<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Publishing DTD v1.2 20190208//EN" "http://jats.nlm.nih.gov/publishing/1.2/JATS-journalpublishing1.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" article-type="other" dtd-version="1.2" xml:lang="en">
    <front>
        <journal-meta>
            <journal-id journal-id-type="pmc">F1000Research</journal-id>
            <journal-title-group>
                <journal-title>F1000Research</journal-title>
            </journal-title-group>
            <issn pub-type="epub">2046-1402</issn>
            <publisher>
                <publisher-name>F1000 Research Limited</publisher-name>
                <publisher-loc>London, UK</publisher-loc>
            </publisher>
        </journal-meta>
        <article-meta>
            <article-id pub-id-type="doi">10.12688/f1000research.137428.1</article-id>
            <article-categories>
                <subj-group subj-group-type="heading">
                    <subject>Policy Brief</subject>
                </subj-group>
                <subj-group>
                    <subject>Articles</subject>
                </subj-group>
            </article-categories>
            <title-group>
                <article-title>Multi-drug resistant Salmonella typhi: why should African countries move quickly toward adopting typhoid conjugate vaccine</article-title>
                <fn-group content-type="pub-status">
                    <fn>
                        <p>[version 1; peer review: 1 approved with reservations]</p>
                    </fn>
                </fn-group>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author" corresp="yes">
                    <name>
                        <surname>Lubanga</surname>
                        <given-names>Adriano</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Project Administration</role>
                    <role content-type="http://credit.niso.org/">Supervision</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <uri content-type="orcid">https://orcid.org/0000-0002-5491-5412</uri>
                    <xref ref-type="corresp" rid="c1">a</xref>
                    <xref ref-type="aff" rid="a1">1</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Bwanali</surname>
                        <given-names>Akim Nelson</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <uri content-type="orcid">https://orcid.org/0009-0005-2070-0041</uri>
                    <xref ref-type="aff" rid="a1">1</xref>
                    <xref ref-type="aff" rid="a2">2</xref>
                </contrib>
                <aff id="a1">
                    <label>1</label>Research, Clinical Research Education and Management Services Ltd (CREAMS), Lilongwe, 31045, Malawi</aff>
                <aff id="a2">
                    <label>2</label>Biomedical Sciences, Kamuzu University of Health Sciences, Blantyre, 360, Malawi</aff>
            </contrib-group>
            <author-notes>
                <corresp id="c1">
                    <label>a</label>
                    <email xlink:href="mailto:lubangafocusadriano1@gmail.com">lubangafocusadriano1@gmail.com</email>
                </corresp>
                <fn fn-type="conflict">
                    <p>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>10</day>
                <month>8</month>
                <year>2023</year>
            </pub-date>
            <pub-date pub-type="collection">
                <year>2023</year>
            </pub-date>
            <volume>12</volume>
            <elocation-id>963</elocation-id>
            <history>
                <date date-type="accepted">
                    <day>29</day>
                    <month>6</month>
                    <year>2023</year>
                </date>
            </history>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2023 Lubanga A and Bwanali AN</copyright-statement>
                <copyright-year>2023</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <self-uri content-type="pdf" xlink:href="https://f1000research.com/articles/12-963/pdf"/>
            <abstract>
                <p>Africa has a high burden of typhoid fever causing significant morbidity and mortality especially among children. Over the years there has been increased development of Multi-drug and Extensively drug resistance typhoid strains in the continent which threatens typhoid treatment. This is compounded by a background that most African countries have limited diagnostic capacity, leading to high empiric use of antibiotics, and worsening of antimicrobial resistance. Access to safe drinking water, hygiene and sanitation facilities also remains a significant challenge for most countries.In this policy brief, we encourage African countries to consider quick adoption of highly efficacious and cost-effective available typhoid conjugate vaccines.</p>
            </abstract>
            <kwd-group kwd-group-type="author">
                <kwd>Typhoid Fever</kwd>
                <kwd>Multi-drug Resistance typhoid</kwd>
                <kwd>Typhoid Congugate Vaccine</kwd>
                <kwd>Extensive Drug Resistance Typhoid</kwd>
            </kwd-group>
            <funding-group>
                <funding-statement>The author(s) declared that no grants were involved in supporting this work.</funding-statement>
            </funding-group>
        </article-meta>
    </front>
    <body>
        <sec id="sec1" sec-type="intro">
            <title>Introduction</title>
            <p>Typhoid fever remains a significant public health burden resulting in high morbidity and mortality among millions of individuals in resource-constrained settings.
                <sup>
                    <xref ref-type="bibr" rid="ref1">1</xref>
                </sup> Typhoid fever is caused by the bacterium 
                <italic toggle="yes">Salmonella</italic> Typhi and is spread mainly through the ingestion of contaminated food or water. While the disease has been largely eliminated in higher-income countries with modern sanitary facilities and safe drinking water, it still persists as a significant public health issue in many low- and middle-income countries (LMICs) worldwide.
                <sup>
                    <xref ref-type="bibr" rid="ref2">2</xref>
                </sup>
                <sup>,</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref3">3</xref>
                </sup> This public health threat is further compounded by the emergent multi-drug resistant strains (H58 
                <italic toggle="yes">Salmonella).</italic> These multi-drug resistant strains have been on the rise especially in sub-Saharan Africa (SSA) and leads to prolonged illness and severe complications.
                <sup>
                    <xref ref-type="bibr" rid="ref4">4</xref>
                </sup>
            </p>
            <p>
                <italic toggle="yes">S.</italic> Typhi has reportedly been cultured from patients in 42 of 57 African countries until 2018. However, this could result from limited diagnostic capacities and underreporting in the remaining 15 countries.
                <sup>
                    <xref ref-type="bibr" rid="ref5">5</xref>
                </sup> Many studies in Africa have reported an incidence rate that is similar to or even higher than that reported in South/Southeast Asia.
                <sup>
                    <xref ref-type="bibr" rid="ref5">5</xref>
                </sup>
                <sup>,</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref6">6</xref>
                </sup> A 2019 comprehensive review estimated the African incidence of typhoid fever from previous results and presented an initial pooled estimate of 112.1/100,000 person-years, with a 95% confidence interval (CI) of 46.7&#x2013;203.5.
                <sup>
                    <xref ref-type="bibr" rid="ref7">7</xref>
                </sup> This high incidence may likely be compounded by the impact of climate change in some countries in Southern parts of Africa.
                <sup>
                    <xref ref-type="bibr" rid="ref8">8</xref>
                </sup> With such a huge impact of the disease on households, and health care systems, more innovative preventive efforts are required to curb the spread of the disease. Introduction of Typhoid conjugate vaccine (TCV) offers a new hope in addressing the enduring problem of typhoid fever as well as the evolving problem of multi-drug resistance in affected regions.</p>
        </sec>
        <sec id="sec2">
            <title>Typhoid fever; current treatment options, development of multi-drug resistance, and economic impact of the disease</title>
            <p>Antibiotics have offered the most effective way to treat typhoid fever since 1940&#x2019;s. Chloramphenicol, co-trimoxazole and ampicillin were the first recommended antibiotic treatment options for typhoid fever.
                <sup>
                    <xref ref-type="bibr" rid="ref9">9</xref>
                </sup> Even though the antibiotics were highly effective during inception, the bacterium has evolved quite quickly, rendering most of them ineffective. Multi-drug resistant (MDR) typhoid, (resistance to chloramphenicol, ampicillin, and co-trimoxazole) first appeared in the 1970&#x2019;s and has since spread globally.
                <sup>
                    <xref ref-type="bibr" rid="ref9">9</xref>
                </sup> In the last decade, several regions in Africa have reported typhoid outbreaks, and these have been closely linked with MDR phenotypes, H58.S.
                <sup>
                    <xref ref-type="bibr" rid="ref9">9</xref>
                </sup> This strain has been isolated in many parts of the world including SSA. Owing to the rapid rise of MDR strains, fluoroquinolones, azithromycin and third-generation cephalosporins were eventually recommended as second line and third line treatment options respectively. However, since 2016, extensive drug resistant strains (resistant to chloramphenicol, ampicillin, co-trimoxazole, streptomycin, fluoroquinolones, and third-generation cephalosporins) have been reported in Pakistan.
                <sup>
                    <xref ref-type="bibr" rid="ref10">10</xref>
                </sup> This renders azithromycin as the only effective oral treatment option for typhoid. The emergence of these extensively drug resistant strains with a high potential to spread to other regions poses significant concerns to treatment of typhoid as treatment options are limited. Furthermore, most African countries have limited diagnostic capacity leading to increase in empiric treatment of infections, and eventually overuse of antibiotics.
                <sup>
                    <xref ref-type="bibr" rid="ref11">11</xref>
                </sup> This will likely worsen the development of resistant strains and render all available treatment options ineffective.</p>
            <p>Intravenous antibiotics required in advanced, severe typhoid disease are more expensive and less readily accessible in most health care centers/facilities.
                <sup>
                    <xref ref-type="bibr" rid="ref12">12</xref>
                </sup> In most developing countries, these antibiotics are mostly found in referral hospitals. This poses a significant economic burden on households as they must travel long distance to access care. Drug resistant cases leads to prolonged hospitalization, high case fatality and morbidity leading to increased pressure on health care systems.
                <sup>
                    <xref ref-type="bibr" rid="ref12">12</xref>
                </sup>
            </p>
        </sec>
        <sec id="sec3">
            <title>Typhoid conjugate vaccine: A new hope for Africa</title>
            <p>Increase in MDR and emergence of extensively resistant strains highlight the need for urgent escalation of preventive efforts such as adoption of Typhoid Conjugate Vaccine (TCV) and improvement in Water, Sanitation and Hygiene (WASH) facilities. However, the former offers a better option in most African countries where hope for improving water supply systems and hygiene practices has greatly staggered for a century. Approximately, 418 million people still lack even a basic level of drinking water service, 779 million lack basic sanitation services (including 208 million who still practice open defecation) and 839 million still lack basic hygiene services.
                <sup>
                    <xref ref-type="bibr" rid="ref13">13</xref>
                </sup> With such threatening figures on inequitable access to safe drinking water and sanitation facilities, perhaps two more decades would elapse to alleviate the challenge. The problem is more likely to be compounded by the effects of Climate change, which further leads to disruption of WASH facilities. The cases of water borne diseases are likely to be on the increase, and typhoid is not an exception.</p>
            <p>The TCV is highly effective and efficacious. The vaccine was prequalified for use for control of typhoid fever by WHO in 2018. The Vaccine is administered in a single dose and approved for children six months of age and older. Large Phase 3 efficacy studies conducted in 
                <ext-link ext-link-type="uri" xlink:href="https://www.coalitionagainsttyphoid.org/tcv-is-85-efficacious-and-urgently-needed-for-bangladeshi-children/">Bangladesh</ext-link>, 
                <ext-link ext-link-type="uri" xlink:href="https://www.coalitionagainsttyphoid.org/now-we-know-typhoid-conjugate-vaccines-are-highly-effective-in-african-children/">Malawi</ext-link>, and 
                <ext-link ext-link-type="uri" xlink:href="https://www.coalitionagainsttyphoid.org/long-term-protection-against-typhoid-for-children-in-nepal/">Nepal</ext-link> show that Typbar TCV is safe and highly effective, preventing 85%, 84%, and 79% of typhoid cases in vaccinated children, respectively.
                <sup>
                    <xref ref-type="bibr" rid="ref14">14</xref>
                </sup> A recent phase 3 trial report from Malawi has also demonstrated the longer durability of protection, with little decrease in efficacy for up to 48 months. An age stratified analysis from the same study also demonstrated that the vaccine is efficacious in all age groups, including children &lt;2 years old.
                <sup>
                    <xref ref-type="bibr" rid="ref4">4</xref>
                </sup>
            </p>
            <p>Despite being highly efficacious and prequalified by the WHO nearly four years ago, Most African countries haven&#x2019;t adopted the TCV into their routine immunization programs.</p>
        </sec>
        <sec id="sec4">
            <title>Policy outcomes and implications</title>
            <p>Even though improving WASH facilities offers a longer term and most effective option for controlling typhoid fever, most African countries are far from achieving that. Adopting the TCV is not only the most effective approach, but also a cost-effective immediate solution for Africa. TCV can be administered as reactive campaign or as part of national preventive efforts. Studies have demonstrated reactive vaccination to be cost-effective if delays in vaccine deployment are minimal; otherwise, introduction of preventive routine immunisation with a catch-up campaign is the preferred strategy.
                <sup>
                    <xref ref-type="bibr" rid="ref15">15</xref>
                </sup> Countries such as Zimbabwe, Liberia, and Malawi in partnership with international organizations have moved and adopted TCV into a routine immunization program. TCV has also shown to have a major role not only in reducing the burden of typhoid but also preventing the spread of drug-resistant typhoid strains. A recent modelling analysis projected that TCV introduction with catch-up campaigns could drastically reduce the number of drug-resistant typhoid cases and deaths.
                <sup>
                    <xref ref-type="bibr" rid="ref16">16</xref>
                </sup> This analysis further predicts that two-thirds of cases and deaths due to fluoroquinolone resistant- and MDR typhoid could be averted through TCV introduction and the proportion of typhoid cases that are drug resistant could decrease by more than 16% in Gavi, the Vaccine Alliance-eligible countries over ten years. With the weakening pipeline in development of new antibiotics, TCV offers a new hope to most developing countries in Africa.</p>
            <p>Furthermore, studies done in Malawi indicate that typhoid can be economically catastrophic for families, despite accessible free medical care.
                <sup>
                    <xref ref-type="bibr" rid="ref17">17</xref>
                </sup> The disease is also costly for government healthcare provision. With the high economic burden of the disease on family and increased pressure on health care systems, studies have demonstrated that introduction of routine immunization with TCV along with a catch-up campaign in children aged less than 15 years could be a cost-effective solution to combat the burden of typhoid fever, especially in countries with high typhoid incidence receiving Gavi support.</p>
        </sec>
        <sec id="sec5">
            <title>Actionable recommendations </title>
            <p>
                <list list-type="order">
                    <list-item>
                        <label>1.</label>
                        <p>African countries should enhance cross-cutting typhoid research to establish determinants of the diseases and identify delivery approaches that optimize the effectiveness of TCV. This could ensure implementation of interventions in line with local contexts, thereby enhancing the odds of achieving desired effectiveness.</p>
                    </list-item>
                    <list-item>
                        <label>2.</label>
                        <p>Additionally, African countries should assess the economic impact and local feasibility of introducing TCV and move quickly toward adopting TCV, especially in typhoid endemic regions to control the disease and reduce spread of drug resistant strains. Due to potential low supplies of the vaccine, vaccination should be prioritized towards at risk populations in endemic countries that include children, adolescents and laboratory workers. This could be achieved by setting up and empowering taskforces that coordinate responses to MDR typhoid fever and suggest effective approaches for introducing the TCV.</p>
                    </list-item>
                    <list-item>
                        <label>3.</label>
                        <p>Strengthen disease surveillance and improve diagnostic capability for timely accurate detection and initiation of appropriate treatment for Enteric infections. This requires adequate equipment and human resource which remains a huge challenge in Africa. Therefore, this calls for sufficient financing that is driven by strong political commitment towards typhoid disease prevention and control. Additional funding may need to be secured from local and international health stakeholders.</p>
                    </list-item>
                    <list-item>
                        <label>4.</label>
                        <p>Improve access to WASH facilities as part of long-term preventive efforts for typhoid fever. Basic WASH packages along with health education on WASH utilization should be conducted in communities. This requires involvement of multiple stakeholders including district health management teams, community-based healthcare workers and community leader. WASH interventions together with vaccination form a vital integrated and comprehensive approach that is of utmost significance because typhoid transmission and development of drug resistance is multifaceted and dynamic.</p>
                    </list-item>
                    <list-item>
                        <label>5.</label>
                        <p>Ensure sustainability of intervention programmes. Due to the ever-evolving nature of MDR typhoid fever, vaccination programmes should be sustainable and fully include the communities. This could be done by integrating TCV into routine immunisation and conducting regular outreach clinics to ensure access of the vaccine for hard-to-reach communities.</p>
                    </list-item>
                </list>
            </p>
        </sec>
        <sec id="sec6" sec-type="conclusions|discussion">
            <title>Conclusions</title>
            <p>The burden of typhoid fever is worsened by growing concerns about drug resistance. In view of the MDR typhoid in Africa highlighted in this article, it is imperative that countries adopt and adapt global policies for contextually appropriate use of TCV. Countries need to identify typhoid research priorities and set up typhoid national action plans (NAP) to oversee all collaborative efforts against MDR typhoid strains. The NAPs should outline a comprehensive prevention approach that should involve multiple stakeholders from the designing stage up to implementation.</p>
        </sec>
    </body>
    <back>
        <sec id="sec9" sec-type="data-availability">
            <title>Data availability</title>
            <p>The data analysed during the development of this article is available and can be provided upon a reasonable request made to the corresponding author.</p>
        </sec>
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    <sub-article article-type="reviewer-report" id="report239402">
        <front-stub>
            <article-id pub-id-type="doi">10.5256/f1000research.150588.r239402</article-id>
            <title-group>
                <article-title>Reviewer response for version 1</article-title>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author">
                    <name>
                        <surname>Rupali</surname>
                        <given-names>Priscilla</given-names>
                    </name>
                    <xref ref-type="aff" rid="r239402a1">1</xref>
                    <role>Referee</role>
                </contrib>
                <aff id="r239402a1">
                    <label>1</label>Department of Infectious Diseases, Christian Medical College, Vellore, Tamil Nadu, India</aff>
            </contrib-group>
            <author-notes>
                <fn fn-type="conflict">
                    <p>
                        <bold>Competing interests: </bold>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>29</day>
                <month>8</month>
                <year>2024</year>
            </pub-date>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2024 Rupali P</copyright-statement>
                <copyright-year>2024</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access peer review report distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <related-article ext-link-type="doi" id="relatedArticleReport239402" related-article-type="peer-reviewed-article" xlink:href="10.12688/f1000research.137428.1"/>
            <custom-meta-group>
                <custom-meta>
                    <meta-name>recommendation</meta-name>
                    <meta-value>approve-with-reservations</meta-value>
                </custom-meta>
            </custom-meta-group>
        </front-stub>
        <body>
            <p>The arguments are presented adequately. However, epidemiology of typhoid in Africa could have presented better. Changing epidemiology from SETA and TSAP could be presented.</p>
            <p> Economic burden needs a little bit of detailed expansion and suitable references.</p>
            <p> Treatment options that are being considered for XDR and MDR typhoid could be elaborated upon. There is data from other African countries now not just Malawi and that should be referenced.</p>
            <p>Does the paper provide a comprehensive overview of the policy and the context of its implementation in a way which is accessible to a general reader?</p>
            <p>Partly</p>
            <p>Is the discussion on the implications clearly and accurately presented and does it cite the current literature?</p>
            <p>Yes</p>
            <p>Are the recommendations made clear, balanced, and justified on the basis of the presented arguments?</p>
            <p>Yes</p>
            <p>Reviewer Expertise:</p>
            <p>Infectious Diseases</p>
            <p>I confirm that I have read this submission and believe that I have an appropriate level of expertise to confirm that it is of an acceptable scientific standard, however I have significant reservations, as outlined above.</p>
        </body>
    </sub-article>
</article>
