<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Publishing DTD v1.2 20190208//EN" "http://jats.nlm.nih.gov/publishing/1.2/JATS-journalpublishing1.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" article-type="systematic-review" dtd-version="1.2" xml:lang="en">
    <front>
        <journal-meta>
            <journal-id journal-id-type="pmc">F1000Research</journal-id>
            <journal-title-group>
                <journal-title>F1000Research</journal-title>
            </journal-title-group>
            <issn pub-type="epub">2046-1402</issn>
            <publisher>
                <publisher-name>F1000 Research Limited</publisher-name>
                <publisher-loc>London, UK</publisher-loc>
            </publisher>
        </journal-meta>
        <article-meta>
            <article-id pub-id-type="doi">10.12688/f1000research.75539.2</article-id>
            <article-categories>
                <subj-group subj-group-type="heading">
                    <subject>Systematic Review</subject>
                </subj-group>
                <subj-group>
                    <subject>Articles</subject>
                </subj-group>
            </article-categories>
            <title-group>
                <article-title>Effects of physical activity and dietary supplement on fat free mass and bone mass density during weight loss &#x2013; a systematic review and meta-analysis.</article-title>
                <fn-group content-type="pub-status">
                    <fn>
                        <p>[version 2; peer review: 2 approved]</p>
                    </fn>
                </fn-group>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Roth</surname>
                        <given-names>Anja</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <role content-type="http://credit.niso.org/">Formal Analysis</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <uri content-type="orcid">https://orcid.org/0000-0001-8354-3585</uri>
                    <xref ref-type="aff" rid="a1">1</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Sattelmayer</surname>
                        <given-names>Martin</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <role content-type="http://credit.niso.org/">Investigation</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Validation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <uri content-type="orcid">https://orcid.org/0000-0001-8001-4776</uri>
                    <xref ref-type="aff" rid="a2">2</xref>
                </contrib>
                <contrib contrib-type="author" corresp="yes">
                    <name>
                        <surname>Schorderet</surname>
                        <given-names>Chlo&#x00e9;</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <uri content-type="orcid">https://orcid.org/0000-0001-7033-678X</uri>
                    <xref ref-type="corresp" rid="c1">a</xref>
                    <xref ref-type="aff" rid="a3">3</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Gafner</surname>
                        <given-names>Simone</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Supervision</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <xref ref-type="aff" rid="a4">4</xref>
                    <xref ref-type="aff" rid="a5">5</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Allet</surname>
                        <given-names>Lara</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <role content-type="http://credit.niso.org/">Formal Analysis</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Supervision</role>
                    <role content-type="http://credit.niso.org/">Validation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <uri content-type="orcid">https://orcid.org/0000-0003-3260-7176</uri>
                    <xref ref-type="aff" rid="a3">3</xref>
                    <xref ref-type="aff" rid="a6">6</xref>
                </contrib>
                <aff id="a1">
                    <label>1</label>Bern University of Applied Sciences, Bern, Switzerland</aff>
                <aff id="a2">
                    <label>2</label>School of Health Sciences, University of Applied Sciences and Arts Western Switzerland, Valais, HES-SO Valais Wallis, Leukerbad, Switzerland</aff>
                <aff id="a3">
                    <label>3</label>School of Health Sciences, University of Applied Sciences and Arts Western Switzerland, Valais, HES-SO Valais Wallis, Sion, Switzerland</aff>
                <aff id="a4">
                    <label>4</label>Geneva School of Health Sciences, Gen&#x00e8;ve, Switzerland</aff>
                <aff id="a5">
                    <label>5</label>Geneva School of Health Sciences, HES&#x2011;SO, University of Applied Sciences and Arts Western Switzerland, 47 Avenue de Champel, 1206 Geneva, Switzerland</aff>
                <aff id="a6">
                    <label>6</label>Geneva University Hospitals and Faculty of Medicine, Gen&#x00e8;ve, Switzerland</aff>
            </contrib-group>
            <author-notes>
                <corresp id="c1">
                    <label>a</label>
                    <email xlink:href="mailto:chloe.schorderet@hevs.ch">chloe.schorderet@hevs.ch</email>
                </corresp>
                <fn fn-type="conflict">
                    <p>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>12</day>
                <month>8</month>
                <year>2022</year>
            </pub-date>
            <pub-date pub-type="collection">
                <year>2022</year>
            </pub-date>
            <volume>11</volume>
            <elocation-id>8</elocation-id>
            <history>
                <date date-type="accepted">
                    <day>4</day>
                    <month>8</month>
                    <year>2022</year>
                </date>
            </history>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2022 Roth A et al.</copyright-statement>
                <copyright-year>2022</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <self-uri content-type="pdf" xlink:href="https://f1000research.com/articles/11-8/pdf"/>
            <abstract>
                <p>
                    <bold>Background</bold>: After a diet- or surgery induced weight loss almost 1/3 of lost weight consists of fat free mass (FFM) if carried out without additional therapy. Exercise training and a sufficient supply of protein, calcium and vitamin D is recommended to reduce the loss of FFM.</p>
                <p>
                    <bold>Objective</bold>: To investigate the effect of exercise training, protein, calcium, and vitamin D supplementation on the preservation of FFM during non-surgical and surgical weight loss and of the combination of all interventions together in adults with obesity.</p>
                <p>
                    <bold>Methods</bold>: A systematic review was performed with a pairwise meta-analysis and an exploratory network meta-analysis according to the PRISMA statement.</p>
                <p>
                    <bold>Results</bold>: Thirty studies were included in the quantitative analysis. The pairwise meta-analysis showed for Exercise Training + High Protein vs. High Protein a moderate and statistically significant effect size (SMD 0.45; 95% CI 0.04 to 0.86), for Exercise Training + High Protein vs. Exercise Training a high but statistically not significant effect size (SMD 0.91; 95% CI -0.59 to 2.41) and for Exercise Training alone vs. Control a moderate but statistically not significant effect size (SMD 0.67; 95% CI -0.25 to 1.60). In the exploratory network meta-analysis three interventions showed statistically significant effect sizes compared to Control and all of them included the treatment Exercise Training.</p>
                <p>
                    <bold>Conclusions</bold>: Results underline the importance of exercise training and a sufficient protein intake to preserve FFM during weight loss in adults with obesity. The effect of calcium and vitamin D supplementation remains controversial and further research are needed.</p>
            </abstract>
            <kwd-group kwd-group-type="author">
                <kwd>weight loss</kwd>
                <kwd>obesity</kwd>
                <kwd>fat free mass</kwd>
                <kwd>body composition</kwd>
                <kwd>exercise training</kwd>
            </kwd-group>
            <funding-group>
                <funding-statement>The author(s) declared that no grants were involved in supporting this work.</funding-statement>
            </funding-group>
        </article-meta>
        <notes>
            <sec sec-type="version-changes">
                <label>Revised</label>
                <title>Amendments from Version 1</title>
                <p>The authors have made various clarifications, particularly in the description of the eligibility criteria. Figure 1 was modified. In addition, they used the GRADE to assess the quality of the included articles. They also completed the discussion. Finally, the language of the whole article has been improved to make it clearer, including the title.</p>
            </sec>
        </notes>
    </front>
    <body>
        <sec id="sec35">
            <title>List of abbreviations</title>
            <p>BIA: Bioelectrical impedance analysis</p>
            <p>BMD: Bone mineral density</p>
            <p>BMI: Body mass index</p>
            <p>CI: Confidence interval</p>
            <p>DXA: Dual energy X-ray absorptiometry</p>
            <p>FFM: Fat-free mass</p>
            <p>SD: Standard deviation</p>
            <p>SMD: Standardized mean difference</p>
        </sec>
        <sec id="sec1" sec-type="intro">
            <title>Introduction</title>
            <p>The global prevalence of obesity and excess bodyweight has risen substantially in the past three decades. Worldwide, between 1980 and 2013, the proportion of overweight or obese adults increased from 28.8% to 36.9% in men and from 29.8% to 38.0% in women.
                <xref ref-type="bibr" rid="ref1">
                    <sup>1</sup>
                </xref> The rising prevalence of overweight and obese individuals has been described as a global pandemic.
                <xref ref-type="bibr" rid="ref2">
                    <sup>2</sup>
                </xref> Treatment options for obesity include conservative interventions (diet and/or exercise) and surgical interventions. A 5% to 10% reduction in baseline weight is frequently recommended as a conservative treatment.
                <xref ref-type="bibr" rid="ref3">
                    <sup>3</sup>
                </xref> The literature reports that weight loss within this range not only has a beneficial impact on several obesity-related health conditions and co-morbidities, but can also be cost-effective.
                <xref ref-type="bibr" rid="ref4">
                    <sup>4</sup>
                </xref>
                <sup>&#x2013;</sup>
                <xref ref-type="bibr" rid="ref6">
                    <sup>6</sup>
                </xref> A non-surgical, multi-component approach is generally the initial treatment, including aspects like improved nutrition, exercise training, cognitive behavioral therapy, and a variety of pharmacotherapies.
                <xref ref-type="bibr" rid="ref7">
                    <sup>7</sup>
                </xref> Bariatric surgery may be considered when conservative approaches fail; it is recommended for individuals with a body mass index (BMI) &gt; 35 kg/m
                <sup>2</sup> with serious co-morbidities related to obesity.
                <xref ref-type="bibr" rid="ref8">
                    <sup>8</sup>
                </xref> A surgical procedure complements but does not replace behavioral, medical, and lifestyle treatments.
                <xref ref-type="bibr" rid="ref7">
                    <sup>7</sup>
                </xref> Management and treatment of obesity should have broader objectives than just the desired weight loss and should include risk reduction and health improvements.
                <xref ref-type="bibr" rid="ref7">
                    <sup>7</sup>
                </xref>
            </p>
            <p>One repeatedly stated challenge during weight loss is the undesired decrease in fat-free mass (FFM), such as muscle mass and bone mineral density (BMD).
                <xref ref-type="bibr" rid="ref9">
                    <sup>9</sup>
                </xref> This undesirable weight loss can have serious consequences for patients. Recent studies, for example, have revealed that patients who undergo bariatric surgery typically develop a pattern of osteoporosis characterized by bone loss, and they are therefore at greater risk of fractures than obese subjects or non-obese controls.
                <xref ref-type="bibr" rid="ref10">
                    <sup>10</sup>
                </xref> FFM is an important factor in basal metabolic rate, the regulation of body temperature, preservation of skeletal integrity, functional capacity, and quality of life.
                <xref ref-type="bibr" rid="ref11">
                    <sup>11</sup>
                </xref> Because of this, preserving FFM or minimizing its loss while losing fat mass is considered optimal and has been referred to as &#x201c;high-quality weight loss&#x201d;.
                <xref ref-type="bibr" rid="ref12">
                    <sup>12</sup>
                </xref>
            </p>
            <p>The literature reveals that after an excessive diet-induced weight loss program (&#x2265;20% of body weight), 27.8% of the weight lost consists of FFM if that program was carried out without additional therapy.
                <xref ref-type="bibr" rid="ref11">
                    <sup>11</sup>
                </xref> The same problem occurs with surgically-induced weight loss. After gastric bypass surgery with no other interventions, FFM accounts for 31.3% of the weight lost.
                <xref ref-type="bibr" rid="ref11">
                    <sup>11</sup>
                </xref>
            </p>
            <p>More recent literature shows the importance of resistance training and/or high-impact training and an intake of calcium and vitamin D to maintain or reduce FFM loss and, more specifically, the loss of BMD.
                <xref ref-type="bibr" rid="ref13">
                    <sup>13</sup>
                </xref> Both endurance- and resistance-type exercises seem to help preserve muscle mass during weight loss.
                <xref ref-type="bibr" rid="ref9">
                    <sup>9</sup>
                </xref> Additionally, resistance-type exercise improves muscle strength.
                <xref ref-type="bibr" rid="ref9">
                    <sup>9</sup>
                </xref> Inadequate protein intake results in a loss of FFM; thus, sufficient protein intake is highly recommended.
                <xref ref-type="bibr" rid="ref9">
                    <sup>9</sup>
                </xref>
            </p>
            <p>A recent survey in England revealed that some healthcare professionals caring for bariatric surgery patients did not follow recommendations on multivitamin, calcium, and vitamin D supplementation.
                <xref ref-type="bibr" rid="ref14">
                    <sup>14</sup>
                </xref> Furthermore, there is evidence that 67% of bariatric surgery patients are not physically active enough to maintain their weight loss (compared to 38% in the non-surgical group).
                <xref ref-type="bibr" rid="ref15">
                    <sup>15</sup>
                </xref> Considering these findings, it seems evident that the roles of exercise training and dietary supplements such as protein, calcium, and vitamin D during weight loss need further investigation, and their beneficial effects should be summarized to underline their importance.</p>
            <p>Even though there is a well-established body of literature on exercise and dietary supplementation with protein, calcium, or vitamin D during weight loss, to the best of our knowledge, there have been no systematic reviews and meta-analyses to evaluate these interventions&#x2019; effects on preserving FFM. This systematic review and meta-analysis aimed to summarize current evidence on the maintenance of FFM through exercise training and/or dietary supplementation with protein, calcium, and vitamin D during weight loss interventions for adults. We aimed to calculate each individual intervention&#x2019;s effects on the preservation of FFM during weight loss, namely exercise, protein supplementation, calcium supplementation, and vitamin D supplementation. We also investigated whether the combination of all four interventions (overall effect of exercise training and protein, calcium, and vitamin D supplementation) had a more beneficial impact on the maintenance of FFM than did each intervention individually. This led to the following research question:</p>
            <p>What effect does exercise training have, with or without dietary supplementation (protein or calcium or vitamin D), on the preservation of FFM (BMD and muscle mass) among obese adults who have experienced weight loss (whether operative or conservative)?</p>
            <p>We hypothesized that a) exercise training, with or without dietary supplementation, had a beneficial effect on maintaining FFM during weight loss, and b) that the combination of exercise therapy and dietary supplementation had a greater effect on maintaining FFM than did each intervention alone. We performed a systematic review involving a pairwise meta-analysis and an exploratory network meta-analysis to test our hypothesis.</p>
        </sec>
        <sec id="sec2" sec-type="methods">
            <title>Methods</title>
            <sec id="sec3">
                <title>Design</title>
                <p>A systematic literature review involving a meta-analysis and a network meta-analysis was conducted in accordance with the PRISMA Extension Statement for Reporting of Systematic Reviews Incorporating Network Meta-analyses of Health Care Interventions.
                    <xref ref-type="bibr" rid="ref16">
                        <sup>16</sup>
                    </xref> The study protocol was registered on PROSPERO (registration number: CRD42019134651).</p>
            </sec>
            <sec id="sec4">
                <title>Eligibility criteria</title>
                <p>We included studies assessing overweight or obese (BMI of 25&#x2013;29.9 kg/m
                    <sup>2</sup> or BMI &#x2265; 30 kg/m
                    <sup>2</sup>)17 adults (&#x2265; 18 years of age) undergoing diet- or surgery-induced weight loss and without a secondary diagnosis limiting their exercise activity (e.g., fractures, cancer, neurological diseases). Considered were randomized controlled trials or clinical trials comparing exercise training (defined as &#x201c;at least 150&#x2013;300 minutes of moderate-intensity aerobic physical activity; or at least 75&#x2013;150 minutes of vigorous intensity aerobic physical activity; or an equivalent combination of moderate- and vigorous-intensity activity throughout the week&#x201d; (p. 2), or as &#x201c;muscle strengthening activities at moderate or greater intensity that involve all major muscle groups on 2 or more days a week&#x201d; (p. 2) according to the WHO
                    <xref ref-type="bibr" rid="ref17">
                        <sup>17</sup>
                    </xref>) alone or in combination with dietary supplementation (protein, calcium and/or vitamin D) with a placebo intervention, controlled comparison intervention or standard care. Studies assessing subjects&#x2019; FFM and/or BMD and/or muscle mass pre- and post-intervention were also included. Only studies in English, German, and French were included. Studies that used alternative treatment methods for weight loss (such as drugs) were excluded.</p>
            </sec>
            <sec id="sec5">
                <title>Information sources</title>
                <p>A systematic literature search was performed in the following electronic databases:
                    <list list-type="bullet">
                        <list-item>
                            <label>&#x2022;</label>
                            <p>
                                <ext-link ext-link-type="uri" xlink:href="https://ospguides.ovid.com/OSPguides/medline.htm">Ovid Medline</ext-link> (date of inception [1946] to August 27, 2020) (RRID: SCR_002185)</p>
                        </list-item>
                        <list-item>
                            <label>&#x2022;</label>
                            <p>
                                <ext-link ext-link-type="uri" xlink:href="https://www.wolterskluwer.com/en/solutions/ovid/embase-903">Ovid Embase</ext-link> (date of inception [1974] to August 27, 2020) (RRID: SCR_001650)</p>
                        </list-item>
                        <list-item>
                            <label>&#x2022;</label>
                            <p>
                                <ext-link ext-link-type="uri" xlink:href="https://www.cochranelibrary.com/central">Cochrane Central Register of Controlled Trials</ext-link> (CENTRAL) (date of inception [1996] to August 27, 2020) (RRID: SCR_001650)</p>
                        </list-item>
                        <list-item>
                            <label>&#x2022;</label>
                            <p>ISI 
                                <ext-link ext-link-type="uri" xlink:href="https://www.webofscience.com/wos/woscc/basic-search">Web of Science</ext-link> (date of inception [1900] to August 27, 2020)</p>
                        </list-item>
                    </list>
                </p>
            </sec>
            <sec id="sec6">
                <title>Search strategy</title>
                <p>A search strategy was built using the following keywords: (&#x201c;weight loss&#x201d; OR &#x201c;overweight&#x201d; OR &#x201c;obesity&#x201d; OR &#x201c;adiposity&#x201d; OR &#x201c;body weight changes&#x201d;) AND (&#x201c;physical training&#x201d; OR &#x201c;physical activity&#x201d; OR &#x201c;exercise&#x201d; OR &#x201c;exercise therapy&#x201d;) AND (&#x201c;dietary supplements&#x201d; OR &#x201c;nutritional&#x201d; OR &#x201c;supplementation&#x201d; OR &#x201c;protein&#x201d; OR &#x201c;amino acids&#x201d; OR &#x201c;calcium&#x201d; OR &#x201c;vitamin D&#x201d;) AND (&#x201c;body composition&#x201d; OR &#x201c;fat free mass&#x201d; OR &#x201c;lean mass&#x201d; OR &#x201c;bone density&#x201d; OR &#x201c;muscle mass&#x201d;). Keywords and medical subject headings were identified with the assistance of a librarian from Bern University of Applied Sciences. Cochrane&#x2019;s highly sensitive filter was used to identify randomized controlled trials. The search strategy was adapted for each database. Our detailed search strategy for the Ovid MEDLINE database can be found in Appendix A.
                    <xref ref-type="bibr" rid="ref70">
                        <sup>70</sup>
                    </xref> Additionally, the bibliographies of the relevant review articles and studies found via this search were examined for further potential studies. All the database searches were conducted on October 10, 2019, and again on August 27, 2020.</p>
            </sec>
            <sec id="sec7">
                <title>Selection process</title>
                <p>Two investigators (AR and CS) independently screened all the titles and abstracts of the publications revealed in the electronic databases. In cases of disagreement about an article&#x2019;s inclusion, they discussed it until a consensus was found. The studies selected for inclusion were imported into EndNote X9.3.2.3 reference management software (Clarivate Analytics, Philadelphia, US) (RRID: SCR_014001), and duplicates were removed. An eligibility assessment was performed based on the title and abstract. To be included, the studies had to meet all the inclusion criteria. In cases of uncertainty regarding the article&#x2019;s content based on its title and abstract, the full text was accessed and evaluated. The online 
                    <ext-link ext-link-type="uri" xlink:href="https://www.covidence.org/">Covidence</ext-link> platform was used to simplify the screening process. Full-text versions of all the studies meeting our inclusion criteria were retrieved for methodological quality assessment and data extraction.</p>
            </sec>
            <sec id="sec8">
                <title>Data extraction</title>
                <p>The information from each study included in the review was extracted and entered into an Excel file by the investigator. Data were extracted on study characteristics (e.g., author, year, country, study design, inclusion and exclusion criteria, funding, intervention groups, follow-up time, limitations), participants&#x2019; traits (e.g., sample size in each group, mean age, sex, mean weight, BMI and FFM, muscle mass, and BMD at baseline), and study results (outcome data, measurement methods, drop-outs). Missing data from four studies
                    <xref ref-type="bibr" rid="ref18">
                        <sup>18</sup>
                    </xref>
                    <sup>&#x2013;</sup>
                    <xref ref-type="bibr" rid="ref21">
                        <sup>21</sup>
                    </xref> were obtained by contacting their authors. If available, change score means and standard deviations (SD) were extracted. Otherwise, final values were used. SDs were derived from the 95% confidence intervals (95%CI) for two studies.
                    <xref ref-type="bibr" rid="ref22">
                        <sup>22</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref23">
                        <sup>23</sup>
                    </xref> The SDs for seven studies
                    <xref ref-type="bibr" rid="ref19">
                        <sup>19</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref21">
                        <sup>21</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref24">
                        <sup>24</sup>
                    </xref>
                    <sup>&#x2013;</sup>
                    <xref ref-type="bibr" rid="ref28">
                        <sup>28</sup>
                    </xref> were imputed using the 
                    <italic toggle="yes">p</italic>-value. To obtain equal scales, outcome data reported in percentages were proportionally converted into kilograms.
                    <xref ref-type="bibr" rid="ref29">
                        <sup>29</sup>
                    </xref>
                    <sup>&#x2013;</sup>
                    <xref ref-type="bibr" rid="ref33">
                        <sup>33</sup>
                    </xref>
                </p>
            </sec>
            <sec id="sec9">
                <title>Statistical analysis</title>
                <p>If only one study was available for a treatment comparison (i.e., statistical pooling was impossible), findings were reported as standardized mean differences (SMD) with their corresponding 95%CI. The minimum number of studies needed to perform a meta-analysis was set to 2 studies, if they were sufficiently similar, as recommended by Valentine 
                    <italic toggle="yes">et al.</italic>
                    <xref ref-type="bibr" rid="ref34">
                        <sup>34</sup>
                    </xref> and Higgins 
                    <italic toggle="yes">et al.</italic>
                    <xref ref-type="bibr" rid="ref35">
                        <sup>35</sup>
                    </xref> The analyses were performed using change scores, if possible, otherwise final values were used.
                    <xref ref-type="bibr" rid="ref36">
                        <sup>36</sup>
                    </xref> Where enough studies were available per treatment comparison and outcome, and the assumption of transitivity was fulfilled, a network meta-analysis was performed using a frequentist model. The assumption of transitivity was assessed for every study included in the network meta-analysis.
                    <xref ref-type="bibr" rid="ref37">
                        <sup>37</sup>
                    </xref> Studies had to be similar regarding their clinical and methodological aspects, with the exception of compared interventions.</p>
                <p>A random effect model was chosen for all the meta-analyses because of the clinical and methodological diversity among the studies included. Pairwise meta-analyses were performed using the Meta statistical analysis package in R software (R Core Team, Austria) (RRID: SCR_00195).
                    <xref ref-type="bibr" rid="ref38">
                        <sup>38</sup>
                    </xref> The Netmeta package
                    <xref ref-type="bibr" rid="ref39">
                        <sup>39</sup>
                    </xref> was used for the network meta-analysis. SMDs were calculated and expressed as Hedges&#x2019; g. The DerSimonian&#x2013;Laird estimator was used to analyze between-study variance (&#x03c4;
                    <sup>2</sup>).
                    <xref ref-type="bibr" rid="ref40">
                        <sup>40</sup>
                    </xref> The Hartung&#x2013;Knapp&#x2013;Sidik&#x2013;Jonkman adjustment for random effects models was also applied.
                    <xref ref-type="bibr" rid="ref41">
                        <sup>41</sup>
                    </xref> A meta-regression for the variables of age at baseline and BMI at baseline was calculated using a mixed-effects model.
                    <xref ref-type="bibr" rid="ref42">
                        <sup>42</sup>
                    </xref>
                </p>
                <p>All the outcomes of interest were reported as continuous data. The interpretation of effect sizes was made according to the Cochrane Handbook.
                    <xref ref-type="bibr" rid="ref43">
                        <sup>43</sup>
                    </xref> A small effect size was considered as 0.2 to 0.49, a moderate effect size as 0.5 to 0.79, and a large effect size as &#x2265; 0.8.</p>
                <p>The SMD was selected as the effect size for the meta-analyses because the SMD enables a quick interpretation of the size of the effect. Interpreting a reduction in FFM or a change in BMD is not straightforward, and we believe that results are more clinically interpretable using SMDs. In addition, Takeshima 
                    <italic toggle="yes">et al</italic>.
                    <xref ref-type="bibr" rid="ref44">
                        <sup>44</sup>
                    </xref> demonstrated that the SMD is more generalizable than the MD.</p>
                <p>Statistical heterogeneity between studies was assessed using a Chi
                    <sup>2</sup> test and I
                    <sup>2</sup> statistics. Those calculations were also interpreted according to the Cochrane handbook.
                    <xref ref-type="bibr" rid="ref43">
                        <sup>43</sup>
                    </xref> Results with a 
                    <italic toggle="yes">p</italic>-value &lt; 0.05 were considered statistically significant. If studies assessed different groups, only data on the groups meeting our eligibility criteria were analyzed.</p>
            </sec>
            <sec id="sec10">
                <title>Risk of bias assessment</title>
                <p>To assess the quality of the studies selected, we used the revised Cochrane risk-of-bias tool for randomized trials (RoB 2.0), the updated version of the most-used tool for assessing the risk of bias in randomized trials.
                    <xref ref-type="bibr" rid="ref45">
                        <sup>45</sup>
                    </xref> Each criterion was evaluated according to the tool&#x2019;s key questions and finally classified as &#x201c;low risk&#x201d;, &#x201c;some concerns&#x201d;, or &#x201c;high risk&#x201d;. The risk of bias assessment was performed after the data was extracted by the two reviewers independently (AR and CS). Disagreements between reviewers were resolved by discussion until a consensus was found. Potential publication bias could not be assessed using funnel plots or statistical tests, such as Egger&#x2019;s test, because these methods do not possess enough power to distinguish chance from real asymmetry when fewer than 10 studies are involved in a pairwise meta-analysis.
                    <xref ref-type="bibr" rid="ref43">
                        <sup>43</sup>
                    </xref>
                </p>
                <p>Recommendations from the GRADE working group were used to rate the quality of the available evidence.
                    <xref ref-type="bibr" rid="ref46">
                        <sup>46</sup>
                    </xref>
                </p>
            </sec>
        </sec>
        <sec id="sec11" sec-type="results">
            <title>Results</title>
            <p>We found 31 eligible studies, but a quantitative synthesis was only possible for 30 of them. One study only reported muscle mass and not FFM as its outcome and, therefore, could not be included in comparisons with the others.
                <xref ref-type="bibr" rid="ref47">
                    <sup>47</sup>
                </xref> The study selection process is summarized in 
                <xref ref-type="fig" rid="f1">Figure 1</xref>. A list of all the included studies and a table of their individual characteristics are presented in Appendices B and C. All the studies were randomized controlled studies and were published between 1999 and 2019 with sample sizes ranging from 5 to 169 subjects. Participants&#x2019; ages ranged from 21 to 74 years, and BMIs ranged from 25.8 to 56.8 kg/m
                <sup>2</sup>. Follow-up periods ranged from 4 weeks to 24 months. Most of the trials were from the USA (k = 11)
                <xref ref-type="bibr" rid="ref19">
                    <sup>19</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref20">
                    <sup>20</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref22">
                    <sup>22</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref24">
                    <sup>24</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref30">
                    <sup>30</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref32">
                    <sup>32</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref33">
                    <sup>33</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref48">
                    <sup>48</sup>
                </xref>
                <sup>&#x2013;</sup>
                <xref ref-type="bibr" rid="ref51">
                    <sup>51</sup>
                </xref> followed by Canada (k = 5)
                <xref ref-type="bibr" rid="ref25">
                    <sup>25</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref52">
                    <sup>52</sup>
                </xref>
                <sup>&#x2013;</sup>
                <xref ref-type="bibr" rid="ref55">
                    <sup>55</sup>
                </xref> and Brazil (k = 3).
                <xref ref-type="bibr" rid="ref18">
                    <sup>18</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref21">
                    <sup>21</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref26">
                    <sup>26</sup>
                </xref> Six studies used resistance training for their exercise training intervention
                <xref ref-type="bibr" rid="ref25">
                    <sup>25</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref32">
                    <sup>32</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref47">
                    <sup>47</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref55">
                    <sup>55</sup>
                </xref>
                <sup>&#x2013;</sup>
                <xref ref-type="bibr" rid="ref57">
                    <sup>57</sup>
                </xref> eight used aerobic training
                <xref ref-type="bibr" rid="ref12">
                    <sup>12</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref23">
                    <sup>23</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref33">
                    <sup>33</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref48">
                    <sup>48</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref51">
                    <sup>51</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref58">
                    <sup>58</sup>
                </xref>
                <sup>&#x2013;</sup>
                <xref ref-type="bibr" rid="ref60">
                    <sup>60</sup>
                </xref> and 17 used combined training programs.
                <xref ref-type="bibr" rid="ref18">
                    <sup>18</sup>
                </xref>
                <sup>&#x2013;</sup>
                <xref ref-type="bibr" rid="ref22">
                    <sup>22</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref24">
                    <sup>24</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref26">
                    <sup>26</sup>
                </xref>
                <sup>&#x2013;</sup>
                <xref ref-type="bibr" rid="ref31">
                    <sup>31</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref49">
                    <sup>49</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref50">
                    <sup>50</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref52">
                    <sup>52</sup>
                </xref>
                <sup>&#x2013;</sup>
                <xref ref-type="bibr" rid="ref54">
                    <sup>54</sup>
                </xref> All exercises interventions are described in Appendix C. Among the group of exercise training alone, different training modalities were used. Some had strength and other endurance training and among those who had the strength training different training parameters were chosen (i.e. different training volumes and intensities).</p>
            <fig fig-type="figure" id="f1" orientation="portrait" position="float">
                <label>Figure 1. </label>
                <caption>
                    <p>PRISMA flow chart describing the article selection process.</p>
                </caption>
                <graphic id="gr1" orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/135721/a2fabcd1-49f2-4180-8261-ad331a39a29d_figure1.gif"/>
            </fig>
            <sec id="sec12">
                <title>Risk of bias assessment</title>
                <p>
                    <xref ref-type="fig" rid="f2">Figure 2</xref> presents the detailed results of the risk of bias assessment. The randomization process was clearly described in 73.3% of the studies. Deviations from the intended interventions were either not clearly described or inappropriately analyzed in 53.3% of the studies. Missing outcome data were reported properly in 56.7% of the studies. The measurement of the outcome data was reliable and valid in 96.7% of the studies, but 20% of them were at risk of a potential selective reporting bias. Fifty percent of the studies included in the network meta-analysis were conducted without mentioning sponsors or funding resources.</p>
                <fig fig-type="figure" id="f2" orientation="portrait" position="float">
                    <label>Figure 2. </label>
                    <caption>
                        <title>Risk of bias according to the revised Cochrane risk-of-bias tool for randomized trials (RoB 2.0). NB. &#x201c;!&#x201d; in the &#x201c;overall&#x201d; category corresponds to &#x201c;Some concerns&#x201d;.</title>
                    </caption>
                    <graphic id="gr2" orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/135721/a2fabcd1-49f2-4180-8261-ad331a39a29d_figure2.gif"/>
                </fig>
            </sec>
            <sec id="sec13">
                <title>FFM</title>
                <p>
                    <bold>
                        <italic toggle="yes">Effects of diet-induced weight loss on FFM</italic>
                    </bold>
                </p>
                <p>We made 23 pairwise comparisons involving a total of 1642 patients to assess effects on the FFM outcomes. All the participants underwent a diet-induced weight loss program. The commonest comparison was Exercise Training versus a Control (k = 7),
                    <xref ref-type="bibr" rid="ref20">
                        <sup>20</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref25">
                        <sup>25</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref31">
                        <sup>31</sup>
                    </xref>
                    <sup>&#x2013;</sup>
                    <xref ref-type="bibr" rid="ref33">
                        <sup>33</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref48">
                        <sup>48</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref57">
                        <sup>57</sup>
                    </xref> followed by Exercise Training + High Protein versus Exercise Training (k = 6),
                    <xref ref-type="bibr" rid="ref12">
                        <sup>12</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref22">
                        <sup>22</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref52">
                        <sup>52</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref54">
                        <sup>54</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref56">
                        <sup>56</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref59">
                        <sup>59</sup>
                    </xref> and Exercise Training + High Protein versus High Protein (k = 5).
                    <xref ref-type="bibr" rid="ref24">
                        <sup>24</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref30">
                        <sup>30</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref55">
                        <sup>55</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref58">
                        <sup>58</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref60">
                        <sup>60</sup>
                    </xref> &#x201c;High Protein&#x201d; meant that the participants exceeded the regular recommendation of 0.8g/kg body weight per day or hit 20% or more of caloric intake from protein.
                    <xref ref-type="bibr" rid="ref61">
                        <sup>61</sup>
                    </xref>
                </p>
                <p>
                    <xref ref-type="fig" rid="f3">Figure 3</xref> presents a forest plot of the pairwise meta-analyses. The comparison of Exercise Training + High Protein versus High Protein
                    <xref ref-type="bibr" rid="ref24">
                        <sup>24</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref30">
                        <sup>30</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref55">
                        <sup>55</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref58">
                        <sup>58</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref60">
                        <sup>60</sup>
                    </xref> was the only statistically significant analysis including more than one study. It showed a small-to-moderately weighted effect size favoring Exercise Training + High Protein (SMD 0.45; 95%CI 0.04 to 0.86). It was also the only meta-analysis demonstrating no heterogeneity (I
                    <sup>2</sup> = 0%). The comparison of Exercise Training versus a Control
                    <xref ref-type="bibr" rid="ref20">
                        <sup>20</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref25">
                        <sup>25</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref31">
                        <sup>31</sup>
                    </xref>
                    <sup>&#x2013;</sup>
                    <xref ref-type="bibr" rid="ref33">
                        <sup>33</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref48">
                        <sup>48</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref57">
                        <sup>57</sup>
                    </xref> showed a moderate but not statistically significant weighted effect size favoring the intervention group (SMD 0.76; 95%CI -0.37 to 1.89). The comparison of Exercise Training + High Protein versus Exercise Training
                    <xref ref-type="bibr" rid="ref12">
                        <sup>12</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref22">
                        <sup>22</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref52">
                        <sup>52</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref54">
                        <sup>54</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref56">
                        <sup>56</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref59">
                        <sup>59</sup>
                    </xref> resulted in a large, but again, not statistically significant weighted effect size favoring the intervention group (SMD 0.91; 95%CI -0.59 to 2.41). The between-study heterogeneity for these two comparisons was large and statistically significant (I
                    <sup>2</sup> = 84% and I
                    <sup>2</sup> = 94%, respectively). The subgroup of Exercise Training + Calcium versus Exercise Training
                    <xref ref-type="bibr" rid="ref19">
                        <sup>19</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref51">
                        <sup>51</sup>
                    </xref> showed a small effect size, with a wide 95%CI, favoring Exercise Training + Calcium (SMD 0.15; 95%CI -4.62 to 4.93). The heterogeneity for this comparison was large (I
                    <sup>2</sup> = 70%). For the comparison of Exercise Training + Calcium + Vitamin D versus Exercise Training
                    <xref ref-type="bibr" rid="ref28">
                        <sup>28</sup>
                    </xref> a small but not statistically significant weighted effect size was detected favoring Exercise Training + Calcium + Vitamin D (SMD 0.30, 95%CI -0.32 to 0.93). Heterogeneity was not applicable. In the comparison of Exercise Training + Calcium + Vitamin D versus Calcium + Vitamin D
                    <xref ref-type="bibr" rid="ref62">
                        <sup>62</sup>
                    </xref> a large and statistically significant weighted effect size favoring Exercise Training + Calcium + Vitamin D was detected (SMD 0.81, 95%CI 0.25 to 1.36). Heterogeneity was not applicable.</p>
                <fig fig-type="figure" id="f3" orientation="portrait" position="float">
                    <label>Figure 3. </label>
                    <caption>
                        <title>Forest plot of the head-to-head comparisons for the fat-free mass (kg) outcome during diet-induced weight loss.</title>
                        <p>Data are presented as SMDs with 95%CIs. The FFM outcomes are expressed as change scores and final values.</p>
                    </caption>
                    <graphic id="gr3" orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/135721/a2fabcd1-49f2-4180-8261-ad331a39a29d_figure3.gif"/>
                </fig>
                <p>The comparison of Exercise Training + Vitamin D versus Exercise Training
                    <xref ref-type="bibr" rid="ref49">
                        <sup>49</sup>
                    </xref> showed a large, statistically significant effect size (SMD 1.17; 95%CI 0.88 to 1.46) favoring Exercise Training + Vitamin D. Again, heterogeneity was not applicable.</p>
                <p>In addition to the pairwise meta-analysis, a network meta-analysis assessed FFM outcomes after diet-induced weight loss. The Exercise Training + Vitamin D treatment resulted in the greatest weighted effect size (SMD 1.99; 95%CI 0.15 to 3.82) and therefore was ranked as the most effective treatment according to this network meta-analysis, followed by Exercise Training + High Protein (SMD 1.70; 95%CI 0.68 to 2.73) and High Protein alone (SMD 1.13; 95%CI -0.19 to 2.44). Three interventions showed statistically significant weighted effect sizes, and all of them included the Exercise Training treatment: Exercise Training + Vitamin D, Exercise Training + High Protein, and Exercise Training alone. The Calcium + Vitamin D treatment resulted in a relatively-small weighted effect size with a wide 95%CI (SMD 0.31, 95%CI -2.30 to 2.91) compared to other interventions. 
                    <xref ref-type="fig" rid="f4">Figure 4</xref> presents each treatment&#x2019;s effect sizes compared to the control group as well as their ranking. The geometry of the network comprised n = 8 nodes and n = 7 edges. The network did not comprise any closed loops (i.e., parts of the network where all comparisons are connected to each other
                    <xref ref-type="bibr" rid="ref63">
                        <sup>63</sup>
                    </xref>). It was, therefore, impossible to explore the inconsistency within the network by comparing direct and indirect treatment estimates, as suggested by Veroniki 
                    <italic toggle="yes">et al.</italic>
                    <xref ref-type="bibr" rid="ref64">
                        <sup>64</sup>
                    </xref> The network graph with the number of trials is presented in 
                    <xref ref-type="fig" rid="f5">Figure 5</xref>. The pooled effect estimations of all the direct and network meta-analysis comparisons and their 
                    <italic toggle="yes">p</italic>-values are also presented in Appendices D and E.</p>
                <fig fig-type="figure" id="f4" orientation="portrait" position="float">
                    <label>Figure 4. </label>
                    <caption>
                        <p>Network meta-analysis ranking and summary of weighted effect sizes.</p>
                    </caption>
                    <graphic id="gr4" orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/135721/a2fabcd1-49f2-4180-8261-ad331a39a29d_figure4.gif"/>
                </fig>
                <fig fig-type="figure" id="f5" orientation="portrait" position="float">
                    <label>Figure 5. </label>
                    <caption>
                        <title>Network geometry and number of studies in each comparison.</title>
                        <p>Every intervention was compared to a Control. Weighted effect sizes are presented as SMDs and their corresponding 95%CI.</p>
                    </caption>
                    <graphic id="gr5" orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/135721/a2fabcd1-49f2-4180-8261-ad331a39a29d_figure5.gif"/>
                </fig>
                <p>A meta-regression was only applicable for comparing Exercise Training versus Controls for the variables of age and BMI at baseline. In the overall model, the age at baseline variable only explained 15.21% of the variability in the effect sizes and was not statistically significant (R
                    <sup>2</sup>: 39.41%, 
                    <italic toggle="yes">p</italic>-value: 0.33). There was only a weak relationship between the explanatory variable and the effect estimate (b1: -0.04; 95%CI -0.15 to 0.07, t: -1.11, 
                    <italic toggle="yes">p</italic>-value: 0.33). The variable of BMI at baseline explained 0.00% of the variability of the effect sizes in the overall model and was not statistically significant (R
                    <sup>2</sup>: 0.00%, 
                    <italic toggle="yes">p</italic>-value: 0.59). This explanatory variable could not be used as a predictor of the effect estimate (b1: 0.1; 95%CI 
                    <bold>-</bold>0.37 to 0.57, t: 0.57, 
                    <italic toggle="yes">p</italic>-value: 0.59).</p>
                <p>
                    <bold>
                        <italic toggle="yes">Effect of surgery-induced weight loss on FFM</italic>
                    </bold>
                </p>
                <p>Six studies
                    <xref ref-type="bibr" rid="ref18">
                        <sup>18</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref21">
                        <sup>21</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref23">
                        <sup>23</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref26">
                        <sup>26</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref27">
                        <sup>27</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref29">
                        <sup>29</sup>
                    </xref> including a total of 443 participants, reported change scores for FFM during surgery-induced weight loss. 
                    <xref ref-type="fig" rid="f6">Figure 6</xref> presents a summary forest plot of these results.</p>
                <fig fig-type="figure" id="f6" orientation="portrait" position="float">
                    <label>Figure 6. </label>
                    <caption>
                        <p>Forest plot of the meta-analysis of outcome change scores for fat-free mass (kg) during surgery-induced weight loss.</p>
                    </caption>
                    <graphic id="gr6" orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/135721/a2fabcd1-49f2-4180-8261-ad331a39a29d_figure6.gif"/>
                </fig>
                <p>
                    <bold>Exercise training versus a control</bold>
                </p>
                <p>Three studies reported FFM as the outcome variable in this subgroup.
                    <xref ref-type="bibr" rid="ref18">
                        <sup>18</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref21">
                        <sup>21</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref26">
                        <sup>26</sup>
                    </xref> The analysis for this outcome showed a small to moderate weighted effect size in favor of Exercise Training over a Control (SMD 0.39; 95%CI -1.01 to 0.78), but the analysis was not statistically significant. There was no evidence of heterogeneity between these studies (I
                    <sup>2</sup> = 0%).</p>
                <p>
                    <bold>Exercise training + high protein versus high protein</bold>
                </p>
                <p>Two studies in this subgroup reported on FFM.
                    <xref ref-type="bibr" rid="ref23">
                        <sup>23</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref27">
                        <sup>27</sup>
                    </xref> The analysis for this outcome showed a small weighted effect size favoring Exercise Training + High Protein over High Protein (SMD 0.25; 95%CI -1.15 to 1.65), but the result was not statistically significant. There was no evidence of heterogeneity between these studies (I
                    <sup>2</sup> = 0%).</p>
                <p>
                    <bold>Exercise training + high protein + calcium + vitamin D versus a control</bold>
                </p>
                <p>Only one study in this subgroup reported on FFM.
                    <xref ref-type="bibr" rid="ref29">
                        <sup>29</sup>
                    </xref> We detected a very large, statistically significant weighted effect size favoring Exercise Training + High Protein + Calcium + Vitamin D over the control group (SMD 5.16; 95%CI 4.60 to 5.71).</p>
            </sec>
            <sec id="sec14">
                <title>BMD</title>
                <p>
                    <bold>
                        <italic toggle="yes">Effect of diet-induced weight loss on BMD</italic>
                    </bold>
                </p>
                <p>Only one study investigated BMD during diet-induced weight loss.
                    <xref ref-type="bibr" rid="ref53">
                        <sup>53</sup>
                    </xref> The intervention group lost less total-body BMD than the control group. The comparison of Exercise Training + High Protein versus Exercise Training
                    <xref ref-type="bibr" rid="ref53">
                        <sup>53</sup>
                    </xref> showed a large weighted effect size (SMD 4.17; 95%CI 3.24 to 5.09) favoring Exercise Training + High Protein.</p>
                <p>
                    <bold>
                        <italic toggle="yes">Effect of surgery-induced weight loss on FFM</italic>
                    </bold>
                </p>
                <p>Two studies investigated BMD after surgery-induced weight loss.
                    <xref ref-type="bibr" rid="ref18">
                        <sup>18</sup>
                    </xref>
                    <sup>,</sup>
                    <xref ref-type="bibr" rid="ref29">
                        <sup>29</sup>
                    </xref> The intervention group lost less total-body BMD than the control group. The comparison of Exercise Training versus a Control
                    <xref ref-type="bibr" rid="ref18">
                        <sup>18</sup>
                    </xref> resulted in a moderate weighted effect size (SMD 0.51; 95%CI 0.01 to 1.01) favoring Exercise Training. Furthermore, the comparison of Exercise Training + High Protein + Calcium + Vitamin D versus a Control
                    <xref ref-type="bibr" rid="ref29">
                        <sup>29</sup>
                    </xref> also resulted in a large weighted effect size (SMD 3.88; 95%CI 3.43 to 4.34). A forest plot of the results for BMD is presented in 
                    <xref ref-type="fig" rid="f7">Figure 7</xref>.</p>
                <fig fig-type="figure" id="f7" orientation="portrait" position="float">
                    <label>Figure 7. </label>
                    <caption>
                        <p>Weighted effects and their corresponding 95%CIs for the outcome change scores for total-body bone mineral density during diet- and surgery-induced weight loss.</p>
                    </caption>
                    <graphic id="gr7" orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/135721/a2fabcd1-49f2-4180-8261-ad331a39a29d_figure7.gif"/>
                </fig>
            </sec>
            <sec id="sec15">
                <title>Muscle mass</title>
                <p>One four-armed study, including 25 participants, assessed muscle mass loss during diet-induced weight loss by comparing Exercise Training + High Protein versus a Control versus Exercise Training versus High Protein.
                    <xref ref-type="bibr" rid="ref47">
                        <sup>47</sup>
                    </xref> No statistically significant differences in muscle mass loss were reported between any of the groups. Nevertheless, the Exercise Training + High Protein group demonstrated the lowest muscle mass loss.</p>
            </sec>
            <sec id="sec16">
                <title>Grade level of evidence</title>
                <p>The level of evidence for each analysis is presented in Appendix F. The quality of evidence for diet-induced weight loss&#x2019;s effects on FFM ranged from very low to moderate. The subgroup-analyses demonstrating a moderate level of evidence were: i) Exercise Training + High Protein versus Exercise Training and ii) Exercise Training + Calcium + Vitamin D versus Calcium + Vitamin D. The quality of evidence for surgery-induced weight loss&#x2019;s effects on FFM also ranged from very low and moderate (Exercise Training + High Protein + Calcium + Vitamin D versus Vitamin D).</p>
            </sec>
        </sec>
        <sec id="sec17">
            <title>Discussion</title>
            <p>This study aimed to determine the effects of exercise training and protein, calcium, and vitamin D supplementation on the preservation of FFM during induced weight loss among overweight and obese adults. It also investigated whether the combination of all these interventions (the overall effect of exercise training and protein, calcium, and vitamin D supplementation) had a more beneficial impact on the maintenance of FFM than each intervention alone. This was done via a systematic review of the literature that found 31 randomized controlled trials covering these topics. Data on the 2560 participants in those trials was investigated using pairwise and network meta-analyses, and the trials are presented in Appendix B.
                <xref ref-type="bibr" rid="ref71">
                    <sup>71</sup>
                </xref> In accordance with our hypothesis, results underlined the importance of exercise training and sufficient protein intake when seeking to preserve FFM during weight loss in obese adults. The effects of calcium and vitamin D supplementation remain controversial, and further research is needed.</p>
            <p>Regarding diet-induced weight loss&#x2019;s effects on FFM, this study&#x2019;s results indicated that Exercise Training plus dietary supplementation was superior to Exercise Training alone, to dietary supplementation alone, and to no interventional therapy during weight loss. The results of our pairwise meta-analysis showed that the Exercise Training + High Protein intervention was superior in every comparison and independent of the outcome and type of induced weight loss. Previous research reported similar findings.
                <xref ref-type="bibr" rid="ref9">
                    <sup>9</sup>
                </xref>
            </p>
            <p>Nevertheless, there was heterogeneity in the results of studies comparing Exercise Training + High Protein versus Exercise Training during diet-induced weight loss. This heterogeneity could be partially due to quality differences in the studies. The two studies which favored the Exercise Training + High Protein group in the preservation of FFM
                <xref ref-type="bibr" rid="ref54">
                    <sup>54</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref59">
                    <sup>59</sup>
                </xref> were rated as &#x201c;low risk&#x201d; for bias, whereas the three studies claiming the contrary were &#x201c;high risk&#x201d; for bias or, at the very least, showed &#x201c;some concerns&#x201d;.
                <xref ref-type="bibr" rid="ref12">
                    <sup>12</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref22">
                    <sup>22</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref56">
                    <sup>56</sup>
                </xref>
            </p>
            <p>Results consistently favored exercise training over the control intervention during diet-induced weight loss, although this was not always statistically significant. These findings were in line with previous reviews.
                <xref ref-type="bibr" rid="ref9">
                    <sup>9</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref11">
                    <sup>11</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref15">
                    <sup>15</sup>
                </xref> One included study
                <xref ref-type="bibr" rid="ref20">
                    <sup>20</sup>
                </xref> stood out for favoring the Control over Exercise Training; it reported the change score for FFM in kg. However, when considering FFM loss in relation to the overall amount of weight lost, the Exercise Training group lost more than the control group.
                <xref ref-type="bibr" rid="ref20">
                    <sup>20</sup>
                </xref> However, only reporting the FFM change score in kg may lead to a misinterpretation of a study&#x2019;s results. Future studies should therefore report both endpoints, namely the change score for FFM in kg as well as the FFM loss in relation to the overall amount of weight loss.</p>
            <p>Regarding the results of our network meta-analysis, the Exercise Training + vitamin D intervention had the largest weighted effect size on FFM during diet-induced weight loss, followed by the Exercise Training + High Protein intervention
                <italic toggle="yes">.</italic> It should be mentioned that the weighted effect size calculation for Exercise Training + Vitamin D was based on a single study. Researchers and clinicians should therefore be careful interpreting these results.</p>
            <p>Regarding the effects of surgery-induced weight loss on FFM, the studies showed a tendency to favor exercise training over controls in our pairwise meta-analysis, but these effects were not statistically significant. Further studies are needed to investigate the effects of post-bariatric surgery exercise training on bone and muscle mass and outcomes assessing the exercise function of the participants.</p>
            <p>The combination of exercise training and high protein, calcium, and vitamin D supplementation seems to be the most effective treatment for maintaining FFM during surgery-induced weight loss. However, only one relevant study investigating this combination of interventions could be found, which limits its informative value.</p>
            <p>After our analyses, a new controlled trial was published investigating the effects of exercise and protein, calcium, and vitamin D supplementation during weight loss.
                <xref ref-type="bibr" rid="ref65">
                    <sup>65</sup>
                </xref> The authors concluded that calcium and vitamin D appeared to provide no additional benefits to dietary and exercise interventions in terms of body composition during weight loss. However, the same researchers discussed the possible beneficial effects of calcium and vitamin D supplementation for persons who were deficient in these micronutrients before supplementation. This might thus limit the number of people who could benefit from calcium and vitamin D supplementation. Yet it might also explain why our review found such a large effect during surgery-induced weight loss since bariatric surgery can result in poor absorption and limited nutritional intake.
                <xref ref-type="bibr" rid="ref9">
                    <sup>9</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref11">
                    <sup>11</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref13">
                    <sup>13</sup>
                </xref> Surgery-induced weight loss is more likely to cause nutrient deficiencies that are important for FFM (including calcium, vitamin D, and protein
                <xref ref-type="bibr" rid="ref10">
                    <sup>10</sup>
                </xref>) than is dietary-induced weight loss. In a meta-analysis by Krieger 
                <italic toggle="yes">et al</italic>. ,
                <xref ref-type="bibr" rid="ref66">
                    <sup>66</sup>
                </xref> a higher daily protein intake of &gt; 1.05 to &#x2264; 1.20 g/kg of body weight was associated with greater FFM maintenance than a lower protein intake of &lt; 0.7 g/kg of body weight during weight loss. Thus, the frequently recommended daily protein intake of 0.8 g/kg of body weight may be inadequate for individuals during weight loss.
                <xref ref-type="bibr" rid="ref66">
                    <sup>66</sup>
                </xref> The meta-analysis by Stockton 
                <italic toggle="yes">et al.</italic>
                <xref ref-type="bibr" rid="ref67">
                    <sup>67</sup>
                </xref> reported that vitamin D supplementation improved muscle function in adults with a vitamin D deficiency but not in non-deficient individuals. Another meta-analysis found a small overall beneficial effect of vitamin D supplementation on BMD at the femoral neck, with larger positive effects in individuals with 25-hydroxyvitamin D levels &#x2264; 20 nmol/L.
                <xref ref-type="bibr" rid="ref68">
                    <sup>68</sup>
                </xref> Goode 
                <italic toggle="yes">et al.</italic>
                <xref ref-type="bibr" rid="ref69">
                    <sup>69</sup>
                </xref> observed dramatically lower intestinal calcium uptake and elevated bone resorption markers among patients who had undergone a gastric bypass, even with the recommended calcium (1.2 g/d) and vitamin D (8 &#x03bc;g/day) intake. Those authors concluded that individuals who underwent bariatric surgery with a malabsorptive component may require even higher dosages to avoid bone loss. However, more research is needed to investigate this question: if individuals undergoing surgery-induced weight loss benefit from calcium and vitamin D supplementation, then why is this not true for non-deficient individuals undergoing diet-induced weight loss?</p>
            <p>The methodologies chosen for estimating FFM might also influence FFM values. One review reported that dual-energy X-ray absorptiometry (DXA) was the most popular method used but that it also has certain biases that may lead to FFM overestimations.
                <xref ref-type="bibr" rid="ref70">
                    <sup>70</sup>
                </xref> As almost all of the included studies (23 out of 29) used DXA to measure FFM, we might have an overestimation, but it is unlikely that the method used explains the major differences. Only one study used skinfold measurements to estimate FFM.
                <xref ref-type="bibr" rid="ref26">
                    <sup>26</sup>
                </xref> This method relies on the tester&#x2019;s technique and skill and does not measure FFM 
                <italic toggle="yes">per se</italic>; rather, it provides data for calculations to predict FFM based upon body density and fat percentage.
                <xref ref-type="bibr" rid="ref70">
                    <sup>70</sup>
                </xref> Three studies assessed FFM using bioelectrical impedance analysis (BIA).
                <xref ref-type="bibr" rid="ref19">
                    <sup>19</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref27">
                    <sup>27</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref28">
                    <sup>28</sup>
                </xref> As this method has inherently large predictive errors, it is insensitive to small improvements in response to treatment.
                <xref ref-type="bibr" rid="ref70">
                    <sup>70</sup>
                </xref> Therefore, studies assessing FFM using BIA might have missed small changes in FFM. There is no one-size-fits-all approach for the assessment of FFM in obese subjects, but future research should be aware of each modality&#x2019;s benefits and drawbacks and choose those most appropriate to their situation.
                <xref ref-type="bibr" rid="ref70">
                    <sup>70</sup>
                </xref>
            </p>
            <p>Our work&#x2019;s major strengths are the large number of studies included (k = 31) and the large sample size (n = 2560). The quality assessment performed by two reviewers independently is a further strength. Combining a wide variety of treatments and merging diet- and surgery-induced weight loss strategies led to a broad overview and added new knowledge to this field of research. However, the study also had some limitations. The first concerned our search strategy. Indeed, few synonyms were used for the secondary outcomes; thus, some potentially eligible studies may have been missed. Another limitation was that 12 of the 31 studies included only evaluated women. It could thus be difficult to generalize the review&#x2019;s findings to a mixed or exclusively male population. In addition, the studies included heterogeneous samples (e.g., age range, BMI, and follow-up length) and a diversity of exercise training interventions and the supplemental dosages. This might also explain the significant heterogeneity in our meta-analyses, as might the sometimes very low number of participants in individual studies.</p>
            <p>Another issue was that the quality of evidence&#x2014;measured using the &#x201c;grade&#x201d; approach&#x2014;ranged from very low to moderate quality. None of the studies was rated as having high-quality evidence. The true effects of the interventions examined might, therefore, differ substantially from the estimated effects presented.</p>
            <p>Additionally, our network meta-analysis did not comprise closed loops (i.e., a set of treatments which have been compared against each other). Therefore, it was impossible to analyze our network&#x2019;s internal consistency by comparing direct and indirect treatment estimates.
                <xref ref-type="bibr" rid="ref64">
                    <sup>64</sup>
                </xref> It should be noted that our network meta-analysis was exploratory in character and, therefore, should be interpreted with caution. A further statistical limitation was that we did not plan a meta-regression from the beginning; thus, we did not report it in the study protocol. It should be interpreted with skepticism as it included fewer than 10 studies.
                <xref ref-type="bibr" rid="ref43">
                    <sup>43</sup>
                </xref> However, it is of clinical importance that the variables of age and BMI at baseline seemed to have no influence on the treatment effects. A more conclusive result will require further investigation. The reasoning behind pooling data when only two studies are available could also be questioned, although this remains in line with current recommendations.
                <xref ref-type="bibr" rid="ref34">
                    <sup>34</sup>
                </xref>
                <sup>,</sup>
                <xref ref-type="bibr" rid="ref35">
                    <sup>35</sup>
                </xref> The fact that a network meta-analysis was carried out could also be criticized considering the small number of articles included. However, this method ensures that only comparable data are analyzed together.</p>
            <p>Some studies only provided incomplete outcome data, which obliged us to calculate results as described in the Methods section. With respect to further empirical trials, separate research studies are needed to better identify how combining exercise training with protein, calcium, and vitamin D supplementation for obese or overweight patients during diet- or surgery-induced weight loss affects BMD and muscle mass independently. Additionally, the long-term effects and cost-effectiveness of exercise interventions and dietary supplementation for obese patients undergoing weight loss should be examined.</p>
            <p>We should also mention that all the types of exercise reported in our review were classified as &#x201c;exercise therapy&#x201d;, with no distinctions made between strength training and endurance training, even though these do not have the same effects on the preservation of FFM.
                <xref ref-type="bibr" rid="ref71">
                    <sup>71</sup>
                </xref> Some of the chosen training modalities do not target an increase in muscle mass or a decrease in fat mass which might underestimate the effectiveness on the outcome FFM.</p>
        </sec>
        <sec id="sec18">
            <title>Conclusion</title>
            <p>The present systematic review, including a meta-analysis and exploratory network meta-analysis, investigated the effects of exercise training and protein, calcium, and vitamin D supplementation, alone and in every possible combination, on the preservation of fat-free mass (FFM) as overweight or obese adults undergo diet- or surgery-induced weight loss. Results showed consistently more positive outcomes for exercise training over control interventions as well as Exercise Training + High Protein over Exercise Training alone. These findings underlined the importance of exercise training and sufficient protein intake when seeking to preserve FFM during weight loss in overweight or obese adults, regardless of the weight loss approach used. The effects of calcium and vitamin D supplementation remain controversial. It has been hypothesized that only individuals deficient in these nutrients will benefit from such an intervention, and future research should investigate this. The gaps in knowledge regarding combining all these treatment interventions to maintain FFM during the weight loss undergone by overweight or obese adults have not yet been fully closed.</p>
        </sec>
        <sec id="sec19">
            <title>Data availability</title>
            <sec id="sec20">
                <title>Underlying data</title>
                <p>Figshare: DATA SET - EFFECTS OF EXERCICE TRAINING AND DIETARY SUPPLEMENTATION ON FAT FREE MASS AND BONE MASS DENSITY DURING WEIGHT LOSS 
                    <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.6084/m9.figshare.17086520">https://doi.org/10.6084/m9.figshare.17086520</ext-link>.</p>
                <p>The project contains the following underlying data:
                    <list list-type="bullet">
                        <list-item>
                            <label>&#x2022;</label>
                            <p>[data_SR_Roth.xlsx] (Raw deidentified data).</p>
                        </list-item>
                    </list>
                </p>
            </sec>
            <sec id="sec21">
                <title>Extended data</title>
                <p>Figshare: Appendix A Search Strategy Medline Ovid 
                    <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.6084/m9.figshare.17113475">https://doi.org/10.6084/m9.figshare.17113475</ext-link>
                </p>
                <p>This project contains the following extended data:
                    <list list-type="bullet">
                        <list-item>
                            <label>&#x2022;</label>
                            <p>AppendixA_Search_Strategy_Ovid.pdf</p>
                        </list-item>
                    </list>
                </p>
                <p>Fighare: Appendix B: List of all included studies 
                    <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.6084/m9.figshare.17113511">https://doi.org/10.6084/m9.figshare.17113511</ext-link>
                </p>
                <p>This project contains the following extended data:
                    <list list-type="bullet">
                        <list-item>
                            <label>&#x2022;</label>
                            <p>AppendixB_List_Included_Studies.pdf</p>
                        </list-item>
                    </list>
                </p>
                <p>Figshare: Appendix C: Characteristics of studies 
                    <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.6084/m9.figshare.17113520.v2This">https://doi.org/10.6084/m9.figshare.17113520.v2</ext-link>.</p>
                <p>This project contains the following extended data:
                    <list list-type="bullet">
                        <list-item>
                            <label>&#x2022;</label>
                            <p>AppendixC_Characteristics_of_Studies.pdf</p>
                        </list-item>
                    </list>
                </p>
                <p>Figshare: Appendix D: Netleague table 
                    <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.6084/m9.figshare.17113520">https://doi.org/10.6084/m9.figshare.17113520</ext-link>
                </p>
                <p>This project contains the following extended data:
                    <list list-type="bullet">
                        <list-item>
                            <label>&#x2022;</label>
                            <p>AppendixD_netleagueTable.csv</p>
                        </list-item>
                    </list>
                </p>
                <p>Figshare: Appendix E p-scores:</p>
                <p>
                    <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.6084/m9.figshare.17113586">https://doi.org/10.6084/m9.figshare.17113586</ext-link>
                </p>
                <p>This project contains the following extended data:
                    <list list-type="bullet">
                        <list-item>
                            <label>&#x2022;</label>
                            <p>AppendixE_PScore.xlsx</p>
                        </list-item>
                    </list>
                </p>
                <p>Figshare: Appendix F Grade</p>
                <p>
                    <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.6084/m9.figshare.20424585.v1">https://doi.org/10.6084/m9.figshare.20424585.v1</ext-link>
                </p>
            </sec>
        </sec>
        <sec id="sec22">
            <title>Reporting guidelines</title>
            <p>The Prisma checklist for this systematic review is available at: 
                <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.6084/m9.figshare.17085932">https://doi.org/10.6084/m9.figshare.17085932</ext-link>
            </p>
            <p>Data are available under the terms of the 
                <ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/publicdomain/zero/1.0/">Creative Commons Zero &#x201c;No rights reserved&#x201d; data waiver</ext-link> (CC0 1.0 Public domain dedication).</p>
        </sec>
    </body>
    <back>
        <ack>
            <title>Acknowledgements</title>
            <p>All the persons named below have given their consent to be mentioned in the manuscript.</p>
            <p>Ms. Lydia Burke, (University of Basel, Master of Science in Exercise and Health Sciences in progress), participated in writing and technical editing of the manuscript as a native speaker.</p>
            <p>Mr. Roger Hilfiker, HES-SO Valais-Wallis, University of Applied Sciences, assisted in statistical matters during the initial stage.</p>
            <p>Ms. Daniela Denzler, librarian at Bern University of Applied Sciences (BFH) assisted in developing and approving the electronic search strategy.</p>
            <p>The abstract of this research was previously presented as part of the 
                <ext-link ext-link-type="uri" xlink:href="https://www.bfh.ch/dam/jcr:76d911b9-a8c9-407b-a693-22d2925519fc/2020_MSc_PHY_Abstractband_v4_web.pdf">Master of Science in Physiotherapy degree course at Berner Fachhochschule</ext-link> (2020).</p>
        </ack>
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        <front-stub>
            <article-id pub-id-type="doi">10.5256/f1000research.135721.r147413</article-id>
            <title-group>
                <article-title>Reviewer response for version 2</article-title>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author">
                    <name>
                        <surname>Ramezani-Jolfaie</surname>
                        <given-names>Nahid</given-names>
                    </name>
                    <xref ref-type="aff" rid="r147413a1">1</xref>
                    <role>Referee</role>
                </contrib>
                <aff id="r147413a1">
                    <label>1</label>Department of Community Medicine, School of Medicine, Hormozgan University of Medical Sciences, Bandar Abbas, Iran</aff>
            </contrib-group>
            <author-notes>
                <fn fn-type="conflict">
                    <p>
                        <bold>Competing interests: </bold>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>22</day>
                <month>8</month>
                <year>2022</year>
            </pub-date>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2022 Ramezani-Jolfaie N</copyright-statement>
                <copyright-year>2022</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access peer review report distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <related-article ext-link-type="doi" id="relatedArticleReport147413" related-article-type="peer-reviewed-article" xlink:href="10.12688/f1000research.75539.2"/>
            <custom-meta-group>
                <custom-meta>
                    <meta-name>recommendation</meta-name>
                    <meta-value>approve</meta-value>
                </custom-meta>
            </custom-meta-group>
        </front-stub>
        <body>
            <p>The revised manuscript has been improved and my concerns have been resolved.&#x00a0;I have no more comments.</p>
            <p>Are the rationale for, and objectives of, the Systematic Review clearly stated?</p>
            <p>Yes</p>
            <p>Is the statistical analysis and its interpretation appropriate?</p>
            <p>Yes</p>
            <p>Are sufficient details of the methods and analysis provided to allow replication by others?</p>
            <p>Partly</p>
            <p>Are the conclusions drawn adequately supported by the results presented in the review?</p>
            <p>Yes</p>
            <p>Reviewer Expertise:</p>
            <p>Nutritionist &amp; Diet therapist</p>
            <p>I confirm that I have read this submission and believe that I have an appropriate level of expertise to confirm that it is of an acceptable scientific standard.</p>
        </body>
    </sub-article>
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        <front-stub>
            <article-id pub-id-type="doi">10.5256/f1000research.135721.r147412</article-id>
            <title-group>
                <article-title>Reviewer response for version 2</article-title>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author">
                    <name>
                        <surname>Saxer</surname>
                        <given-names>St&#x00e9;phanie</given-names>
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                    <xref ref-type="aff" rid="r147412a2">2</xref>
                    <role>Referee</role>
                    <uri content-type="orcid">https://orcid.org/0000-0002-3278-6277</uri>
                </contrib>
                <aff id="r147412a1">
                    <label>1</label>Ostschweizer Fachhochschule, Departement Gesundheit, St. Gallen, Switzerland</aff>
                <aff id="r147412a2">
                    <label>2</label>Department of Pulmonology, University Hospital Zurich, University of Zurich, Zurich, Switzerland</aff>
            </contrib-group>
            <author-notes>
                <fn fn-type="conflict">
                    <p>
                        <bold>Competing interests: </bold>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>15</day>
                <month>8</month>
                <year>2022</year>
            </pub-date>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2022 Saxer S</copyright-statement>
                <copyright-year>2022</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access peer review report distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <related-article ext-link-type="doi" id="relatedArticleReport147412" related-article-type="peer-reviewed-article" xlink:href="10.12688/f1000research.75539.2"/>
            <custom-meta-group>
                <custom-meta>
                    <meta-name>recommendation</meta-name>
                    <meta-value>approve</meta-value>
                </custom-meta>
            </custom-meta-group>
        </front-stub>
        <body>
            <p>The authors responded in detail to all the comments. Only two more points need to be considered: 
                <list list-type="bullet">
                    <list-item>
                        <p>You stated that the title has been changed from &#x2018;physical activity&#x2019; to &#x2018;exercise training&#x2019;, however, this cannot be seen.</p>
                    </list-item>
                    <list-item>
                        <p>Furthermore, the definition you included for &#x2018;exercise training&#x2019; includes the recommendations for physical activity in daily life. You should rewrite this sentence to &#x2018;exercise training or being physically active&#x2019; followed by the definition and probably also make a link to Appendix C where the interventions are described.</p>
                    </list-item>
                </list>
            </p>
            <p>Are the rationale for, and objectives of, the Systematic Review clearly stated?</p>
            <p>Yes</p>
            <p>Is the statistical analysis and its interpretation appropriate?</p>
            <p>Yes</p>
            <p>Are sufficient details of the methods and analysis provided to allow replication by others?</p>
            <p>Yes</p>
            <p>Are the conclusions drawn adequately supported by the results presented in the review?</p>
            <p>Yes</p>
            <p>Reviewer Expertise:</p>
            <p>Exercise, physical activity</p>
            <p>I confirm that I have read this submission and believe that I have an appropriate level of expertise to confirm that it is of an acceptable scientific standard.</p>
        </body>
        <sub-article article-type="response" id="comment8673-147412">
            <front-stub>
                <contrib-group>
                    <contrib contrib-type="author">
                        <name>
                            <surname>Schorderet</surname>
                            <given-names>Chlo&#x00e9; </given-names>
                        </name>
                        <aff>HES-SO Valais Wallis, Switzerland</aff>
                    </contrib>
                </contrib-group>
                <author-notes>
                    <fn fn-type="conflict">
                        <p>
                            <bold>Competing interests: </bold>No competing interests were disclosed.</p>
                    </fn>
                </author-notes>
                <pub-date pub-type="epub">
                    <day>25</day>
                    <month>8</month>
                    <year>2022</year>
                </pub-date>
            </front-stub>
            <body>
                <p>Thank you for your comments.&#x00a0;</p>
                <p> </p>
                <p> We have now changed the title. The term "physical activity" has been replaced with "exercise training".</p>
                <p> </p>
                <p> We have also added the term "physically active" before the definition of "exercise training" and clarified that the types of exercise are described in Appendix C for each study.</p>
            </body>
        </sub-article>
    </sub-article>
    <sub-article article-type="reviewer-report" id="report127522">
        <front-stub>
            <article-id pub-id-type="doi">10.5256/f1000research.79422.r127522</article-id>
            <title-group>
                <article-title>Reviewer response for version 1</article-title>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author">
                    <name>
                        <surname>Ramezani-Jolfaie</surname>
                        <given-names>Nahid</given-names>
                    </name>
                    <xref ref-type="aff" rid="r127522a1">1</xref>
                    <role>Referee</role>
                </contrib>
                <aff id="r127522a1">
                    <label>1</label>Department of Community Medicine, School of Medicine, Hormozgan University of Medical Sciences, Bandar Abbas, Iran</aff>
            </contrib-group>
            <author-notes>
                <fn fn-type="conflict">
                    <p>
                        <bold>Competing interests: </bold>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>13</day>
                <month>6</month>
                <year>2022</year>
            </pub-date>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2022 Ramezani-Jolfaie N</copyright-statement>
                <copyright-year>2022</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access peer review report distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <related-article ext-link-type="doi" id="relatedArticleReport127522" related-article-type="peer-reviewed-article" xlink:href="10.12688/f1000research.75539.1"/>
            <custom-meta-group>
                <custom-meta>
                    <meta-name>recommendation</meta-name>
                    <meta-value>approve-with-reservations</meta-value>
                </custom-meta>
            </custom-meta-group>
        </front-stub>
        <body>
            <p>In this systematic review and meta-analysis, Roth 
                <italic>et al.</italic> examined the effect of exercise training, protein, calcium, and vitamin D supplementation on the preservation of fat-free mass during non-surgical and surgical weight loss and of the combination of all interventions together in adults with obesity. This manuscript deals with an interesting topic. However, there are several points to be addressed. The language needs editing. Furthermore, the process should be thoroughly described. Generally, the paper is well written and the topic is highly relevant. Nevertheless, there are some limitations in this piece of work that could be improved.&#x00a0; 
                <list list-type="bullet">
                    <list-item>
                        <p>The method of the search strategy is faced with limitations. First, the search query is not designed properly, so it could not find all relevant papers, especially the papers that have reported &#x201c;fat free mass&#x201d; and &#x201c;bone mass density&#x201d; as secondary outcomes. Second, some important databases such as PubMed, Scopus, and Embase have been not searched.</p>
                    </list-item>
                    <list-item>
                        <p>Statistical analysis: The authors stated, &#x201c;To have equal scales, outcome data reported in percentages were proportionally converted into Kilograms&#x201d;. So, why did the authors use the SMD? SMD is usually used when studies have reported the outcome variables using different scales and scales cannot be converted to each other.</p>
                    </list-item>
                    <list-item>
                        <p>Eligibility criteria: Did you include also non-randomized studies? Regarding the inclusion of non-RCTs, I highly suggest that the authors include only RCTs or perform subgroup analysis based on randomization.</p>
                    </list-item>
                    <list-item>
                        <p>The section of eligibility criteria lacks any description/definition of high protein. Please describe high protein thoroughly.</p>
                    </list-item>
                    <list-item>
                        <p>From Figure 1, I do not understand what is meant by &#x201c;inadequate patient population&#x201d; and &#x201c;inadequate setting&#x201d;. Please rephrase this to improve clarity.</p>
                    </list-item>
                    <list-item>
                        <p>Certainty of evidence assessment needs to be performed with the GRADE approach and findings to be included in the results section and conclusion section of the abstract.</p>
                    </list-item>
                    <list-item>
                        <p>Please provide information regarding the gender of participants in the table of characteristics of studies.</p>
                    </list-item>
                    <list-item>
                        <p>The manuscript must be also revised with regard to the English language.</p>
                    </list-item>
                </list>
            </p>
            <p>Are the rationale for, and objectives of, the Systematic Review clearly stated?</p>
            <p>Yes</p>
            <p>Is the statistical analysis and its interpretation appropriate?</p>
            <p>Yes</p>
            <p>Are sufficient details of the methods and analysis provided to allow replication by others?</p>
            <p>Partly</p>
            <p>Are the conclusions drawn adequately supported by the results presented in the review?</p>
            <p>Yes</p>
            <p>Reviewer Expertise:</p>
            <p>Nutritionist &amp; Diet therapist</p>
            <p>I confirm that I have read this submission and believe that I have an appropriate level of expertise to confirm that it is of an acceptable scientific standard, however I have significant reservations, as outlined above.</p>
        </body>
        <sub-article article-type="response" id="comment8614-127522">
            <front-stub>
                <contrib-group>
                    <contrib contrib-type="author">
                        <name>
                            <surname>Schorderet</surname>
                            <given-names>Chlo&#x00e9; </given-names>
                        </name>
                        <aff>HES-SO Valais Wallis, Switzerland</aff>
                    </contrib>
                </contrib-group>
                <author-notes>
                    <fn fn-type="conflict">
                        <p>
                            <bold>Competing interests: </bold>No competing interests were disclosed.</p>
                    </fn>
                </author-notes>
                <pub-date pub-type="epub">
                    <day>3</day>
                    <month>8</month>
                    <year>2022</year>
                </pub-date>
            </front-stub>
            <body>
                <p>
                    <bold>Point-to-point </bold>
                    <bold>response</bold> 
                    <list list-type="bullet">
                        <list-item>
                            <p>
                                <bold>Comment 1:</bold>
                            </p>
                        </list-item>
                    </list> The method of the search strategy is faced with limitations. First, the search query is not designed properly, so it could not find all relevant papers, especially the papers that have reported &#x201c;fat free mass&#x201d; and &#x201c;bone mass density&#x201d; as secondary outcomes. Second, some important databases such as PubMed, Scopus, and Embase have been not searched.</p>
                <p> </p>
                <p> 
                    <bold>Authors' response:</bold>
                </p>
                <p> Thank you for this comment. We agree that the search terms for the secondary outcomes were not exhaustive. However, within the manuscript, only an overview of the search terms is presented. We searched the databases with more details as presented in Appendix A. For example, the terms muscle and bone were combined with adjacency of 3 words with the following terms:</p>
                <p> </p>
                <p> #40 ((muscle* or bone*) adj3 {health* or mass* or volume* or strength* or density or lass or augment* or metabolism* or turn?over* or preservation*)).ti,ab,kw.</p>
                <p> </p>
                <p> However, we added this point in the limitations of the manuscript.</p>
                <p> </p>
                <p> Discussion, page 13:</p>
                <p> 
                    <italic>A first limitation concerns the search strategy. Indeed, few synonyms were used for the secondary outcomes.</italic>
                </p>
                <p> </p>
                <p> Regarding the second part of the comment, we followed the recommendations of the Cochrane Handbook for Systematic Reviews of Interventions (https://training.cochrane.org/handbook/current/chapter-04). To clarify, we searched for eligible studies in Medline (using Ovid's search engine). Records were also searched in EMBASE (using Ovid's search engine). In addition, we searched also in Cochrane Central and Web of Science. We believe that the chosen databases fulfilled the requirements of the Cochrane Handbook for Systematic Reviews. 
                    <list list-type="bullet">
                        <list-item>
                            <p>
                                <bold>Comment 2:</bold>
                                <bold>&#x00a0; </bold>
                            </p>
                        </list-item>
                    </list> Statistical analysis: The authors stated, &#x201c;To have equal scales, outcome data reported in percentages were proportionally converted into Kilograms&#x201d;. So, why did the authors use the SMD? SMD is usually used when studies have reported the outcome variables using different scales and scales cannot be converted to each other.</p>
                <p> </p>
                <p> 
                    <bold>Authors' response:</bold>
                </p>
                <p> The selection of the appropriate effect size is controverse discussed in the literature. Several guidelines present opposing recommendations. For example, the Cochrane Collaboration suggests using the MD if all studies used the same outcome measure [1]. In contrast, Borenstein [2] recommends the use of the SMD when the clinical interpretation of outcome measures is not familiar to all readers. The advantage of SMD as an effect size is that there are easily understood rules of thumb that allow for quick interpretation of the effect size. In our case, the interpretation of the reduction of fat-free mass or change in bone mass density is not straightforward and we believe that results are clinically more interpretable when SMDs are used. In addition, Takeshima 
                    <italic>et al.</italic> [3] demonstrated that the SMD is more generalizable than the MD. We adapted the manuscript to clarify this point.</p>
                <p> </p>
                <p> Methods, statistical analysis, page 6:</p>
                <p> 
                    <italic>The SMD was selected as effect size for the meta-analyses because they allow a quick interpretation of the size of the effect. The interpretation of the reduction of fat free mass or a change in bone mass density is not straightforward and we believe that results are clinically more interpretable when SMDs are used. In addition, Takeshima et al. </italic>
                    <italic>[3]</italic>
                    <italic>demonstrated that the SMD is more generalizable than the MD.</italic> 
                    <list list-type="bullet">
                        <list-item>
                            <p>
                                <bold>Comment 3: </bold>
                            </p>
                        </list-item>
                    </list> Eligibility criteria: Did you include also non-randomized studies? Regarding the inclusion of non-RCTs, I highly suggest that the authors include only RCTs or perform subgroup analysis based on randomization.</p>
                <p> </p>
                <p> 
                    <bold>Authors' response:</bold>
                </p>
                <p> Thank you for your comment. Yes, only RCTs were included in this systematic review. We specified this point in the results section.</p>
                <p> </p>
                <p> Results, page 7:</p>
                <p> 
                    <italic>All included studies were randomized controlled studies.</italic> 
                    <list list-type="bullet">
                        <list-item>
                            <p>
                                <bold>Comment 4: </bold>
                            </p>
                        </list-item>
                    </list> The section of eligibility criteria lacks any description/definition of high protein. Please describe high protein thoroughly.</p>
                <p> </p>
                <p> 
                    <bold>Authors' response:</bold>
                </p>
                <p> Thank you for your comment. The term high protein has now been defined in the manuscript.</p>
                <p> </p>
                <p> Results, FFM, effect of diet induced weight loss on FFM, page 8</p>
                <p> 
                    <italic>&#x201c;High Protein&#x201d; meant that the participants exceeded the regular recommendation of 0.8g/kg body weight per day or hit 20% or more of caloric intake from protein </italic>
                    <italic>[4]</italic>
                    <italic>.</italic> 
                    <list list-type="bullet">
                        <list-item>
                            <p>
                                <bold>Comment 5:&#x00a0; </bold>
                            </p>
                        </list-item>
                    </list> From Figure 1, I do not understand what is meant by &#x201c;inadequate patient population&#x201d; and &#x201c;inadequate setting&#x201d;. Please rephrase this to improve clarity.</p>
                <p> </p>
                <p> 
                    <bold>Authors' response:</bold>
                </p>
                <p> Thank you for your comment. This term is indeed imprecise. We have now removed it from the flow chart. The term "inadequate" meant that studies were not included because the comparator/intervention/outcome/patient population/setting/study design did not meet the inclusion criteria. 
                    <list list-type="bullet">
                        <list-item>
                            <p>
                                <bold>Comment 6:</bold>
                            </p>
                        </list-item>
                    </list> Certainty of evidence assessment needs to be performed with the GRADE approach and findings to be included in the results section and conclusion section of the abstract.</p>
                <p> </p>
                <p> 
                    <bold>Authors' response:</bold>
                </p>
                <p> We agree with you that the certainty of evidence should be presented. We added the following sections to the manuscript:</p>
                <p> </p>
                <p> Methods, risk of bias assessment, page 7:</p>
                <p> 
                    <italic>Recommendations from the GRADE working group were used to rate the quality of the available evidence.</italic>
                </p>
                <p> Results, grade level of evidence, page 12:</p>
                <p> 
                    <italic>The level of evidence for each analysis is presented in Appendix F. For diet induced weight loss on FFM the quality of evidence ranged from very low to moderate. The subgroup-analyses with a moderate level were: i) Exercise + High Protein vs. Exercise and ii) Exercise + Calcium + Vitamin D vs. Calcium + Vitamin D. For surgery induced weight loss on FFM the level of evidence ranged between very low and moderate (Exercise + High Protein + Calcium + Vitamin D vs. Vitamin D).</italic>
                </p>
                <p> Discussion, page14:</p>
                <p> 
                    <italic>Another issue is that the quality of evidence measured using the "grade" approach ranged from very low to moderate quality. No analysis was rated as high-quality evidence. Therefore, the true effects might substantially differ from the presented estimated effects.</italic> 
                    <list list-type="bullet">
                        <list-item>
                            <p>
                                <bold>Comment 7: </bold>
                            </p>
                        </list-item>
                    </list> Please provide information regarding the gender of participants in the table of characteristics of studies.</p>
                <p> 
                    <bold>Authors' response:</bold>
                </p>
                <p> Thank you for your comment. We added the gender of participants in the table of characteristics of studies (Appendix C).</p>
                <p> &#x00a0; 
                    <list list-type="bullet">
                        <list-item>
                            <p>
                                <bold>Comment 8:</bold>
                            </p>
                        </list-item>
                    </list> The manuscript must be also revised with regard to the English language.</p>
                <p> </p>
                <p> 
                    <bold>Authors' response:</bold>
                </p>
                <p> Thank you for your comment. We used the services of a copy editor to improve the language.</p>
                <p> </p>
                <p> 
                    <bold>References</bold>
                </p>
                <p> </p>
                <p> [1] Higgins JPT, Thomas J, Chandler J, Cumpston M, Li T, Page MJ, et al. Cochrane Handbook for Systematic Reviews of Interventions version 6.3 (updated February 2022), www.training.cochrane.org/handbook; 2022.</p>
                <p> [2] Borenstein M, Hedges LV, Higgins JP, Rothstein HR. Introduction to meta-analysis. John Wiley &amp; Sons; 2021.</p>
                <p> [3] Takeshima N, Sozu T, Tajika A, Ogawa Y, Hayasaka Y, Furukawa TA. Which is more generalizable, powerful and interpretable in meta-analyses, mean difference or standardized mean difference? BMC medical research methodology 2014;14:1-7</p>
                <p> [4] World Health Organization. Protein and amino acid requirements in human nutrition, Report of a Joint WHO/FAO/UNU Expert Consultation. WHO Technical Report Series. World Health Organization ed. World Health Organization; 2007.</p>
            </body>
        </sub-article>
    </sub-article>
    <sub-article article-type="reviewer-report" id="report125759">
        <front-stub>
            <article-id pub-id-type="doi">10.5256/f1000research.79422.r125759</article-id>
            <title-group>
                <article-title>Reviewer response for version 1</article-title>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author">
                    <name>
                        <surname>Saxer</surname>
                        <given-names>St&#x00e9;phanie</given-names>
                    </name>
                    <xref ref-type="aff" rid="r125759a1">1</xref>
                    <xref ref-type="aff" rid="r125759a2">2</xref>
                    <role>Referee</role>
                    <uri content-type="orcid">https://orcid.org/0000-0002-3278-6277</uri>
                </contrib>
                <aff id="r125759a1">
                    <label>1</label>Ostschweizer Fachhochschule, Departement Gesundheit, St. Gallen, Switzerland</aff>
                <aff id="r125759a2">
                    <label>2</label>Department of Pulmonology, University Hospital Zurich, University of Zurich, Zurich, Switzerland</aff>
            </contrib-group>
            <author-notes>
                <fn fn-type="conflict">
                    <p>
                        <bold>Competing interests: </bold>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>18</day>
                <month>3</month>
                <year>2022</year>
            </pub-date>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2022 Saxer S</copyright-statement>
                <copyright-year>2022</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access peer review report distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <related-article ext-link-type="doi" id="relatedArticleReport125759" related-article-type="peer-reviewed-article" xlink:href="10.12688/f1000research.75539.1"/>
            <custom-meta-group>
                <custom-meta>
                    <meta-name>recommendation</meta-name>
                    <meta-value>approve</meta-value>
                </custom-meta>
            </custom-meta-group>
        </front-stub>
        <body>
            <p>The study of Roth et al. summarizes the effect of exercise training and dietary supplement on fat free mass and bone mass density during weight loss in adults with overweight or obesity.</p>
            <p> </p>
            <p> The study is well designed and reported according to PRISMA guidelines. The study is well written; however, some English corrections need to be done (e.g. was not statistically significant).</p>
            <p> </p>
            <p> 
                <bold>Title:</bold> 
                <list list-type="bullet">
                    <list-item>
                        <p>Change physical activity to exercise training because the study is not about physical activity.</p>
                    </list-item>
                </list> 
                <bold>Abstract:</bold> 
                <list list-type="bullet">
                    <list-item>
                        <p>Omit &#x201c;The effect of calcium and vitamin D supplementation remains controversial and further research are needed.&#x201d; Or add these results in the abstract.</p>
                    </list-item>
                    <list-item>
                        <p>Add that overweight patients were also included.</p>
                    </list-item>
                </list> 
                <bold>Introduction:</bold> 
                <list list-type="bullet">
                    <list-item>
                        <p>Line 7: correct: &#x201c;&#x2026; but also could be cost-effective.&#x201d;</p>
                    </list-item>
                </list> 
                <bold>Methods:</bold> 
                <list list-type="bullet">
                    <list-item>
                        <p>Eligibility criteria: line 4: two times exercise.</p>
                    </list-item>
                    <list-item>
                        <p>Exercise training is a broad term, define it more clearly.</p>
                    </list-item>
                </list> 
                <bold>Results:</bold> 
                <list list-type="bullet">
                    <list-item>
                        <p>Figure 1: please comment on the excluded studies more clearly, what is meant with &#x201c;inadequate&#x201d;.</p>
                    </list-item>
                    <list-item>
                        <p>Figure 2: An explanation of the yellow &#x201c;!&#x201d; is missing.</p>
                    </list-item>
                </list> </p>
            <p> 
                <bold>Discussion:</bold> 
                <list list-type="bullet">
                    <list-item>
                        <p>Last paragraph of the discussion: Please present more details about the effect of different types of exercise training on the preservation of the FFM. Probably your study showed no clear favor of exercise training alone because not the right type of exercise training and intensity was chosen.</p>
                    </list-item>
                    <list-item>
                        <p>You included around 12 studies which were only performed in women. However, there is no statement about this fact. Are there any differences between men and women?</p>
                    </list-item>
                </list>
            </p>
            <p>Are the rationale for, and objectives of, the Systematic Review clearly stated?</p>
            <p>Yes</p>
            <p>Is the statistical analysis and its interpretation appropriate?</p>
            <p>Yes</p>
            <p>Are sufficient details of the methods and analysis provided to allow replication by others?</p>
            <p>Yes</p>
            <p>Are the conclusions drawn adequately supported by the results presented in the review?</p>
            <p>Yes</p>
            <p>Reviewer Expertise:</p>
            <p>exercise, physical activity</p>
            <p>I confirm that I have read this submission and believe that I have an appropriate level of expertise to confirm that it is of an acceptable scientific standard.</p>
        </body>
        <sub-article article-type="response" id="comment8613-125759">
            <front-stub>
                <contrib-group>
                    <contrib contrib-type="author">
                        <name>
                            <surname>Schorderet</surname>
                            <given-names>Chlo&#x00e9; </given-names>
                        </name>
                        <aff>HES-SO Valais Wallis, Switzerland</aff>
                    </contrib>
                </contrib-group>
                <author-notes>
                    <fn fn-type="conflict">
                        <p>
                            <bold>Competing interests: </bold>No competing interests were disclosed.</p>
                    </fn>
                </author-notes>
                <pub-date pub-type="epub">
                    <day>3</day>
                    <month>8</month>
                    <year>2022</year>
                </pub-date>
            </front-stub>
            <body>
                <p>
                    <bold>Point-to-point </bold>
                    <bold>response</bold> 
                    <list list-type="bullet">
                        <list-item>
                            <p>
                                <bold>Comment 1</bold>:</p>
                        </list-item>
                    </list> Change physical activity to exercise training because the study is not about physical activity.</p>
                <p> </p>
                <p> 
                    <bold>Authors' response:</bold>
                </p>
                <p> Thank you for your comment. We replaced the term "physical activity" with the term "exercise training" throughout in the title of the manuscript.</p>
                <p> &#x00a0; 
                    <list list-type="bullet">
                        <list-item>
                            <p>
                                <bold>Comment 2</bold>:</p>
                        </list-item>
                    </list> Omit &#x201c;The effect of calcium and vitamin D supplementation remains controversial and &#x00a0;&#x00a0;&#x00a0; further research are needed.&#x201d; Or add these results in the abstract.</p>
                <p> </p>
                <p> 
                    <bold>Authors' response:</bold>
                </p>
                <p> Thank you for your comment. We omitted the sentence &#x201c;The effect of calcium and vitamin D supplementation remains controversial and further research are needed&#x201d;.</p>
                <p> &#x00a0; 
                    <list list-type="bullet">
                        <list-item>
                            <p>
                                <bold>Comment 3:</bold>
                            </p>
                        </list-item>
                    </list> Add that overweight patients were also included.</p>
                <p> </p>
                <p> 
                    <bold>Authors' response:</bold>
                </p>
                <p> Thank you for your comment. We included this information in the abstract.</p>
                <p> </p>
                <p> Abstract, page 2:</p>
                <p> 
                    <bold>
                        <italic>Methods</italic>
                    </bold>
                    <italic>: A systematic review was performed with a pairwise meta-analysis and an </italic> 
                    <italic>exploratory network meta-analysis according to the PRISMA statement. Studies</italic>&#x00a0;
                    <italic>assessing adults with overweight or obesity undergoing a weight loss and without </italic>
                    <italic>secondary diagnosis limiting their exercise activity were included.</italic>
                </p>
                <p> &#x00a0; 
                    <list list-type="bullet">
                        <list-item>
                            <p>
                                <bold>Comment 4:</bold>
                            </p>
                        </list-item>
                    </list> Line 7: correct: &#x201c;&#x2026; but also could be cost-effective.&#x201d;</p>
                <p> </p>
                <p> 
                    <bold>Authors' response:</bold>
                </p>
                <p> Thank you for your comment. We modified the sentence.</p>
                <p> </p>
                <p> Introduction, page 4:</p>
                <p> 
                    <italic>The literature reports that weight loss within this range not only has a beneficial </italic>
                    <italic>impact on several obesity-related health conditions and co-morbidities but can also </italic>&#x00a0; 
                    <italic>be cost-effective.</italic>
                </p>
                <p> &#x00a0; 
                    <list list-type="bullet">
                        <list-item>
                            <p>
                                <bold>Comment 5: </bold>
                            </p>
                        </list-item>
                    </list> Eligibility criteria: line 4: two times exercise.</p>
                <p> </p>
                <p> 
                    <bold>Authors' response:</bold>
                </p>
                <p> Thank you very much. We corrected this error of inattention.</p>
                <p> &#x00a0; 
                    <list list-type="bullet">
                        <list-item>
                            <p>
                                <bold>Comment 6</bold>:</p>
                        </list-item>
                    </list> Exercise training is a broad term, define it more clearly</p>
                <p> </p>
                <p> 
                    <bold>Authors' response:</bold>
                </p>
                <p> Thank you for your comment. The exercise regimen has been defined according to the physical activity guidelines by the WHO [1]. The term exercise training, therefore, meant the performance of &#x201c;at least 150&#x2013;300 minutes of moderate-intensity aerobic physical activity; or at least 75&#x2013;150 minutes of vigorous intensity aerobic physical activity; or an equivalent combination of moderate- and vigorous-intensity activity throughout the week&#x201d; (p. 2) [1], or the performance of &#x201c;muscle strengthening activities at moderate or greater intensity that involve all major muscle groups on 2 or more days a week&#x201d; (p. 2) [1]. We adapted the manuscript in order to clarify this point.</p>
                <p> </p>
                <p> Method, eligibility criteria, pages 4 and 5:</p>
                <p> 
                    <italic>Considered were randomized controlled trials or clinical trials comparing exercise training (defined as &#x201c;at least 150&#x2013;300 minutes of moderate-intensity aerobic physical activity; or at least 75&#x2013;150 minutes of vigorous intensity aerobic physical activity; or an equivalent combination of moderate- and vigorous-intensity activity throughout the week&#x201d; (p. 2), or as &#x201c;muscle strengthening activities at moderate or greater intensity that involve all major muscle groups on 2 or more days a week&#x201d; (p. 2) according to the WHO </italic>
                    <italic>[1]</italic>
                    <italic>) alone or in combination with dietary supplementation (protein, calcium and/or vitamin D) with a placebo intervention, controlled comparison intervention or standard care.</italic>
                </p>
                <p> &#x00a0; 
                    <list list-type="bullet">
                        <list-item>
                            <p>
                                <bold>Comment 7: </bold>
                            </p>
                        </list-item>
                    </list> Figure 1: please comment on the excluded studies more clearly, what is meant with &#x201c;inadequate&#x201d;. -&gt; can you expand on inclusion criteria for each &#x201c;inadequate statement&#x201d;</p>
                <p> </p>
                <p> 
                    <bold>Authors' response:</bold>
                </p>
                <p> Thank you for your comment. This term is indeed imprecise. We have now removed it from the flow chart. The term "inadequate" meant that studies were not included because the comparator/intervention/outcome/patient population/setting/study design did not meet the inclusion criteria.</p>
                <p> &#x00a0; 
                    <list list-type="bullet">
                        <list-item>
                            <p>
                                <bold>Comment 8:</bold>
                            </p>
                        </list-item>
                    </list> Figure 2: An explanation of the yellow &#x201c;!&#x201d; is missing.</p>
                <p> </p>
                <p> 
                    <bold>Authors' response:</bold>
                </p>
                <p> Thank you for your comment. We added the meaning of the yellow &#x201c;!&#x201d; in the legend of Figure 2.</p>
                <p> </p>
                <p> Page 9</p>
                <p> 
                    <italic>Figure 2. Risk of bias according to the revised Cochrane risk-of-bias tool for randomized trials (RoB 2.0). </italic>
                    <italic>NB. &#x201c;!&#x201d; in the &#x201c;overall&#x201d; category corresponds to "Some concerns".</italic>
                    <italic>&#x00a0;</italic>
                </p>
                <p> &#x00a0; 
                    <list list-type="bullet">
                        <list-item>
                            <p>
                                <bold>Comment 9</bold>:</p>
                        </list-item>
                    </list> Last paragraph of the discussion: Please present more details about the effect of different types of exercise training on the preservation of the FFM. Probably your study showed no clear favor of exercise training alone because not the right type of exercise training and intensity was chosen.</p>
                <p> </p>
                <p> 
                    <bold>Authors' response:</bold>
                </p>
                <p> Thank you for your comment. We added information in the results and in the discussion to clarify this point.</p>
                <p> </p>
                <p> Results, page 8</p>
                <p> 
                    <italic>All exercises interventions are described in Appendix C. Among the group of exercise training alone, different training modalities were used. Some had strength and other endurance training and among those who had the strength training different training parameters were chosen (i.e. different training volumes and intensities).</italic>
                </p>
                <p> </p>
                <p> Discussion, page 16:</p>
                <p> 
                    <italic>We should also mention that all the types of exercise reported in our review were classified as &#x201c;exercise therapy&#x201d;, with no distinctions made between strength training and endurance training, even though these do not have the same effects on the preservation of FFM </italic>
                    <italic>[2]</italic>
                    <italic>. Some of the chosen training modalities do not target an increase in muscle mass or a decrease in fat mass which might underestimate the effectiveness on the outcome FFM. </italic>
                </p>
                <p> &#x00a0; 
                    <list list-type="bullet">
                        <list-item>
                            <p>
                                <bold>Comment 10: </bold>
                            </p>
                        </list-item>
                    </list> You included around 12 studies which were only performed in women. However, there is no statement about this fact. Are there any differences between men and women?</p>
                <p> </p>
                <p> 
                    <bold>Authors' response:</bold>
                </p>
                <p> You are right this is important to consider. We added two sentences about this point in the discussion. In addition, we also added this variable in Appendix C.</p>
                <p> </p>
                <p> Discussion, page 13:</p>
                <p> 
                    <italic>Another limitation is that 12 of the 31 included studies evaluated only women. Therefore, it could be difficult to generalize the findings of this review to a mixed or to a male population.</italic>
                    <italic> </italic>
                </p>
                <p> </p>
                <p> </p>
                <p> 
                    <bold>References</bold>
                </p>
                <p> </p>
                <p> [1] WHO guidelines on physical activity and sedentary behaviour. Geneva: World Health Organization; 2020.</p>
                <p> [2] Willis LH, Slentz CA, Bateman LA, Shields AT, Piner LW, Bales CW, et al. Effects of aerobic and/or resistance training on body mass and fat mass in overweight or obese adults. J Appl Physiol (1985) 2012;113:1831-7. doi: 10.1152/japplphysiol.01370.2011</p>
            </body>
        </sub-article>
    </sub-article>
</article>
