <sup>
                    <xref ref-type="bibr" rid="ref6">6</xref>
                </sup> proteins,
                <sup>
                    <xref ref-type="bibr" rid="ref7">7</xref>
                </sup> peptides,
                <sup>
                    <xref ref-type="bibr" rid="ref8">8</xref>
                </sup> and its derivatives.
                <sup>
                    <xref ref-type="bibr" rid="ref9">9</xref>
                </sup>
                <sup>&#x2013;</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref11">11</xref>
                </sup>
            </p>
            <p>Hydrogels are categorized as natural and synthetic structures with properties for extensive water absorption and resistance to dissolution.
                <sup>
                    <xref ref-type="bibr" rid="ref12">12</xref>
                </sup> We consider a perfect hydrogel to provide the following features: 1) high absorption capacity, 2) low soluble content and residue, 3) suitable biodegradability based on tissue type and the absence of toxic species formation, 4) local and sustained drug-release, 5) immunologically inert, and 6) substantial cost-benefit.
                <sup>
                    <xref ref-type="bibr" rid="ref12">12</xref>
                </sup>
                <sup>&#x2013;</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref14">14</xref>
                </sup>
            </p>
            <p>Both natural and synthetic hydrogels have different characteristics, and some of them are compatible with the features listed above.</p>
            <p>Self-assembling peptides (SAPs) can spontaneously self-assemble in the aqueous solution to form highly organized structures, such as hydrogels. Due to their great water-holding capacity, outstanding biocompatibility,
                <sup>
                    <xref ref-type="bibr" rid="ref15">15</xref>
                </sup>
                <sup>&#x2013;</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref17">17</xref>
                </sup> and similarities to the native extracellular matrix (ECM),
                <sup>
                    <xref ref-type="bibr" rid="ref18">18</xref>
                </sup> these hydrogels have gained tremendous recognition in recent years. The advantages of these artificial hydrogels are their transmutative characteristics, such as porosity, elasticity, and drug delivery pace.
                <sup>
                    <xref ref-type="bibr" rid="ref19">19</xref>
                </sup>
            </p>
            <p>For a previous project, we asked several distinguished companies in China, Denmark, Canada, and more to design and produce high concentration hydrogels. However, they could not produce SAPs with a desirable concentration percentage for cell culture purposes, which in some cases can be considered as a challenge of providing this type of scaffolds.</p>
            <p>On the other hand, many studies have applied natural hydrogels like collagen-based hydrogel designed based on the Nature Protocols
                <sup>
                    <xref ref-type="bibr" rid="ref20">20</xref>
                </sup> for drug delivery in spinal cord injuries in animals, and the results have been somewhat promising. Due to their soft tissue-like formation characteristics, agarose, alginate, and collagen hydrogels have been acknowledged as likely scaffolds in the CNS and the peripheral nervous system (PNS).
                <sup>
                    <xref ref-type="bibr" rid="ref21">21</xref>
                </sup>
                <sup>&#x2013;</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref23">23</xref>
                </sup> Therefore, we performed this review to determine how these two very different, yet very promising, scaffolds would perform in similar conditions.</p>
        </sec>
        <sec id="sec2" sec-type="method">
            <title>Method</title>
            <sec id="sec3">
                <title>Ethical considerations</title>
                <p>The Ethics Committee of Tehran University of Medical Sciences, approved the study with reference number 99-1-101-388. This systematic review has been conducted according to the PRISMA 2020 Checklist.
                    <sup>
                        <xref ref-type="bibr" rid="ref24">24</xref>
                    </sup>
                    <sup>,</sup>
                    <sup>
                        <xref ref-type="bibr" rid="ref25">25</xref>
                    </sup>
                </p>
            </sec>
            <sec id="sec4">
                <title>Eligibility criteria</title>
                <p>In the review, articles had to meet the following inclusion criteria: 1) administering hydrogels (both natural and synthetic) for SCI treatment, 2) specifically focused on spinal cord injury, and 3) original articles published in a peer-reviewed journal. Exclusion criteria included: 1) studies on injuries other than SCI, 2) studies focusing on only tissue-engineered self-assembling peptides, 3) studies focused only on natural hydrogels.</p>
                <p>There was no limitation of language for included studies.</p>
            </sec>
            <sec id="sec5">
                <title>Electronic searches</title>
                <p>We performed this systematic review to evaluate axonal regeneration, revascularization, porosity, elasticity, and drug delivery efficacy of natural and synthetic hydrogels. Our search strategy in different databases utilized Medical Subject Headings (MeSH, from PubMed), Excerpta Medica Tree (Emtree, from Embase), keywords of related articles and reviews, and experts' opinions. A systematic search of the literature was performed on 
                    <ext-link ext-link-type="uri" xlink:href="https://pubmed.ncbi.nlm.nih.gov/">PubMed</ext-link>, 
                    <ext-link ext-link-type="uri" xlink:href="https://www.scopus.com/home.uri">Scopus</ext-link>, 
                    <ext-link ext-link-type="uri" xlink:href="https://access.clarivate.com/login?app=wos&amp;detectSession=true&amp;referrer=TARGET%3Dhttps%253A%252F%252Fwww.webofscience.com%252Fwos%253FInit%253DYes%2526SrcApp%253DCR%2526SID%253DE5hgDL7xpeCUCCTC1h5%26SID%3DE5hgDL7xpeCUCCTC1h5%26detectSessionComplete%3Dtrue">Web of Science</ext-link>, and 
                    <ext-link ext-link-type="uri" xlink:href="https://www.embase.com/">Embase</ext-link> for published articles from 1985 until January 2020. The detailed search syntax is presented in the 
                    <italic toggle="yes">Extended data</italic>.
                    <sup>
                        <xref ref-type="bibr" rid="ref24">24</xref>
                    </sup> We also manually checked the references of primarily included studies and relevant reviews to identify additional relevant articles. After removing duplicate articles, the remaining articles were transferred to an 
                    <ext-link ext-link-type="uri" xlink:href="https://endnote.com/">EndNote</ext-link> file (version X9, Thomson Reuters, USA).</p>
            </sec>
            <sec id="sec6">
                <title>Selection and data collection process</title>
                <p>After eliminating duplicates, the records were divided into two groups. Each group was reviewed by two independent reviewers (in two teams) based on the keywords, and 24 papers were selected eligible for full-text review. The resulting records were then divided again and each full text was reviewed by two independent reviewers (in two teams) for data extraction. Differences of opinion between two reviewers of each team was solved by consultation with the corresponding author.</p>
            </sec>
            <sec id="sec7">
                <title>Data items</title>
                <p>We designed a data collection sheet, and the items below were collected to compare natural and self-assembling hydrogels:
                    <list list-type="bullet">
                        <list-item>
                            <label>&#x2022;</label>
                            <p>Axonal regeneration: The axon (proximal fragment) regrowth from the injury site toward its target following the original pathway.</p>
                        </list-item>
                        <list-item>
                            <label>&#x2022;</label>
                            <p>Revascularization: restoration of the flow of blood to a previously ischemic tissue after a traumatic injury.</p>
                        </list-item>
                        <list-item>
                            <label>&#x2022;</label>
                            <p>Porosity: a fraction of the volume of voids over the total volume. Hydrogel porosity is critical for local angiogenesis and has a substantial effect on the mechanical properties</p>
                        </list-item>
                        <list-item>
                            <label>&#x2022;</label>
                            <p>Elasticity: the ability of a hydrogel to resume its standard shape after implantation.</p>
                        </list-item>
                        <list-item>
                            <label>&#x2022;</label>
                            <p>Invasion/Elongation of astrocytes, fibroblasts, endothelial or Schwann cells</p>
                        </list-item>
                        <list-item>
                            <label>&#x2022;</label>
                            <p>Efficacy of drug delivery</p>
                        </list-item>
                    </list>
                </p>
            </sec>
        </sec>
        <sec id="sec8" sec-type="results">
            <title>Results</title>
            <p>Out of a total number of 2742 identified articles, 2718 records were excluded based on title and abstract screening, and the full text of the remaining 24 records were investigated by the same four reviewers as two review groups. In total, 23 were excluded at this stage and only one record was selected for full-text review (
                <xref ref-type="fig" rid="f1">Figure 1</xref>). Of the 23 articles excluded, 18 were because they did not evaluate a natural hydrogel in their study,
                <sup>
                    <xref ref-type="bibr" rid="ref26">26</xref>
                </sup>
                <sup>&#x2013;</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref43">43</xref>
                </sup> and five because they had not administrated a SAP in the study.
                <sup>
                    <xref ref-type="bibr" rid="ref44">44</xref>
                </sup>
                <sup>&#x2013;</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref48">48</xref>
                </sup>
            </p>
            <fig fig-type="figure" id="f1" orientation="portrait" position="float">
                <label>Figure 1. </label>
                <caption>
                    <title>Flowchart of the article screening process following identification of studies via database search.</title>
                </caption>
                <graphic id="gr1" orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/77802/aad7e405-8d99-44c2-8bef-a51d6c459016_figure1.gif"/>
            </fig>
            <p>According to the single record included (
                <xref ref-type="table" rid="T1">Table 1</xref>), axonal regeneration of the administrated scaffolds was reported individually based on the type and the combination of scaffolds.</p>
            <table-wrap id="T1" orientation="portrait" position="float">
                <label>Table 1. </label>
                <caption>
                    <title>General information of the only one included study.</title>
                </caption>
                <table content-type="article-table" frame="hsides">
                    <thead>
                        <tr>
                            <th align="left" colspan="1" rowspan="1" valign="top">Title</th>
                            <th align="left" colspan="1" rowspan="1" valign="top">First author</th>
                            <th align="left" colspan="1" rowspan="1" valign="top">Year of Study</th>
                            <th align="left" colspan="1" rowspan="1" valign="top">Country</th>
                            <th align="left" colspan="1" rowspan="1" valign="top">Study Characteristics</th>
                            <th align="left" colspan="1" rowspan="1" valign="top">Type of Study</th>
                        </tr>
                    </thead>
                    <tbody>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="middle">Comparison of neurite growth in three dimensional natural and synthetic hydrogels</td>
                            <td align="left" colspan="1" rowspan="1" valign="middle">Wenda Zhou</td>
                            <td align="left" colspan="1" rowspan="1" valign="middle">Aug 2012</td>
                            <td align="left" colspan="1" rowspan="1" valign="middle">United States</td>
                            <td align="left" colspan="1" rowspan="1" valign="middle">Experimental</td>
                            <td align="left" colspan="1" rowspan="1" valign="middle">
                                <italic toggle="yes">In Vitro</italic>
                            </td>
                        </tr>
                    </tbody>
                </table>
            </table-wrap>
            <p>In this study, with the addition of fibronectin (FN) at various concentrations to PEG gels, and collagen I in various concentrations and stiffness, cell behavior and axonal regeneration were investigated in an 
                <italic toggle="yes">in vitro</italic> environment shown in 
                <xref ref-type="table" rid="T2">Table 2</xref>. The article found that adding FN to collagen has a biphasic response due to specific interactions in collagen and the growing neurites, contrary to PEG, which has a more expectable behavior regarding the FN addition within the graft.</p>
            <table-wrap id="T2" orientation="portrait" position="float">
                <label>Table 2. </label>
                <caption>
                    <title>Axonal regeneration and elasticity of scaffold.</title>
                </caption>
                <table content-type="article-table" frame="hsides">
                    <thead>
                        <tr>
                            <th align="left" colspan="1" rowspan="1" valign="top">Results
                                <break/>Type of Scaffold</th>
                            <th align="left" colspan="1" rowspan="1" valign="top">Neurite lengths grow</th>
                            <th align="left" colspan="1" rowspan="1" valign="top">Elasticity</th>
                        </tr>
                    </thead>
                    <tbody>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">3% PEG + 0 &#x03bc;g/ml FN, 90</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 90 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10
                                <sup>^2</sup> Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">3% PEG + 1 &#x03bc;g/ml FN, 95</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 95 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10
                                <sup>^2</sup> Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">3% PEG + 10 &#x03bc;g/ml FN, 130</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 130 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10
                                <sup>^2</sup> Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">3% PEG + 100 &#x03bc;g/ml FN, 145</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 145 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10
                                <sup>^2</sup> Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">4% PEG + 0 &#x03bc;g/ml FN, 80</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 80 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10
                                <sup>^3</sup> Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">4% PEG + 1 &#x03bc;g/ml FN, 110</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 110 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10
                                <sup>^3</sup> Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">4% PEG + 10 &#x03bc;g/ml FN, 130</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 130 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10
                                <sup>^3</sup> Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">4% PEG + 100 &#x03bc;g/ml FN, 135</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 135 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10
                                <sup>^3</sup> Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">5% PEG + 0 &#x03bc;g/ml FN, 85</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 85 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 10
                                <sup>^3</sup> Pa</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">5% PEG + 1 &#x03bc;g/ml FN, 90</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 90 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 10
                                <sup>^3</sup> Pa</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">5% PEG + 10 &#x03bc;g/ml FN, 100</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 100 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 10
                                <sup>^3</sup> Pa</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">5% PEG + 100 &#x03bc;g/ml FN, 125</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 125 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 10
                                <sup>^3</sup> Pa</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">0.4 mg/ml Col. + 0 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 187 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10 Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">0.4 mg/ml Col. + 1 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 160 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10 Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">0.4 mg/ml Col. + 10 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 165 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10 Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">0.4 mg/ml Col. + 100 &#x03bc;g/ml FN</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 155 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10 Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">0.6 mg/ml Col. + 0 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 200 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10 Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">0.6 mg/ml Col. + 1 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 187 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10 Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">0.6 mg/ml Col. + 10 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 185 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10 Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">0.6 mg/ml Col. + 100 &#x03bc;g/ml FN</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 155 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10 Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">0.8 mg/ml Col. + 0 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 168 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10 Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">0.8 mg/ml Col. + 1 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 180 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10 Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">0.8 mg/ml Col. + 10 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 190 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10 Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">0.8 mg/ml Col. + 100 &#x03bc;g/ml FN</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 165 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10 Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">1 mg/ml Col. + 0 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 160 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10 Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">1 mg/ml Col. + 1 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 168 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10 Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">1 mg/ml Col. + 10 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 195 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10 Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">1 mg/ml Col. + 100 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 185 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10 Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">1.25 mg/ml Col. + 0 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 160 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 10 Pa</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">1.25 mg/ml Col. + 1 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 185 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10 Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">1.25 mg/ml Col. + 10 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 178 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10 Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">1.25 mg/ml Col. + 100 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 180 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10 Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">1.5 mg/ml Col. + 0 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 180 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10
                                <sup>^2</sup> Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">1.5 mg/ml Col. + 1 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 188 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10
                                <sup>^2</sup> Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">1.5 mg/ml Col. + 10 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 185 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10
                                <sup>^2</sup> Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">1.5 mg/ml Col. + 100 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 188 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10
                                <sup>^2</sup> Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">2 mg/ml Col. + 0 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 155 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10
                                <sup>^2</sup> Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">2 mg/ml Col. + 1 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 175 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10
                                <sup>^2</sup> Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">2 mg/ml Col. + 10 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 175 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10
                                <sup>^2</sup> Pa&gt;</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="top">2 mg/ml Col. + 100 &#x03bc;g/ml FN,</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">&#x2243; 158 &#x03bc;m</td>
                            <td align="left" colspan="1" rowspan="1" valign="top">10
                                <sup>^2</sup> Pa&gt;</td>
                        </tr>
                    </tbody>
                </table>
            </table-wrap>
            <p>PEG gels were examined at 3%, 4%, and 5% concentration with 0, 1, 10, 100 &#x03bc;g/ml FN added; 3% PEG+ 100 &#x03bc;g/ml FN presented the most significant neurite length growth by 145 &#x03bc;m. It is also worth remarking that adding any concentrations of FN to PEG gels had a positive effect on axonal regeneration than PEG gels with no FN added.</p>
            <p>Collagen I was examined at 0.4-2 mg/ml concentrations with 0, 1, 10, 100 &#x03bc;g/ml FN added; As mentioned above, the addition of FN had a biphasic response in collagen, with reducing neurite growth length in lower concentrations (0.4-0.6 mg/ml) compared to collagens with no FN, while increasing neurites length in mid and high collagen concentrations (1.0-2.0 mg/ml).</p>
            <p>While the addition of FN impacted the overall growth within the different gels, there were no differences noted in viability with increasing FN concentrations. No differences were found between PEG gel concentrations. Moreover, cells within collagen gels had higher viability overall.</p>
        </sec>
        <sec id="sec9" sec-type="discussion">
            <title>Discussion</title>
            <p>We believe biomaterials and natural hydrogels are expected to not dissolve quickly and remain for a long time when injected into the injured spinal cord whilst directly delivering drugs into it, and render a sufficient environment for axonal regeneration and revascularization of the damaged tissues. Also, these scaffolds help with the need for a physical matrix to which neurons and endogenous repairing cells can adhere.
                <sup>
                    <xref ref-type="bibr" rid="ref49">49</xref>
                </sup>
            </p>
            <p>In this regard, designing a hydrogel must meet some fundamental principles, such as biocompatibility, so it does not trigger an immune response from the host
                <sup>
                    <xref ref-type="bibr" rid="ref49">49</xref>
                </sup>; specifically designed mechanical and physicochemical characteristics allow both spinal cord stabilization and cell adherence and growth.
                <sup>
                    <xref ref-type="bibr" rid="ref26">26</xref>
                </sup>
            </p>
            <p>The biodegradability of these materials must be considered, and the biomaterial degrades as new tissue grows, mimicking the natural mechanisms of breakdown and synthesis of ECM in the natural tissue.
                <sup>
                    <xref ref-type="bibr" rid="ref50">50</xref>
                </sup>
                <sup>&#x2013;</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref54">54</xref>
                </sup>
            </p>
            <p>In a previous study, Merchand et al. used collagen as scaffolds to fill the gap transected in the spinal cord of Sprague-Dawley rats, and extended the stability of collagen (2-3 months) by adding a cross-linking agent to the gel which helped axonal regrowth over a six months' timeline.
                <sup>
                    <xref ref-type="bibr" rid="ref56">56</xref>
                </sup>
            </p>
            <p>The biocompatibility characteristics of natural hydrogels allow for cell adhesion and migration.
                <sup>
                    <xref ref-type="bibr" rid="ref57">57</xref>
                </sup> Moreover, not only can natural hydrogels be used to bridge the gap in the lesion site for cell regeneration, but they are also considered for sustained drug delivery.
                <sup>
                    <xref ref-type="bibr" rid="ref58">58</xref>
                </sup>
            </p>
            <p>However, synthetic hydrogels, such as poly (hydroxyethyl methacrylate) (PHEMA) based hydrogels, are favorites for the treatment of SCI and drug delivery to the lesion site due to their ability to be mass produced and their ability to have their properties modified.
                <sup>
                    <xref ref-type="bibr" rid="ref59">59</xref>
                </sup>
            </p>
            <p>Our study indeed had some limitations. Regenerative studies for SCI primarily focus on different characteristics of one specific type of hydrogel and, comparing different features of these types of hydrogels were completely overlooked, or if these two types of hydrogels are used together in a study, it is in the form of a new combinatorial hydrogel scaffold.</p>
            <p>There are no definitive findings regarding synthetic hydrogels' advantage over natural hydrogels in SCI treatment in animals or humans. Still, there might be some inadequate shreds of evidence to report that one of these types has an advantage over the other. However, more studies with the specific objective to compare synthetic and natural hydrogels is necessary to find their advantages and disadvantages in a mutual condition. Until then, both synthetic and natural scaffolds are in the race for the ultimate scaffolds.</p>
            <p>This study sheds light on a notable absence of evaluation following our objectives and intentions performing this review.</p>
        </sec>
        <sec id="sec10" sec-type="conclusion">
            <title>Conclusion</title>
            <p>We assume that remodeling natural scaffolds may lead to sensible axonal regeneration, progress such as reducing the scar tissue, and a stable graft at the injury site; however, there was not a definite evidence regarding the benefits of neuronal regeneration in synthetic hydrogels compared to natural hydrogels.</p>
        </sec>
        <sec id="sec11">
            <title>Data availability</title>
            <sec id="sec12">
                <title>Underlying data</title>
                <p>All data underlying the results are available as part of the article and no additional source data are required.</p>
            </sec>
            <sec id="sec13">
                <title>Extended data</title>
                <p>
                    <bold>Zenodo:</bold> Comparing natural hydrogels to self-assembling peptides in spinal cord injury treatment: a systematic review. 
                    <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.5281/zenodo.5759312">https://doi.org/10.5281/zenodo.5759312</ext-link>.
                    <sup>
                        <xref ref-type="bibr" rid="ref25">25</xref>
                    </sup>
                </p>
                <p>This project contains the following extended data:
                    <list list-type="bullet">
                        <list-item>
                            <label>-</label>
                            <p>search strategy.docx</p>
                        </list-item>
                    </list>
                </p>
            </sec>
            <sec id="sec14">
                <title>Reporting guidelines</title>
                <p>Zenodo: PRISMA checklist for &#x2018;Comparing natural hydrogels to self-assembling peptides in spinal cord injury treatment: a systematic review&#x2019;. 
                    <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.5281/zenodo.5759312">https://doi.org/10.5281/zenodo.5759312</ext-link>.
                    <sup>
                        <xref ref-type="bibr" rid="ref25">25</xref>
                    </sup>
                </p>
                <p>Data are available under the terms of the Data are available under the terms of the 
                    <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution 4.0 International license</ext-link> (CC-BY 4.0).</p>
            </sec>
        </sec>
        <sec id="sec19">
            <title>Grant information</title>
            <p>This work was supported by Sina Trauma and Surgery Research Center, Tehran University of Medical Sciences. The grant number is 99-1-101-47039.</p>
        </sec>
    </body>
    <back>
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    <sub-article article-type="reviewer-report" id="report321115">
        <front-stub>
            <article-id pub-id-type="doi">10.5256/f1000research.77802.r321115</article-id>
            <title-group>
                <article-title>Reviewer response for version 1</article-title>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author">
                    <name>
                        <surname>Hodgetts</surname>
                        <given-names>Stuart I.</given-names>
                    </name>
                    <xref ref-type="aff" rid="r321115a2">2</xref>
                    <xref ref-type="aff" rid="r321115a1">1</xref>
                    <role>Referee</role>
                    <uri content-type="orcid">https://orcid.org/0000-0002-3318-0410</uri>
                </contrib>
                <contrib contrib-type="author">
                    <name>
                        <surname>Drew</surname>
                        <given-names>Isabella</given-names>
                    </name>
                    <xref ref-type="aff" rid="r321115a1">1</xref>
                    <role>Co-referee</role>
                    <uri content-type="orcid">https://orcid.org/0009-0000-8967-608X</uri>
                </contrib>
                <aff id="r321115a1">
                    <label>1</label>School of Human Sciences, The University of Western Australia School of Biological Sciences, Perth, Western Australia, Australia</aff>
                <aff id="r321115a2">
                    <label>2</label>Perron Institute for Neurological and Translational Science, Perth, WA, Australia</aff>
            </contrib-group>
            <author-notes>
                <fn fn-type="conflict">
                    <p>
                        <bold>Competing interests: </bold>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>11</day>
                <month>10</month>
                <year>2024</year>
            </pub-date>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2024 Drew I and Hodgetts SI</copyright-statement>
                <copyright-year>2024</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access peer review report distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <related-article ext-link-type="doi" id="relatedArticleReport321115" related-article-type="peer-reviewed-article" xlink:href="10.12688/f1000research.74087.1"/>
            <custom-meta-group>
                <custom-meta>
                    <meta-name>recommendation</meta-name>
                    <meta-value>reject</meta-value>
                </custom-meta>
            </custom-meta-group>
        </front-stub>
        <body>
            <p>
                <bold>Review of Mojtabavi et al &#x2013; 2024</bold>&#x00a0;</p>
            <p> </p>
            <p> 
                <bold>Stuart Hodgetts</bold> and 
                <bold>Isabella Drew</bold> (PhD student)</p>
            <p> </p>
            <p> 
                <italic>&#x201c;SYSTEMATIC REVIEW Comparing natural hydrogels to self-assembling peptides in spinal cord injury treatment: a systematic review.&#x201d;</italic>
            </p>
            <p> </p>
            <p> 
                <bold>
                    <underline>1) Review by Stuart Hodgetts</underline>
                </bold>
            </p>
            <p> The systematic review was first received in January 2022.&#x00a0; Its original aims were &#x201c;
                <italic>to compare the properties and efficacy of commonly used hydrogels, like collagen, and other natural peptides with synthetic self-assembling peptide hydrogels in the treatment of SCI</italic>&#x201d;.&#x00a0; After applying the inclusion and exclusion criteria, only one paper was considered for analysis.&#x00a0; The result is therefore NOT a systematic review of these hydrogels in the treatment SCI, because the single paper was in fact only an in vitro study &#x2013; and is not applicable to any in vivo comparison, since no animal models of SCI were used to test the scaffolds. This single paper effectively was a comparison of neurite outgrowth in varying concentrations of fibronectin added to different concentrations of PEG or collagen-based gels. This manuscript does very little than offer a very superficial precis of a single published study that by itself provides more information than the review offered here.&#x00a0; It is therefore unclear what benefit or contribution this review makes to the field.</p>
            <p> There appears to be no attempt to include, or at the very least make mention of, any updates the total number of manuscripts that might be included since 2022.&#x00a0; Therefore, its relevance nearly 3 years on comes under question.&#x00a0; A recent systematic review El Husseiny et al 2024 [Ref - 1] appears to hold more relevance in terms of final comparisons (El-Husseiny et al 2024 - International Journal of Biological Macromolecules 260 (2024) 129323).&#x00a0; Additionally, the senior author Rahimi-Movaghar also published in 2022 a systematic review and meta-analysis comparing the &#x201c;Efficacy of hydrogels for repair of traumatic spinal cord&#x201d; [Ref - 2] in Biomed Mater Res, which was an informative and timely publication. The Mojtabavi et al submission does little to promote the field forward, and would benefit from waiting until future studies that fit the selection criteria provide a more informative narrative.</p>
            <p> </p>
            <p> 
                <bold>Specific comments:</bold>
            </p>
            <p> 
                <bold>Introduction</bold>
            </p>
            <p> &#x201c;
                <italic>There have not been any new treatments for spinal cord injury (SCI) in the past decade, and many studies in molecular medicine currently consider some spinal cord conditions as untreatable</italic>&#x201d;.&#x00a0; Specify biological treatments? What about exoskeletons? Electrical spinal stimulation to bridge circuitry?</p>
            <p> </p>
            <p> &#x201c;
                <italic>For a previous project, we asked several distinguished companies in China, Denmark, Canada, and more to design and produce high concentration hydrogels. However, they could not produce SAPs with a desirable concentration percentage for cell culture purposes, which in some cases can be considered as a challenge of providing this type of scaffolds</italic>.&#x201d; Relevance? Why was cell culture the directive here?</p>
            <p> </p>
            <p> 
                <bold>Methods</bold>
            </p>
            <p> I was unable to find a statement regarding updates since 2022.</p>
            <p> I would suggest the authors to add information or statement whether the criteria included searches for both pre clinal and clinical studies (i.e. 
                <ext-link ext-link-type="uri" xlink:href="https://clinicaltrials.gov/">https://clinicaltrials.gov/</ext-link>), or a specific stage of spinal cord injuries: immediate, acute, subacute, chronic.</p>
            <p> </p>
            <p> 
                <bold>Results</bold>
            </p>
            <p> &#x201c;
                <italic>In this study, with the addition of fibronectin (FN) at various concentrations to PEG gels, and collagen I in various concentrations and stiffness, cell behavior and axonal regeneration were investigated in an in vitro environment shown in Table 2</italic>.&#x201d; How many studies compare these types of hydrogels simply in vitro....with no SCI requirements?&#x00a0; How does the single paper in this review make the comparison relevant (inclusive) for SCI?</p>
            <p> </p>
            <p> 
                <bold>Discussion</bold>
            </p>
            <p> &#x201c;
                <italic>We believe biomaterials and natural hydrogels are expected to not dissolve quickly and remain for a long time when injected into the injured spinal cord whilst directly delivering drugs into it, and render a sufficient environment for axonal</italic>&#x201d;.&#x00a0; Why? What is your evidence for this?&#x00a0; &#x201c;sufficient environment&#x201d;&#x2026;This seems a bit vague. Can the authors please clarify what do they wish to convey exactly here. Hydrogels alter the local environment but the vast majority of studies show little if any benefit to substantive regeneration and/or regrowth, and very few if any link them to specific functional improvements/outcomes.</p>
            <p> </p>
            <p> &#x201c;
                <italic>Also, these scaffolds help with the need for a physical matrix to which neurons and endogenous repairing cells can adhere</italic>.&#x201d;&#x00a0; What are these &#x201c;types of endogenous&#x201d; cells - Kindly describe here.</p>
            <p> </p>
            <p> &#x201c;
                <italic>The biodegradability of these materials must be considered, and the biomaterial degrades as new tissue grows, mimicking the natural mechanisms of breakdown and synthesis of ECM in the natural tissue</italic>&#x201d;&#x00a0; It was stated above that you believe they should &#x201c;remain for a long time&#x201d; - what is the optimum time for this (e.g. rodent vs human SCI...? acute vs chronic?)</p>
            <p> </p>
            <p> &#x201c;
                <italic>Still, there might be some 
                    <bold>inadequate shreds of evidence</bold> to report that one of these types has an advantage over the other.</italic>&#x201d;&#x00a0; The highlighted term again seems a bit vague. Can the authors please clarify specifically what do they mean exactly here.</p>
            <p> </p>
            <p> In summary, this systematic review effectively highlights the lack of literature comparing natural and synthetic hydrogels for spinal cord injury repair.&#x00a0; Whether this warrants indexing as a peer reviewed manuscript is questionable.</p>
            <p> Please also see highlighted pdf document with highlighted concerns/changes by clicking on this link -</p>
            <p> </p>
            <p> 
                <ext-link ext-link-type="uri" xlink:href="https://f1000research.s3.amazonaws.com/linked/682333.Mojtabavi_et_al_2024_Comparing_natural_hydrogels_to_self_assembling_peptides_in_SCI_treatment_a_systematic_review_highlighted_suggestions.pdf">https://f1000research.s3.amazonaws.com/linked/682333.Mojtabavi_et_al_2024_Comparing_natural_hydrogels_to_self_assembling_peptides_in_SCI_treatment_a_systematic_review_highlighted_suggestions.pdf</ext-link>&#x00a0;</p>
            <p> </p>
            <p> Recommendation: Not approved</p>
            <p> </p>
            <p> 
                <bold>
                    <underline>2) Supplementary Review (invited) by PhD student Isabella Drew:</underline>
                </bold>
            </p>
            <p> </p>
            <p> 
                <bold>Not approved </bold>
                <italic>(Maybe approved with reservations)</italic>
            </p>
            <p> </p>
            <p> The systematic review aims to highlight the lack of studies comparing natural and synthetic hydrogel material for spinal cord injuries. Through their inclusion and exclusion criteria, only one paper was approved for analysis, which explored how varying concentrations of fibronectin added to different concentrations of PEG or collagen-based gels influenced neurite outgrowth. While it is important to address the lack of studies on this topic, I believe it is difficult to answer their research question from one article, and this manuscript may benefit from the following suggestions.</p>
            <p> </p>
            <p> 
                <bold>Minor improvements </bold>
            </p>
            <p> It is important that every sentence is referenced, and to ensure that each source at the end is included in the text, as reference 55 is not cited. To improve the flow of the review, I recommend the following: 
                <list list-type="bullet">
                    <list-item>
                        <p>Ensure that you are consistent with your acronyms as you interchange between &#x201c;spinal cord injuries&#x201d; and &#x201c;SCI&#x201d;</p>
                    </list-item>
                    <list-item>
                        <p>The way some sentences are written interrupt with the flow and readability of the review</p>
                    </list-item>
                    <list-item>
                        <p>Some paragraphs are a sentence in length, and could be joined to the previous or subsequent paragraph</p>
                    </list-item>
                </list> </p>
            <p> 
                <italic>Methods</italic>
            </p>
            <p> The inclusion and exclusion criteria may benefit from including more detail, such as whether the authors searched for both pre clinal and clinical studies, or a specific stage of spinal cord injuries: immediate, acute, subacute, chronic.</p>
            <p> </p>
            <p> 
                <bold>Major improvements </bold>
            </p>
            <p> Since only one paper was included in the systematic analysis, the following suggests may aid in strengthening the overall message.</p>
            <p> </p>
            <p> 
                <italic>Introduction</italic>
            </p>
            <p> While the authors explain that a permissive growth substrate is critical for regeneration at the injury site, and state the beneficial characteristics of both natural and synthetic hydrogels, an elaboration on this would provide sufficient context for the review. Specifically, instead of stating they &#x201c;have gained tremendous recognition&#x201d;, explain why this is the case and specific outcomes in relation to your data collection criteria i.e. axonal regeneration, revascularisation, invasion/elongation of astrocytes.&#x00a0; I believe this is pertinent to strengthen your argument that more comparative studies need to be conducted to progress this therapy, if the audience understands their therapeutic potential that has been supported by primary articles. If the authors are limited by word count, then removing the second last paragraph could address this concern.</p>
            <p> </p>
            <p> 
                <italic>Results</italic>
            </p>
            <p> The authors only address one of 6 data items stated in their methods: axonal regeneration. If the paper approved for analysis only contained information on a 6
                <sup>th</sup> of the data collection criteria, then it raises questions as to whether the methods (search and analysis criteria) need alteration. Additionally, this section seems a bit vague and would benefit from more elaboration such as &#x201c;specific interactions in collagen&#x201d; and &#x201c;more expectable behaviour&#x201d; in the third paragraph.</p>
            <p> </p>
            <p> 
                <italic>Discussion</italic>
            </p>
            <p> The synthesis of the included article reads more like a summary. The fact that only one paper has conducted a comparative analysis can be utilised to strengthen the argument if the authors refrain from utilising the current passive tone. There needs to be more analysis on the included paper.</p>
            <p> </p>
            <p> In conclusion, the systematic review effectively highlights the lack of literature comparing natural and synthetic hydrogels for spinal cord injury repair. Although, since only one article was included in the results section, if the authors haven't provide a more in-depth analysis, it may be best written as a narrative review.</p>
            <p>Are the rationale for, and objectives of, the Systematic Review clearly stated?</p>
            <p>Yes</p>
            <p>Is the statistical analysis and its interpretation appropriate?</p>
            <p>Not applicable</p>
            <p>If this is a Living Systematic Review, is the &#x2018;living&#x2019; method appropriate and is the search schedule clearly defined and justified? (&#x2018;Living Systematic Review&#x2019; or a variation of this term should be included in the title.)</p>
            <p>Not applicable</p>
            <p>Are sufficient details of the methods and analysis provided to allow replication by others?</p>
            <p>Partly</p>
            <p>Are the conclusions drawn adequately supported by the results presented in the review?</p>
            <p>Yes</p>
            <p>Reviewer Expertise:</p>
            <p>Spinal Cord Injury repair (including hydrogels and SAPs)</p>
            <p>We confirm that we have read this submission and believe that we have an appropriate level of expertise to state that we do not consider it to be of an acceptable scientific standard, for reasons outlined above.</p>
        </body>
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