<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Publishing DTD v1.2 20190208//EN" "http://jats.nlm.nih.gov/publishing/1.2/JATS-journalpublishing1.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" article-type="research-article" dtd-version="1.2" xml:lang="en">
    <front>
        <journal-meta>
            <journal-id journal-id-type="pmc">F1000Research</journal-id>
            <journal-title-group>
                <journal-title>F1000Research</journal-title>
            </journal-title-group>
            <issn pub-type="epub">2046-1402</issn>
            <publisher>
                <publisher-name>F1000 Research Limited</publisher-name>
                <publisher-loc>London, UK</publisher-loc>
            </publisher>
        </journal-meta>
        <article-meta>
            <article-id pub-id-type="doi">10.12688/f1000research.110867.1</article-id>
            <article-categories>
                <subj-group subj-group-type="heading">
                    <subject>Research Article</subject>
                </subj-group>
                <subj-group>
                    <subject>Articles</subject>
                </subj-group>
            </article-categories>
            <title-group>
                <article-title>Bone tissue engineering application on fracture healing with bone defect as assessed through osteocalcin and bone morphogenetic protein-2 (BMP-2) biomarker examination: experimental study on murine models</article-title>
                <fn-group content-type="pub-status">
                    <fn>
                        <p>[version 1; peer review: 2 not approved]</p>
                    </fn>
                </fn-group>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author" corresp="yes">
                    <name>
                        <surname>Sananta</surname>
                        <given-names>Panji</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Resources</role>
                    <role content-type="http://credit.niso.org/">Supervision</role>
                    <uri content-type="orcid">https://orcid.org/0000-0003-1778-6524</uri>
                    <xref ref-type="corresp" rid="c1">a</xref>
                    <xref ref-type="aff" rid="a1">1</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Dradjat</surname>
                        <given-names>Respati Suryanto</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Formal Analysis</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Supervision</role>
                    <role content-type="http://credit.niso.org/">Validation</role>
                    <uri content-type="orcid">https://orcid.org/0000-0001-8880-019X</uri>
                    <xref ref-type="aff" rid="a1">1</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Rosandi</surname>
                        <given-names>Rizqi Daniar</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Investigation</role>
                    <role content-type="http://credit.niso.org/">Project Administration</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <xref ref-type="aff" rid="a1">1</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Sugiarto</surname>
                        <given-names>Muhammad Alwy</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Software</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <uri content-type="orcid">https://orcid.org/0000-0001-8203-7728</uri>
                    <xref ref-type="aff" rid="a1">1</xref>
                </contrib>
                <aff id="a1">
                    <label>1</label>Orthopaedic and Traumatology RSUD dr. Saiful Anwar, Brawijaya University, Malang, East Java, 65111, Indonesia</aff>
            </contrib-group>
            <author-notes>
                <corresp id="c1">
                    <label>a</label>
                    <email xlink:href="mailto:panjisananta@ub.ac.id">panjisananta@ub.ac.id</email>
                </corresp>
                <fn fn-type="conflict">
                    <p>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>1</day>
                <month>6</month>
                <year>2022</year>
            </pub-date>
            <pub-date pub-type="collection">
                <year>2022</year>
            </pub-date>
            <volume>11</volume>
            <elocation-id>596</elocation-id>
            <history>
                <date date-type="accepted">
                    <day>10</day>
                    <month>5</month>
                    <year>2022</year>
                </date>
            </history>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2022 Sananta P et al.</copyright-statement>
                <copyright-year>2022</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <self-uri content-type="pdf" xlink:href="https://f1000research.com/articles/11-596/pdf"/>
            <abstract>
                <p>
                    <bold>Background:</bold> Bone is naturally regenerable, with a high ability to repair itself. In massive segmental bone defect, bone cannot be repaired independently. Therefore, it is necessary to give a bone graft to promote the healing process. To date, autografts are the gold standard for bone grafts. However, some of the reported complications reported have led to auto-bone transplants being often disregarded. Both autografts or allografts also have some issues. Therefore, in an effort to develop alternative treatments for correcting bone defects and their consequences, bone tissue engineering (BTE) has gained popularity and is nowadays being researched as a potential alternative in bone defect management. There are three fundamental components in BTE combined: biomaterials (scaffolds), mesenchymal stem cells (MSCs), and growth factors. The combination of these components is believed to help the healing process of bone defects.</p>
                <p>
                    <bold>Methods:</bold> This work was an animal study involving twenty Wistar strain 
                    <italic toggle="yes">Rattus norvegicus.</italic> They were divided into five groups: negative group (normal rats), positive group (rats with the bone defect without intervention), K-P1 group (rats with bone defect given SVF and porous carbonated- hydroxyapatite (HA)application), K-P2 group (rats with bone defect given SVF and nanocrystalline-HA application) and K-P3 (rats with bone defect giving SVF a bovine-HA application). After 30 days, the rats were sacrificed, the biomarkers osteocalcin and BMP-2 were evaluated. Biomarkers were quantified using ELISA.</p>
                <p>
                    <bold>Results:</bold> Both osteocalcin and BMP-2 biomarker expressions were higher in intervention group (with SVF and scaffolds application) compared to the positive group (with no SVF and scaffolds treatment). The combination of SVF and bovine HA was reported significantly to have the highest osteocalcin and BMP levels when compared with other groups</p>
                <p>
                    <bold>Conclusions:</bold> A combined application of Bone Tissue Engineering (SVF and scaffolds) could aid the healing process in murine models with bone defect, marked by increasing levels of osteocalcin and BMP-2.</p>
            </abstract>
            <kwd-group kwd-group-type="author">
                <kwd>Bone defect</kwd>
                <kwd>SVF</kwd>
                <kwd>Scaffolds; Osteocalcin</kwd>
                <kwd>BMP-2</kwd>
                <kwd>In-vivo study</kwd>
            </kwd-group>
            <funding-group>
                <funding-statement>The author(s) declared that no grants were involved in supporting this work.</funding-statement>
            </funding-group>
        </article-meta>
    </front>
    <body>
        <sec id="sec1" sec-type="intro">
            <title>Introduction</title>
            <p>Bone is naturally regenerable, with a high ability to repair itself, especially in young individuals; this means that most fractures or bone deformities recover spontaneously without requiring a significant intervention.
                <sup>
                    <xref ref-type="bibr" rid="ref1">1</xref>
                </sup>
                <sup>,</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref2">2</xref>
                </sup> Despite bones having some capacity for healing and regeneration, massive segmental bone defects cannot be repaired independently.
                <sup>
                    <xref ref-type="bibr" rid="ref3">3</xref>
                </sup> Therefore, for bone defect conditions, it is necessary to give a bone graft to promote the healing process.
                <sup>
                    <xref ref-type="bibr" rid="ref4">4</xref>
                </sup> In humans, a bone defect occurs when there is a loss of bone components larger than 1 cm in length which contributes to more than 50% of the circumference of the affected bone.
                <sup>
                    <xref ref-type="bibr" rid="ref5">5</xref>
                </sup> In contrast, in animal research objects such as rats, a bone defect is considered when there is a loss of bone components up to 3 mm.
                <sup>
                    <xref ref-type="bibr" rid="ref5">5</xref>
                </sup>
            </p>
            <p>Various bone grafts have been employed to correct these defects, including autografts, allografts, and synthetic grafts.
                <sup>
                    <xref ref-type="bibr" rid="ref6">6</xref>
                </sup> To date, autografts are the gold standard for bone grafts due to their histocompatibility and low risk of hypersensitivity reactions.
                <sup>
                    <xref ref-type="bibr" rid="ref7">7</xref>
                </sup>
                <sup>,</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref8">8</xref>
                </sup> Moreover, autografts also provide the essential parts for osteoconduction (i.e., osteoprogenitor cells, three-dimensional and porous matrix), osteogenesis (i.e., osteoprogenitor cells), and osteoinduction (i.e., bone morphogenetic proteins [BMPs] and other growth factors). Although autografts are a popular graft strategy, they have certain disadvantages, such as donor site morbidity, muscle weakening, risk of infection, bleeding, nerve damage, and function loss.
                <sup>
                    <xref ref-type="bibr" rid="ref9">9</xref>
                </sup>
                <sup>&#x2013;</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref11">11</xref>
                </sup> Another choice for bone substitution is an autologous bone graft.
                <sup>
                    <xref ref-type="bibr" rid="ref12">12</xref>
                </sup> However, the availability of suitable bone is restricted; moreover, harvesting a bone graft is challenging, with a high risk of disease transmission and relatively high cost.
                <sup>
                    <xref ref-type="bibr" rid="ref13">13</xref>
                </sup>
                <sup>,</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref14">14</xref>
                </sup>
            </p>
            <p>Therefore, in an effort to develop alternative treatments for correcting bone defects and their consequences, bone tissue engineering (BTE) has gained popularity and is nowadays being researched as a potential alternative in bone defect management.
                <sup>
                    <xref ref-type="bibr" rid="ref15">15</xref>
                </sup>
                <sup>,</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref16">16</xref>
                </sup> BTE approach is perceived as a preferable solution for bone defect condition due to the healing process being facilitated with the patient&#x2019;s own tissue and provide a good healing process
                <sup>
                    <xref ref-type="bibr" rid="ref15">15</xref>
                </sup>
                <sup>,</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref17">17</xref>
                </sup>
                <sup>,</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref18">18</xref>
                </sup> The BTE theory involves the integration of several collaborating elements: stem cells held together by a three-dimensional biomaterial framework that gives shape and initial mechanical strength, and molecular signals that stimulate progenitor cell differentiation into the osteoblastic phenotype.
                <sup>
                    <xref ref-type="bibr" rid="ref19">19</xref>
                </sup> It can be concluded that there are three combined fundamental components in BTE: biomaterials (scaffolds), mesenchymal stem cells (MSCs), and growth factors.
                <sup>
                    <xref ref-type="bibr" rid="ref20">20</xref>
                </sup>
                <sup>,</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref21">21</xref>
                </sup>
            </p>
            <p>In common tissue engineering procedures, a framework is needed to guide the formation of the tissue formation called a &#x201c;scaffold&#x201d;.
                <sup>
                    <xref ref-type="bibr" rid="ref21">21</xref>
                </sup>
                <sup>,</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref22">22</xref>
                </sup> Scaffolds are made from synthetic or natural biomaterials that facilitate the proliferation, migration, and differentiation of bone cells for bone repair. Scaffolds themselves are made of a variety of biomaterials and synthetic bone substitutes, including collagen, hydroxyapatite (HA), b-tricalcium phosphate (b-TCP), calcium-phosphate cement, as well as glass-ceramics and bovine HA.
                <sup>
                    <xref ref-type="bibr" rid="ref23">23</xref>
                </sup> Other components in BTE include stem cells and growth factors, where both of these components can be found in adipose tissue. Adipose tissue is a multifunctional structure consisting of various cell types, including stromal vascular fraction (SVF) and mature adipocytes. Adult stem cells are abundant and easily extracted from adipose tissue compared to the umbilical cord or bone marrow. The combination of these components is believed to help the healing process of bone defects.
                <sup>
                    <xref ref-type="bibr" rid="ref24">24</xref>
                </sup>
                <sup>&#x2013;</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref26">26</xref>
                </sup> Therefore, this study aimed to observe the effect of bone tissue engineering (SVF and scaffold) in the bone defect healing process based on levels of osteocalcin and BMP-2 
                <italic toggle="yes">in vivo.</italic>
            </p>
        </sec>
        <sec id="sec2" sec-type="methods">
            <title>Methods</title>
            <p>This research was performed from March to December 2020. All protocols were approved by the Ethical Committee of Medical Research Faculty of Medicine Universitas Brawijaya with approval number 160/EC/KEPK &#x2013; PPDS/09/2020, and all subsequent experimental studies followed the ARRIVE guidelines. All animals were housed in certified vivariums under standard procedures with gentle handling, daily cage cleaning, and regular monitoring to avoid animal suffering.</p>
            <sec id="sec3">
                <title>Study design and animal model</title>
                <p>This study was an 
                    <italic toggle="yes">in vivo</italic> experimental research with a randomized posttest-only control group design. The parameters measured in this study resulted from the authors&#x2019; intervention. The research started by identifying rats that had finally passed the inclusion and exclusion criteria. The inclusion criteria for this study consisted of male Wistar rats aged three months, or twelve weeks, with a body weight of 200-280 grams, who were fit, active, clear of limb abnormalities, and had no history of therapy or chemical administration.</p>
                <p>After identifying the 20 experimental animals that met the inclusion criteria, we used the Federer formula to determine the sample size. Then, we used simple random sampling for each group. After identifying the 20 experimental animals that met the inclusion criteria, these rats were separated into five groups consisting of four rats. The groups were categorized as follows: (1) was a negative group that consisted of normal rats without critical bone defect and without SVF or scaffold application; (2) was a positive group which were murine models with bone defect and without SVF or scaffold application. These two groups were control groups. Then, for an experimental group, we divided into three groups: group (3) was named K-P1: murine models with bone defect and giving porous-carbonated HA application; group (4) was named K-P2: murine models with bone defect and treated with nanocrystalline HA applications; and group (5) was K-P3: murine models with bone defects and treated with bovine HA application. These five groups were followed for 30 days to evaluate osteocalcin and BMP-2 biomarker levels.</p>
            </sec>
            <sec id="sec4">
                <title>Stromal vascular fraction construction from adipose tissue</title>
                <p>Five 12-week-old male Wistar strain rats were sacrificed by cervical dislocation procedure. We then put the rats in a supine position. A broad and longitudinal skin incision was done to expose the abdomen of rats. Then, the testicles and the fat surrounding the epididymal and perirenal fat pad were extracted. By severing the innervation of the retroperitoneal fat pad, adipose tissue from perirenal fat was harvested from the epididymal and perirenal fat pad for collection.</p>
                <p>After adipose tissue was obtained, the harvested adipose was washed using a Phosphate-buffered saline (PBS, Sigma-Aldrich, Germany) solution containing a 10% antibiotic-antimycotic solution. The adipose tissue was mashed with a knife. It was then incubated for 30 minutes at 37&#x00b0;C in a 0.075 percent type IA collagenase combination (Sigma-Aldrich) and PBS. After processing the tissue, it was filtered using a 100 mm mesh strainer (Sigma-Aldrich) and centrifuged at 1200 rpm for 10 minutes at 20 &#x00b0;C. The supernatant was removed, leaving a heterogeneous cell suspension with an estimated 2 &#x00d7; 106 cells per gram of adipose tissue</p>
            </sec>
            <sec id="sec5">
                <title>Scaffolding preparation</title>
                <p>Scaffolding is classified into synthetic porous carbonated-HA, nanocrystalline-HA, and bovine xenograft-HA. These three scaffolds are commonly available at Saiful Anwar hospital, making them accessible. In addition, this scaffold is frequently utilized in other research. These three scaffolds were then administered to fractures with bone defects using a measuring spoon to ensure that each mouse model received an equivalent dose.</p>
            </sec>
            <sec id="sec6">
                <title>Preparation procedure for animal models with bone defect and plaster of Paris application</title>
                <p>After seven days of acclimatization, rats in the positive and intervention groups received a bone deformity. Rats were sedated with 100 mg/kg ketamine injection and 10 mg/kg xylazine hydrochloride intraperitoneally preoperatively. The authors confirmed that rats were sedated by extending the extremities and pinching the web between the toes using the pedal reflex technique. If the rat retreated or twitched a muscle and made a noise, the anesthetic was insufficient. After that, they were given an antibiotic injection of 20 mg/kg Cefazolin in the right leg. Then, the operating area was shaved and disinfected with chlorhexidine. The murine was positioned prone on the surgical table and incised over 3-4 cm, gradually deepening the incision until the bone was visible. Osteotomy was performed with a 3mm Kerrison, resulting in a 3mm broad bone defect. After that, the intervention was carried out according to the designated groups. Finally, plaster of Paris was put from the proximal femur to the ankle, with the knee in 90 degrees of flexion. Analgesia was supplied every eight hours (IM 5 mg/kg Ketorolac), and antibiotics, i.e., 20 mg/kg cefazoline were administered intramuscularly 24 hours after surgery. Monitoring was conducted on a daily basis for 30 days.</p>
            </sec>
            <sec id="sec7">
                <title>Laboratory analysis using the ELISA method</title>
                <p>Murine models were sacrificed after 30 days. We collected and then extracted the area of bone defect with callus formation. Osteocalcin and BMP-2 levels were determined using the ELISA technique.
                    <sup>
                        <xref ref-type="bibr" rid="ref27">27</xref>
                    </sup>
                </p>
            </sec>
            <sec id="sec8">
                <title>Statistical analysis</title>
                <p>The first steps of the hypothetical comparative test are followed by the data normality test and variant homogeneity test. If the data collected was homogenous and normally distributed, we used ANOVA. However, if these two criteria are not fulfilled, we used a non-parametric Kruskal-Wallis test with a confidence interval of 95%. After the hypothesis test was performed, we conducted a 
                    <italic toggle="yes">post hoc</italic> test to evaluate the significant difference in each group. The resulting test was significant when p&lt;0.05</p>
            </sec>
        </sec>
        <sec id="sec9" sec-type="results">
            <title>Results</title>
            <p>In this research, we used osteocalcin and BMP-2 levels to assess the outcome of using bone tissue engineering (SVF and scaffold) in experimental animals. Osteocalcin and BMP-2 were measured using ELISA, and the results are depicted in 
                <xref ref-type="table" rid="T1">Table 1</xref>.</p>
            <table-wrap id="T1" orientation="portrait" position="float">
                <label>Table 1. </label>
                <caption>
                    <title>Kruskall-Wallis test results.</title>
                </caption>
                <table content-type="article-table" frame="hsides">
                    <thead>
                        <tr>
                            <th align="left" colspan="1" rowspan="1" valign="top">Treatment groups</th>
                            <th align="left" colspan="1" rowspan="1" valign="top">Mean&#x00b1;SD osteocalcin</th>
                            <th align="left" colspan="1" rowspan="1" valign="top">Mean&#x00b1;SD BMP-2</th>
                            <th align="left" colspan="1" rowspan="1" valign="top">p-value</th>
                        </tr>
                    </thead>
                    <tbody>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="middle">K-negative</td>
                            <td align="left" colspan="1" rowspan="1" valign="middle">29.268&#x00b1;0.783</td>
                            <td align="left" colspan="1" rowspan="1" valign="middle">224.504&#x00b1;65.686</td>
                            <td align="left" colspan="1" rowspan="2" valign="middle">
                                <italic toggle="yes">p</italic>: 0.006
                                <xref ref-type="table-fn" rid="tfn1">
                                    <sup>a</sup>
                                </xref>
                            </td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="middle">K-positive</td>
                            <td align="left" colspan="1" rowspan="1" valign="middle">28.933&#x00b1;2.767</td>
                            <td align="left" colspan="1" rowspan="1" valign="middle">230.592&#x00b1;38.624</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="middle">K-P1 (SVF and porous carbonated-HA)</td>
                            <td align="left" colspan="1" rowspan="1" valign="middle">45.998&#x00b1;12.065</td>
                            <td align="left" colspan="1" rowspan="1" valign="middle">313.337&#x00b1;56.372</td>
                            <td align="left" colspan="1" rowspan="3" valign="middle">
                                <italic toggle="yes">p</italic>: 0.001
                                <xref ref-type="table-fn" rid="tfn2">
                                    <sup>b</sup>
                                </xref>
                            </td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="middle">K-P2 (SVF and nanocrystalline-HA)</td>
                            <td align="left" colspan="1" rowspan="1" valign="middle">47.137&#x00b1;3.027</td>
                            <td align="left" colspan="1" rowspan="1" valign="middle">402.528&#x00b1;122.479</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1" valign="middle">K-P3 (SVF and bovine-HA)</td>
                            <td align="left" colspan="1" rowspan="1" valign="middle">50.92&#x00b1;2.059</td>
                            <td align="left" colspan="1" rowspan="1" valign="middle">491.572&#x00b1;88.597</td>
                        </tr>
                    </tbody>
                </table>
                <table-wrap-foot>
                    <fn-group content-type="footnotes">
                        <fn id="tfn1">
                            <label>
                                <sup>a</sup>
                            </label>
                            <p>Significancy test result using Kruskal-Wallis for osteocalcin.</p>
                        </fn>
                        <fn id="tfn2">
                            <label>
                                <sup>b</sup>
                            </label>
                            <p>Significancy test result using Kruskal-Wallis for BMP-2.</p>
                        </fn>
                    </fn-group>
                </table-wrap-foot>
            </table-wrap>
            <sec id="sec10">
                <title>Osteocalcin level</title>
                <p>In this study, we found that the mean level of osteocalcin using bone tissue engineering (SVF and scaffold) was higher when compared to either the positive or negative control groups. The group with the highest osteocalcin level after 30 days was the KP-3 group, which contained SVF and bovine HA, with a mean osteocalcin level of 50.92&#x00b1;2.059 ng/ml while the lowest was KP-1 which contained SVF and porous carbonated-HA (45.998&#x00b1;12.065) ng/ml. Then, we performed a statistical Kruskal-Wallis test; it was found that the significance test result was less than 0.05. Therefore, it can be concluded that applying SVF and scaffolds has a significant effect on osteocalcin levels (
                    <xref ref-type="fig" rid="f1">Figure 1</xref>).</p>
                <fig fig-type="figure" id="f1" orientation="portrait" position="float">
                    <label>Figure 1. </label>
                    <caption>
                        <title>Histogram of average osteocalcin based on each group.</title>
                    </caption>
                    <graphic id="gr1" orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/122521/71c82396-f970-4f7f-9e33-edd5393a831c_figure1.gif"/>
                </fig>
                <p>Then, for further comprehension of the difference between in each intervention, the experiment processed to the 
                    <italic toggle="yes">post hoc</italic> test next. From the results of the 
                    <italic toggle="yes">post hoc</italic> test, a significant relationship between positive control and SVF and bovine-HA was found (p=0.006), as well as between negative control and treatment with SVF and bovine HA (p=0.003); therefore, it can be concluded that the use of bone tissue engineering using SVF and bovine HA can significantly increase the level of osteocalcin in experimental animals when compared to the negative and positive groups (
                    <xref ref-type="table" rid="T2">Table 2</xref>).</p>
                <table-wrap id="T2" orientation="portrait" position="float">
                    <label>Table 2. </label>
                    <caption>
                        <title>Post hoc testing effect of SVF and scaffolds application on osteocalcin and BMP-2 levels.</title>
                    </caption>
                    <table content-type="article-table" frame="hsides">
                        <thead>
                            <tr>
                                <th align="left" colspan="1" rowspan="1" valign="top">Treatment groups comparison</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">p-value osteocalcin levels</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">p-value BMP-2 levels</th>
                            </tr>
                        </thead>
                        <tbody>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="middle">K-Negative-K-Positive</td>
                                <td align="left" colspan="1" rowspan="1" valign="middle">0.811
                                    <xref ref-type="table-fn" rid="tfn4">
                                        <sup>*</sup>
                                    </xref>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="middle">1
                                    <xref ref-type="table-fn" rid="tfn4">
                                        <sup>*</sup>
                                    </xref>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="middle">K-Negative-K-P2 (SVF &amp; nanocrystalline-HA)</td>
                                <td align="left" colspan="1" rowspan="1" valign="middle">0.031
                                    <xref ref-type="table-fn" rid="tfn4">
                                        <sup>*</sup>
                                    </xref>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="middle">0.534
                                    <xref ref-type="table-fn" rid="tfn4">
                                        <sup>*</sup>
                                    </xref>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="middle">K-Negative-K-P1 (SVF &amp; porous carbonated-HA)</td>
                                <td align="left" colspan="1" rowspan="1" valign="middle">0.017
                                    <xref ref-type="table-fn" rid="tfn4">
                                        <sup>*</sup>
                                    </xref>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="middle">0.044
                                    <xref ref-type="table-fn" rid="tfn3">
                                        <sup>+</sup>
                                    </xref>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="middle">K-Negative-K-P3 (SVF &amp; Bovine-HA)</td>
                                <td align="left" colspan="1" rowspan="1" valign="middle">0.003
                                    <xref ref-type="table-fn" rid="tfn3">
                                        <sup>+</sup>
                                    </xref>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="middle">0.002
                                    <xref ref-type="table-fn" rid="tfn3">
                                        <sup>+</sup>
                                    </xref>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="middle">K-Positive-K-P2 (SVF &amp; nanocrystalline-HA)</td>
                                <td align="left" colspan="1" rowspan="1" valign="middle">0.046
                                    <xref ref-type="table-fn" rid="tfn3">
                                        <sup>+</sup>
                                    </xref>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="middle">0.050
                                    <xref ref-type="table-fn" rid="tfn3">
                                        <sup>+</sup>
                                    </xref>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="middle">K-Positive-K-P1 (SVF &amp; porous carbonated-HA)</td>
                                <td align="left" colspan="1" rowspan="1" valign="middle">0.031
                                    <xref ref-type="table-fn" rid="tfn3">
                                        <sup>+</sup>
                                    </xref>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="middle">0.045
                                    <xref ref-type="table-fn" rid="tfn3">
                                        <sup>+</sup>
                                    </xref>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="middle">K-Positive-K-P3 (SVF &amp; Bovine-HA)</td>
                                <td align="left" colspan="1" rowspan="1" valign="middle">0.006
                                    <xref ref-type="table-fn" rid="tfn3">
                                        <sup>+</sup>
                                    </xref>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="middle">0.003
                                    <xref ref-type="table-fn" rid="tfn3">
                                        <sup>+</sup>
                                    </xref>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="middle">K-P2 (SVF &amp; nanocrystalline-HA)-K-P1 (SVF &amp; porous carbonated-HA)</td>
                                <td align="left" colspan="1" rowspan="1" valign="middle">0.811
                                    <xref ref-type="table-fn" rid="tfn4">
                                        <sup>*</sup>
                                    </xref>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="middle">0.53
                                    <xref ref-type="table-fn" rid="tfn4">
                                        <sup>*</sup>
                                    </xref>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="middle">K-P2 (SVF &amp; nanocrystalline-HA)-K-P3 (SVF &amp; Bovine-HA)</td>
                                <td align="left" colspan="1" rowspan="1" valign="middle">0.403
                                    <xref ref-type="table-fn" rid="tfn4">
                                        <sup>*</sup>
                                    </xref>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="middle">0.044
                                    <xref ref-type="table-fn" rid="tfn3">
                                        <sup>+</sup>
                                    </xref>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="middle">K-P1 (SVF &amp; porous carbonated-HA)-K-P3 (SVF &amp; Bovine-HA)</td>
                                <td align="left" colspan="1" rowspan="1" valign="middle">0.55
                                    <xref ref-type="table-fn" rid="tfn4">
                                        <sup>*</sup>
                                    </xref>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="middle">0.532
                                    <xref ref-type="table-fn" rid="tfn4">
                                        <sup>*</sup>
                                    </xref>
                                </td>
                            </tr>
                        </tbody>
                    </table>
                    <table-wrap-foot>
                        <p>Notes: Significancy value from post hoc-test means a significant difference when p&lt;0.05.</p>
                        <fn-group content-type="footnotes">
                            <fn id="tfn3">
                                <label>
                                    <sup>+</sup>
                                </label>
                                <p>Significant test result.</p>
                            </fn>
                            <fn id="tfn4">
                                <label>
                                    <sup>*</sup>
                                </label>
                                <p>Not significant test result.</p>
                            </fn>
                        </fn-group>
                    </table-wrap-foot>
                </table-wrap>
            </sec>
            <sec id="sec11">
                <title>BMP-2 level</title>
                <p>Furthermore, we evaluated BMP-2 levels in rats with bone defects using bone tissue engineering. It was found that the outcomes of applying bone tissue engineering using SVF and bovine HA (KP-3) led to a significantly higher BMP level (491,572&#x00b1;88,597) pg/ml, more than the results of the other groups. Moreover, the results of the Kruskal-Wallis test proved that there was a significant difference between groups for this marker (p=0.001). In comparison, the lowest concentration of BMP-2 was found in KP-1, which was treated with SVF and porous carbonated HA (313,337&#x00b1;56,372) pg/mL. This finding was similar to the results obtained in the previous osteocalcin level, which was highest for KP-3 and lowest for KP-1 compared to other experimental groups (
                    <xref ref-type="fig" rid="f2">Figure 2</xref>).</p>
                <fig fig-type="figure" id="f2" orientation="portrait" position="float">
                    <label>Figure 2. </label>
                    <caption>
                        <title>Histogram of average BMP-2 based on each groups.</title>
                    </caption>
                    <graphic id="gr2" orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/122521/71c82396-f970-4f7f-9e33-edd5393a831c_figure2.gif"/>
                </fig>
                <p>We also performed a 
                    <italic toggle="yes">post hoc</italic> test to determine the differences between each group. The 
                    <italic toggle="yes">post hoc</italic> test revealed a significant relationship between positive control and SVF and bovine HA (p=0.003) and a relationship between negative control and SVF and bovine HA (p=0.002) (
                    <xref ref-type="table" rid="T2">Table 2</xref>).</p>
            </sec>
        </sec>
        <sec id="sec12" sec-type="discussion">
            <title>Discussion</title>
            <p>One of the most extraordinary characteristics of bone is its remarkable capability to recover with almost minimal scarring.
                <sup>
                    <xref ref-type="bibr" rid="ref7">7</xref>
                </sup> However, when bone defects reach a critical size, disruptions at the fracture site may affect the repair process. This condition results in nonunion healing.
                <sup>
                    <xref ref-type="bibr" rid="ref19">19</xref>
                </sup> Because of so many restrictions associated with bone reconstruction using autografts or bank bones, researchers have explored other methods for bone repair. Recent tissue engineering techniques have regenerated bone by putting MSCs and growth factors contained in SVF from adipose tissue onto porous ceramic scaffolds.</p>
            <p>Adipose tissue has long been viewed as useless tissue, and for many years, fat tissue has been regarded as &#x201c;waste material&#x201d; in surgical treatments.
                <sup>
                    <xref ref-type="bibr" rid="ref28">28</xref>
                </sup> Hollenberg initially described SVF in 1960, and in 2001 SVF was discovered to contain a large number of MSCs.
                <sup>
                    <xref ref-type="bibr" rid="ref28">28</xref>
                </sup>
                <sup>,</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref29">29</xref>
                </sup> SVF have many benefits promoting bone healing. These advantages include, first, that fat tissue is relatively simple to extract which may minimize patient discomfort. Second, tissue extraction processes from adipose tissue to SVF with significant number of MSCs can be completed quickly; third, the multipotent cells contained in SVF can adhere quickly to the scaffold material, multiply rapidly, and differentiate into osteogenic elements.
                <sup>
                    <xref ref-type="bibr" rid="ref30">30</xref>
                </sup>
                <sup>,</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref31">31</xref>
                </sup> Not only does it have the capability to assist the healing process of bone defects, SVF also can prevent bone bridge formation on growth plate injury, which can be useful for growth plate injury cases. This has been evidenced in our previous studies
                <sup>
                    <xref ref-type="bibr" rid="ref32">32</xref>
                </sup>
            </p>
            <p>Scaffolds have been developed over the last few decades; they provide a three-dimensional structure for cell support.
                <sup>
                    <xref ref-type="bibr" rid="ref33">33</xref>
                </sup> Thus, they have the potential to dictate cell-specific features via the release of numerous growth factors, as well as surface binding and physicochemical proportions. Furthermore, Scaffolds or bone grafts are used to enhance or induce bone formation for fixing bone fractures or connecting two bones along a diseased joint, to replace and regenerate lost bone as a result of trauma, infection, or disease, or to improve the bone healing response and regeneration of bone tissue surrounding surgically implanted devices, such as artificial joints replacements or plates and screws used to maintain bone alignment.
                <sup>
                    <xref ref-type="bibr" rid="ref16">16</xref>
                </sup>
                <sup>,</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref34">34</xref>
                </sup>
            </p>
            <p>Several studies have reported that SFV and scaffolds lead to promising outcomes for stimulating bone repair in bone defects.
                <sup>
                    <xref ref-type="bibr" rid="ref13">13</xref>
                </sup>
                <sup>,</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref14">14</xref>
                </sup>
                <sup>,</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref18">18</xref>
                </sup>
                <sup>,</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref19">19</xref>
                </sup> In this study, we compared the outcome of combining SVF with various types of scaffolds 
                <italic toggle="yes">in vivo</italic> to assess their effectiveness. We used combinations of SVF and porous carbonated HA, SVF and nanocrystalline HA, last, and SVF and bovine HA. Interestingly, we found the combination of SVF and bovine-HA showed a significantly higher activity of osteocalcin and BMP-2 than other combinations. Moreover, it has been reported previously that bovine HA has a lower toxicity effect than other types; this was confirmed in a study conducted by Kamal 
                <italic toggle="yes">et al.</italic>, who stated that Scaffold IV (bovine HA granule) had the least toxic effect on rat bone marrow.
                <sup>
                    <xref ref-type="bibr" rid="ref35">35</xref>
                </sup>
            </p>
            <p>In addition, in this study, we used BMP-2 levels to evaluate bone healing, as BMPs levels are widely considered as the most effective group of growth factors for helping in the healing of major bone lesions. However, only BMP-2 has been demonstrated to be required for the osteogenic process, and both BMP-2 and BMP-7 have been approved for clinical usage in the treatment of significant bone abnormalities.
                <sup>
                    <xref ref-type="bibr" rid="ref36">36</xref>
                </sup>
            </p>
            <p>Bone remodeling is a complex process involving a variety of cellular and molecular events. Bone cells collaborate with other cells to promote the healing process.
                <sup>
                    <xref ref-type="bibr" rid="ref37">37</xref>
                </sup> MSCs can be administered in combination with a scaffold to increase bone formation 
                <italic toggle="yes">in vivo</italic>; autologous MSCs have been effectively used in combination with a HA-based scaffolds to repair critical-sized and bone defects 
                <italic toggle="yes">in vivo</italic>.
                <sup>
                    <xref ref-type="bibr" rid="ref38">38</xref>
                </sup> In another study, Roato, 2018 compared SVF and adipose tissue-derived stem cells (ASCs) combined with bovine scaffold. From the results of the study it was found that the administration of SVF and bovine scaffold had better osteoinductive abilities than ASCs.
                <sup>
                    <xref ref-type="bibr" rid="ref39">39</xref>
                </sup> Therefore, the use of SVF in combination with bovine scaffold has a good potential for promoting bone healing in bone defects cases. This theory is relevant to this study, as the combination of SVF and bovine HA scaffold had higher levels of osteocalcin and BMP-2 when compared to the control groups.</p>
            <p>The application of SVF (stem cells) and scaffolds enhances the activity and efficiency of the bone healing process, because SVF containing progenitor cells synergizes with the scaffold, which provides a site for colonization of progenitor cells and growth factors such as transforming growth factor (TGF), insulin-like growth factor 1 (IGF1), and platelet-derived growth factor (PDGF, insulin). In addition to fibroblast growth factor 1 (FGF1), FGF2, and PDGF, scaffolds have a role in filling bone defects. The bone healing process becomes more effective when the procedure described previously is used.</p>
            <p>We suggest further studies to use a different fixation, such as external or internal fixation, to better aim the study towards various modalities used in orthopedics fields. Different biomarkers could also be assessed in future studies, such as alkaline phosphatase (ALP), osteopontin bone marker, type II collagen among others, as well as from a histological standpoint.</p>
        </sec>
        <sec id="sec13" sec-type="conclusions">
            <title>Conclusions</title>
            <p>From this study, it can be concluded that the application of Bone Tissue Engineering (SVF and scaffolds) could enhance the healing process in murine models with bone defect, marked by increasing levels of osteocalcin and BMP-2 as bone formation markers.</p>
        </sec>
        <sec id="sec14">
            <title>Data availability</title>
            <sec id="sec15">
                <title>Underlying data</title>
                <p>Zenodo: Bone Tissue Engineering Application on Fracture Healing with Bone Defect as Assessed Through Osteocalcin and Bone Morphogenetic Protein-2 (BMP-2) Biomarker Examination: Experimental Study on Murine Model, 
                    <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.5281/zenodo.6361033">https://doi.org/10.5281/zenodo.6361033</ext-link>.
                    <sup>
                        <xref ref-type="bibr" rid="ref40">40</xref>
                    </sup>
                </p>
                <p>This project contains the following underlying data:
                    <list list-type="bullet">
                        <list-item>
                            <label>&#x2212;</label>
                            <p>Raw Data BTE.sav (Osteocalcin and BMP-2 Level)</p>
                        </list-item>
                        <list-item>
                            <label>&#x2212;</label>
                            <p>Raw Data BTE.xlsx (Osteocalcin and BMP-2 Level)</p>
                        </list-item>
                    </list>
                </p>
                <p>Data are available under the terms of the Creative 
                    <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution 4.0 International license</ext-link> (CC-BY 4.0).</p>
            </sec>
        </sec>
        <sec id="sec16">
            <title>Reporting guidelines</title>
            <p>Zenodo: Bone Tissue Engginering Application on Fracture Healing with Bone Defect as Assessed Through Osteocalcin and Bone Morphogenetic Protein-2 (BMP-2) Biomarker Examination: Experimental Study on Murine Model, 
                <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.5281/zenodo.6361033">https://doi.org/10.5281/zenodo.6361033</ext-link>.
                <sup>
                    <xref ref-type="bibr" rid="ref40">40</xref>
                </sup>
            </p>
            <p>This project contains the following reporting guidelines:
                <list list-type="bullet">
                    <list-item>
                        <label>-</label>
                        <p>ARRIVE Guidelines Checklist.pdf</p>
                    </list-item>
                </list>
            </p>
            <p>Data are available under the terms of the 
                <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution 4.0 International license</ext-link> (CC-BY 4.0).</p>
        </sec>
    </body>
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    </back>
    <sub-article article-type="reviewer-report" id="report154881">
        <front-stub>
            <article-id pub-id-type="doi">10.5256/f1000research.122521.r154881</article-id>
            <title-group>
                <article-title>Reviewer response for version 1</article-title>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author">
                    <name>
                        <surname>Chin</surname>
                        <given-names>Kok-Yong</given-names>
                    </name>
                    <xref ref-type="aff" rid="r154881a1">1</xref>
                    <role>Referee</role>
                    <uri content-type="orcid">https://orcid.org/0000-0001-6628-1552</uri>
                </contrib>
                <aff id="r154881a1">
                    <label>1</label>Department of Pharmacology, Faculty of Medicine, Universiti Kebangsaan Malaysia Medical Centre, Kuala Lumpur, Malaysia</aff>
            </contrib-group>
            <author-notes>
                <fn fn-type="conflict">
                    <p>
                        <bold>Competing interests: </bold>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>15</day>
                <month>11</month>
                <year>2022</year>
            </pub-date>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2022 Chin KY</copyright-statement>
                <copyright-year>2022</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access peer review report distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <related-article ext-link-type="doi" id="relatedArticleReport154881" related-article-type="peer-reviewed-article" xlink:href="10.12688/f1000research.110867.1"/>
            <custom-meta-group>
                <custom-meta>
                    <meta-name>recommendation</meta-name>
                    <meta-value>reject</meta-value>
                </custom-meta>
            </custom-meta-group>
        </front-stub>
        <body>
            <p>The authors demonstrated that&#x00a0;stromal vascular fraction and&#x00a0;bovine bone scaffold could increase osteocalcin and BMP2 expression at the bone defect. My major contention for the paper is that the scope is too small and the increase in both biomarkers could not justify enhanced bone healing in the treated animals. Most importantly, physical evidence of healing through microCT or histological techniques is not demonstrated. These data should be available since the bone samples were available for the study. The authors should be well aware that bone defect healing is a multistage process, and the aforementioned markers cannot encapsulate the processes.&#x00a0;</p>
            <p> </p>
            <p> I also question the sample size (4 rats/group), which is not justified properly in the methodology. I am not sure which ANOVA test they have chosen but I assumed one-way ANOVA. How did the authors process the post hoc comparison if the KS test were positive?&#x00a0;</p>
            <p> </p>
            <p> The bone protein extraction protocol is not mentioned. I am not sure the results were normalized with total protein concentration. In view of this, I cannot trust the protein level of both markers.</p>
            <p>Is the work clearly and accurately presented and does it cite the current literature?</p>
            <p>Partly</p>
            <p>If applicable, is the statistical analysis and its interpretation appropriate?</p>
            <p>Partly</p>
            <p>Are all the source data underlying the results available to ensure full reproducibility?</p>
            <p>Yes</p>
            <p>Is the study design appropriate and is the work technically sound?</p>
            <p>Partly</p>
            <p>Are the conclusions drawn adequately supported by the results?</p>
            <p>Partly</p>
            <p>Are sufficient details of methods and analysis provided to allow replication by others?</p>
            <p>Yes</p>
            <p>Reviewer Expertise:</p>
            <p>Bone metabolism, osteoporosis, vitamin E</p>
            <p>I confirm that I have read this submission and believe that I have an appropriate level of expertise to state that I do not consider it to be of an acceptable scientific standard, for reasons outlined above.</p>
        </body>
    </sub-article>
    <sub-article article-type="reviewer-report" id="report151519">
        <front-stub>
            <article-id pub-id-type="doi">10.5256/f1000research.122521.r151519</article-id>
            <title-group>
                <article-title>Reviewer response for version 1</article-title>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author">
                    <name>
                        <surname>Gaber</surname>
                        <given-names>Timo</given-names>
                    </name>
                    <xref ref-type="aff" rid="r151519a1">1</xref>
                    <role>Referee</role>
                    <uri content-type="orcid">https://orcid.org/0000-0002-6675-3895</uri>
                </contrib>
                <aff id="r151519a1">
                    <label>1</label>Charit&#x00e9;&#x2014;Universit&#x00e4;tsmedizin Berlin, Berlin, Germany</aff>
            </contrib-group>
            <author-notes>
                <fn fn-type="conflict">
                    <p>
                        <bold>Competing interests: </bold>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>15</day>
                <month>11</month>
                <year>2022</year>
            </pub-date>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2022 Gaber T</copyright-statement>
                <copyright-year>2022</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access peer review report distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <related-article ext-link-type="doi" id="relatedArticleReport151519" related-article-type="peer-reviewed-article" xlink:href="10.12688/f1000research.110867.1"/>
            <custom-meta-group>
                <custom-meta>
                    <meta-name>recommendation</meta-name>
                    <meta-value>reject</meta-value>
                </custom-meta>
            </custom-meta-group>
        </front-stub>
        <body>
            <p>The research article entitled &#x201c;Bone tissue engineering application on fracture healing with bone defect as assessed through osteocalcin and bone morphogenetic protein-2 (BMP-2) biomarker examination: experimental study on murine models&#x201d; by Sananta et al. deals with the analysis of bone fracture healing of critical size defects using Wistar rats (instead of mice!) using bone tissue engineering. Three different approaches have been conducted: (i) porous-carbonated HA, (ii) nanocrystalline HA (iii) bovine HA each combined with a non-defined stromal vascular fraction from adipose tissue compared to (iv) a control group without bone defect (but with surgical intervention? Or not?) and (v) a control group with the bone defect. Readout parameters were osteocalcin (OC) and BMP2 levels. The complete study is poorly described. The diction of the English language is in great need of improvement, as the entire text is difficult, almost incomprehensible. In particular, the wording for mice and rats was mixed-up. &#x00a0;Several major concerns have emerged in the scientific work: 
                <list list-type="bullet">
                    <list-item>
                        <p>The basic hypothesis to conduct the animal experiments is missing. What are the primary and secondary outcome parameters? How was bone healing influenced and how was the impact on bone healing measured?</p>
                    </list-item>
                    <list-item>
                        <p>The power analysis to determine the number of animals needed is missing.</p>
                    </list-item>
                    <list-item>
                        <p>Quality controls and characterization of adipose tissue, stromal vascular fraction and mature adipocytes are missing. How much was added to the fracture gap and what was the frequency of subpopulations?</p>
                    </list-item>
                    <list-item>
                        <p>The study is poorly designed. The sham control is missing. The SVF-only control and the HA-controls are missing.</p>
                    </list-item>
                    <list-item>
                        <p>The number of animals used is quite low. A power analysis would have been useful. Sample withdrawal for ELISA of OC and BMP-2 is not explained. Inclusion criteria are poorly defined (What does &#x201c;fit&#x201d; mean?). Exclusion and termination criteria are 
                            <underline>not</underline> defined.</p>
                    </list-item>
                    <list-item>
                        <p>Statistical analyses are poorly described (e.g., what kind of post-hoc test?).</p>
                    </list-item>
                </list> Minor concerns: 
                <list list-type="bullet">
                    <list-item>
                        <p>The requirements for the Arrive guidelines are not sufficiently met or described</p>
                    </list-item>
                    <list-item>
                        <p>The abbreviation must be explained when used the first time, e.g., SVF in the abstract.</p>
                    </list-item>
                    <list-item>
                        <p>Materials and methods must be clearly described. In particular, surgical procedures and evaluation of fracture healing.</p>
                    </list-item>
                    <list-item>
                        <p>Units for OC and BMP-2 are missing in the figures and figure legends.</p>
                    </list-item>
                </list> An inadequate study design and lack of controls lead to the assessment that even a revision without large experimental effort is currently not possible and therefore only the rejection of the manuscript comes into account.</p>
            <p>Is the work clearly and accurately presented and does it cite the current literature?</p>
            <p>No</p>
            <p>If applicable, is the statistical analysis and its interpretation appropriate?</p>
            <p>No</p>
            <p>Are all the source data underlying the results available to ensure full reproducibility?</p>
            <p>No</p>
            <p>Is the study design appropriate and is the work technically sound?</p>
            <p>No</p>
            <p>Are the conclusions drawn adequately supported by the results?</p>
            <p>No</p>
            <p>Are sufficient details of methods and analysis provided to allow replication by others?</p>
            <p>No</p>
            <p>Reviewer Expertise:</p>
            <p>Bone tissue engineering, tissue regeneration, immunometabolism, immunology</p>
            <p>I confirm that I have read this submission and believe that I have an appropriate level of expertise to state that I do not consider it to be of an acceptable scientific standard, for reasons outlined above.</p>
        </body>
    </sub-article>
</article>
