<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Publishing DTD v1.2 20190208//EN" "http://jats.nlm.nih.gov/publishing/1.2/JATS-journalpublishing1.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" article-type="systematic-review" dtd-version="1.2" xml:lang="en">
    <front>
        <journal-meta>
            <journal-id journal-id-type="pmc">F1000Research</journal-id>
            <journal-title-group>
                <journal-title>F1000Research</journal-title>
            </journal-title-group>
            <issn pub-type="epub">2046-1402</issn>
            <publisher>
                <publisher-name>F1000 Research Limited</publisher-name>
                <publisher-loc>London, UK</publisher-loc>
            </publisher>
        </journal-meta>
        <article-meta>
            <article-id pub-id-type="doi">10.12688/f1000research.147482.1</article-id>
            <article-categories>
                <subj-group subj-group-type="heading">
                    <subject>Systematic Review</subject>
                </subj-group>
                <subj-group>
                    <subject>Articles</subject>
                </subj-group>
            </article-categories>
            <title-group>
                <article-title>The role of therapeutic MicroRNA in arteriogenesis process in limb ischemia: A systematic review</article-title>
                <fn-group content-type="pub-status">
                    <fn>
                        <p>[version 1; peer review: 1 approved with reservations]</p>
                    </fn>
                </fn-group>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author" corresp="yes">
                    <name>
                        <surname>Ismail</surname>
                        <given-names>Muhamad Taufik</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <role content-type="http://credit.niso.org/">Formal Analysis</role>
                    <role content-type="http://credit.niso.org/">Investigation</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Project Administration</role>
                    <role content-type="http://credit.niso.org/">Resources</role>
                    <role content-type="http://credit.niso.org/">Software</role>
                    <role content-type="http://credit.niso.org/">Supervision</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <uri content-type="orcid">https://orcid.org/0000-0002-8239-997X</uri>
                    <xref ref-type="corresp" rid="c1">a</xref>
                    <xref ref-type="aff" rid="a1">1</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Anggrahini</surname>
                        <given-names>Dyah Wulan</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <role content-type="http://credit.niso.org/">Investigation</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Project Administration</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <xref ref-type="aff" rid="a1">1</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Haryana</surname>
                        <given-names>Sofia Mubarika</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Investigation</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Project Administration</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <xref ref-type="aff" rid="a2">2</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Setianto</surname>
                        <given-names>Budi Yuli</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Supervision</role>
                    <role content-type="http://credit.niso.org/">Validation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <xref ref-type="aff" rid="a1">1</xref>
                </contrib>
                <aff id="a1">
                    <label>1</label>Cardiology and Vascular Medicine, Faculty of Medicine, Public Health, and Nursing, Gadjah Mada University, Yogyakarta, Special Region of Yogyakarta, 55281, Indonesia</aff>
                <aff id="a2">
                    <label>2</label>Histology and Cell Biology, Faculty of Medicine, Public Health, and Nursing, Gadjah Mada University, Yogyakarta, Special Region of Yogyakarta, 55281, Indonesia</aff>
            </contrib-group>
            <author-notes>
                <corresp id="c1">
                    <label>a</label>
                    <email xlink:href="mailto:mutaufiq_is@yahoo.com">mutaufiq_is@yahoo.com</email>
                </corresp>
                <fn fn-type="conflict">
                    <p>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>9</day>
                <month>5</month>
                <year>2024</year>
            </pub-date>
            <pub-date pub-type="collection">
                <year>2024</year>
            </pub-date>
            <volume>13</volume>
            <elocation-id>470</elocation-id>
            <history>
                <date date-type="accepted">
                    <day>29</day>
                    <month>4</month>
                    <year>2024</year>
                </date>
            </history>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2024 Ismail MT et al.</copyright-statement>
                <copyright-year>2024</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <self-uri content-type="pdf" xlink:href="https://f1000research.com/articles/13-470/pdf"/>
            <abstract>
                <sec>
                    <title>Background</title>
                    <p>Chronic limb-threatening ischemia (CLTI) is the most advanced stage of peripheral artery disease (PAD) and has poor clinical outcomes. Recently, stimulating arteriogenesis has been proposed to improve clinical outcomes. Several studies have shown that miRNAs have beneficial effects on limb ischemia related to arteriogenesis. This study aimed to review the roles of therapeutic miRNAs in the arteriogenesis of limb ischemia.</p>
                </sec>
                <sec>
                    <title>Methods</title>
                    <p>A systematic search was conducted through July 2021 using the PubMed, Scopus, and ScienceDirect databases. Two authors independently assessed studies that investigated the role of miRNAs in the arteriogenesis of limb ischemia, both in vivo and in clinical studies.</p>
                </sec>
                <sec>
                    <title>Results</title>
                    <p>All selected studies were in vivo studies, with a total of 36 articles and 28 types of miRNAs. miRNAs potentially regulate arteriogenesis by targeting different targets. The following miRNAs were upregulated to enhance arteriogenesis: miRNA-126-3p, -93, -675, -143-3p, -130a, -210, -146b, -21, -let-7g, -132/212, -150, and 155. Meanwhile, microRNAs needed to be downregulated, namely: miRNA-939-5p, -503, -199a-5p, -146a, -92a, -14q32 microRNA gene cluster, -15a/16, -100, -133a, -139-5p, -223, -352, -615-5p, -15b/5p, -124-3p, and 29a. MiRNA-126 was the most studied miRNA, and SPRED1 was the most common target of microRNA. However, the included studies showed high heterogeneity in terms of inducing hindlimb ischemia, the timing of administration, and the method used for evaluating arteriogenesis. Moreover, most studies presented unclear or high-risk bias.</p>
                </sec>
                <sec>
                    <title>Conclusion</title>
                    <p>MicroRNA application in a preclinical model of hindlimb ischemia has beneficial effects on arteriogenesis. This result indicates that miRNAs might be potentially beneficial in patients with CLTI.</p>
                </sec>
                <sec>
                    <title>Registration</title>
                    <p>The review protocol was registered with PROSPERO under registration number CRD42024484988.</p>
                </sec>
            </abstract>
            <kwd-group kwd-group-type="author">
                <kwd>Keywords: microRNA</kwd>
                <kwd>arteriogenesis</kwd>
                <kwd>limb ischemia</kwd>
                <kwd>gene target</kwd>
            </kwd-group>
            <funding-group>
                <funding-statement>The author(s) declared that no grants were involved in supporting this work.</funding-statement>
            </funding-group>
        </article-meta>
    </front>
    <body>
        <sec id="sec6" sec-type="intro">
            <title>Introduction</title>
            <p>Chronic limb-threatening ischemia (CLTI) is a severe form of peripheral artery disease (PAD) due to the blockage of blood vessels.
                <sup>
                    <xref ref-type="bibr" rid="ref1">1</xref>
                </sup> Its amputation and mortality rates using a conservative approach are still high at 27% and 18% at 12 months after diagnosis, respectively,
                <sup>
                    <xref ref-type="bibr" rid="ref2">2</xref>
                </sup> despite being successfully revascularized.
                <sup>
                    <xref ref-type="bibr" rid="ref3">3</xref>
                </sup>
                <sup>,</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref4">4</xref>
                </sup> Patients who present with late-onset and severe degree of tissue damage have the highest risk of amputation.
                <sup>
                    <xref ref-type="bibr" rid="ref4">4</xref>
                </sup> Therefore, other therapeutic approaches need to be developed.</p>
            <p>Genetic or cellular-based therapeutic approaches have been developed to increase neovascularization in the form of arteriogenesis and angiogenesis.
                <sup>
                    <xref ref-type="bibr" rid="ref1">1</xref>
                </sup> Unfortunately, angiogenesis is inadequate for replacing occluded or stenotic arteries. Furthermore, the long distance between the stenotic vessel and tissue hypoperfusion makes it more relevant to arteriogenesis than angiogenesis.
                <sup>
                    <xref ref-type="bibr" rid="ref5">5</xref>
                </sup> Therefore, patients with CLTI generally require more arteriogenesis than angiogenesis.
                <sup>
                    <xref ref-type="bibr" rid="ref6">6</xref>
                </sup>
            </p>
            <p>Studies on stem cell therapy for CLTI in clinical studies recently has not yet shown promising outcome.
                <sup>
                    <xref ref-type="bibr" rid="ref1">1</xref>
                </sup> It is possibly due to inability of stem cells in the ischemic condition.
                <sup>
                    <xref ref-type="bibr" rid="ref6">6</xref>
                </sup> Similar result occurred with the trials of growth factors administration in CLTI patients.
                <sup>
                    <xref ref-type="bibr" rid="ref7">7</xref>
                </sup> The expectation of increase neovascularization to compensate the ischemic limb, comes into a failure due to angiogenic signaling resistance. Therefore, the findings of miRNA signaling might be a solution for repairing the angiogenic signaling pathway or its resistance.
                <sup>
                    <xref ref-type="bibr" rid="ref8">8</xref>
                </sup>
            </p>
            <p>Several miRNAs can improve arteriogenesis through different signaling pathways, either by increasing or inhibiting their expression depending on a specific type of miRNA.
                <sup>
                    <xref ref-type="bibr" rid="ref8">8</xref>
                </sup> Arteriogenesis consists of two phases: an early inflammatory phase followed by an increase in blood vessel diameter, remodeling, and vessel maturation. Furthermore, several processes including proliferation of endothelial cells, smooth muscle cells, and remodeling of tunica adventitia are also essential for arteriogenesis.
                <sup>
                    <xref ref-type="bibr" rid="ref9">9</xref>
                </sup> MicroRNAs can interfere those processes through gene regulation, since several genes are needed, particularly involved in the proliferation of endothelial cells, smooth muscle cells, activation of adhesion molecules, regulation of extracellular matrix, and regulation of growth factors and their receptors.
                <sup>
                    <xref ref-type="bibr" rid="ref10">10</xref>
                </sup> Therefore, this study was aimed to review the role of therapeutic microRNAs in arteriogenesis process of limb ischemia.</p>
        </sec>
        <sec id="sec7" sec-type="methods">
            <title>Methods</title>
            <p>The review protocol was registered with the International Prospective Register of Systematic Reviews (PROSPERO) database (registration number: CRD42024484988), however the protocol has yet to be published. We performed this systematic review according to the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) statement.</p>
            <sec id="sec8">
                <title>Search strategy</title>
                <p>We searched for basic and clinical studies published in the PubMed, Scopus, and ScienceDirect databases on July 25, 2021. The literature is limited to English. We use the PICO strategy to answer this research question. The following terms were used for the literature search: (peripheral arterial disease OR peripheral artery disease OR chronic limb threatening Ischemia OR critical limb ischemia OR hindlimb Ischemia OR hind-limb ischemia OR femoral artery ligation OR hindlimb) AND (microRNA OR microRNAs OR miRNAs OR &#x201c;micro RNA&#x201d; OR miRNA OR &#x201c;micro RNAs&#x201d;) AND (angiogenesis OR arteriogenesis OR neovascularization OR collateral).</p>
            </sec>
            <sec id="sec9">
                <title>Eligibility criteria</title>
                <p>Two authors (MT and DA) independently assessed the eligibility of the studies. The inclusion criteria were as follows: 1) Explaining the role of miRNAs in the arteriogenesis process of limb ischemia, either in vivo or clinical studies; 2) if in vivo study, inducing limb ischemia in animal models must be clearly described; 3) articles published in full-text journals; 4) Articles in English; and 5) articles assessing arteriogenesis using imaging or staining methods. The exclusion criteria were as follows: 1) the study involved only an in vitro study, 2) there was no control group in an in vivo study, and 3) the study was not conducted as primary research.</p>
            </sec>
            <sec id="sec10">
                <title>Data extraction</title>
                <p>Two authors independently extracted the data from the included studies (MT and DA). The extracted data included the author&#x2019;s name, publication year, animal models (type of animal, strain, age, how to induce limb ischemia, concomitant conditions, and if any animal gender was also included), type of microRNA, administration method in intervention and control groups, and techniques for evaluating arteriogenesis, including time points of assessment and outcomes. Any disagreements between the authors were resolved through discussion. Owing to the high heterogeneity of the included studies, a meta-analysis could not be conducted. We developed &#x2018;Characteristics of study&#x2019; tables to summarize and compare the data above.</p>
            </sec>
            <sec id="sec11">
                <title>Risk of bias assessment</title>
                <p>The risk of bias was evaluated by two authors (MT and DA) using the SYRCLE&#x2019;s risk of bias tool for animal studies. Disagreements were resolved through discussion.</p>
            </sec>
        </sec>
        <sec id="sec12" sec-type="results">
            <title>Results</title>
            <sec id="sec13">
                <title>Search results</title>
                <p>A systematic search of several databases identified 1317 relevant papers for this study (PRISMA Flowchart for The Systematic Review).
                    <sup>
                        <xref ref-type="bibr" rid="ref59">59</xref>
                    </sup> A total of 130 articles remained after removing duplicate publications and screening titles and abstracts. Furthermore, 3 articles with no full text available and 91 studies were not included because there was no analysis of miRNA in arteriogenesis. Therefore, 36 articles with 28 types of miRNAs were eligible for further analysis in this systematic review. The selected articles showed substantial heterogeneity, including animal models, intervention approaches, control groups, timing of administration, and methodology used to assess arteriogenesis.</p>
            </sec>
            <sec id="sec14">
                <title>Study characteristics</title>
                <p>All the selected studies in Characteristics of Study (
                    <xref ref-type="table" rid="T1">Table 1</xref>)
                    <sup>
                        <xref ref-type="bibr" rid="ref59">59</xref>
                    </sup> show that strain, animal models, concomitant conditions, and techniques used to induce limb ischemia varied among studies. Almost all of the studies (n=35, 97,2%) used a rodent as a model, of which 33 studies used mice and 2 studies used rats. BALB/c and C57Bl/6 were the most commonly used mouse strains. The two strains used in this study were Fischer and Adult Sprague-Dawley rats. Furthermore, only one study used New Zealand White rabbits. Regarding concomitant conditions, diabetic mice were used in five studies and immunocompromised mice were used in two studies, 2 studies used hypercholesterolemic mice model, and 1 study used aging mice. Three studies used genetically modified mice compared to wild-type mice to determine the effect of a specific type of microRNA on arteriogenesis. Moreover, the techniques used to create hindlimb ischemia vary widely varied.
                    <sup>
                        <xref ref-type="bibr" rid="ref59">59</xref>
                    </sup>
                </p>
                <table-wrap id="T1" orientation="portrait" position="float">
                    <label>Table 1. </label>
                    <caption>
                        <title>MicroRNAs involved in arteriogenesis.</title>
                    </caption>
                    <table content-type="article-table" frame="hsides">
                        <thead>
                            <tr>
                                <th align="left" colspan="1" rowspan="1" valign="top">MiRNA</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Expression (Therapeutic Purpose)</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Details</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Target</th>
                            </tr>
                        </thead>
                        <tbody>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">let-7g</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2191;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <p>
                                        <list list-type="bullet">
                                            <list-item>
                                                <label>&#x2022;</label>
                                                <p>let-7g enhanced expression of VEGF-A and VEGFR-2 through targeting HIF-3&#x03b1; and TP53. Moreover, let-7g influenced the splicing factor SC35, which consequently increased the alternative splicing of VEGF-A, from VEGF-A
                                                    <sub>165b</sub> (anti-angiogenic isoform) to VEGF-A
                                                    <sub>164a</sub> (pro-angiogenic isoform).
                                                    <sup>
                                                        <xref ref-type="bibr" rid="ref11">11</xref>
                                                    </sup>
                                                </p>
                                            </list-item>
                                        </list>
                                    </p>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">HIF-3&#x03b1; and TP53.</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">15a/16</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2193;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <p>
                                        <list list-type="bullet">
                                            <list-item>
                                                <label>&#x2022;</label>
                                                <p>Inhibition of miR-15a/16 enhanced arteriogenesis and angiogenesis in a mouse model of limb ischemia.
                                                    <sup>
                                                        <xref ref-type="bibr" rid="ref12">12</xref>
                                                    </sup>
                                                </p>
                                            </list-item>
                                            <list-item>
                                                <label>&#x2022;</label>
                                                <p>Overexpression of miR-15a or-16 decreased Tie2 at the protein level.
                                                    <sup>
                                                        <xref ref-type="bibr" rid="ref13">13</xref>
                                                    </sup>
                                                </p>
                                            </list-item>
                                        </list>
                                    </p>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <p>
                                        <list list-type="bullet">
                                            <list-item>
                                                <label>&#x2022;</label>
                                                <p>VEGF-A and AKT3</p>
                                            </list-item>
                                            <list-item>
                                                <label>&#x2022;</label>
                                                <p>Tie2</p>
                                            </list-item>
                                        </list>
                                    </p>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">14q32 microRNA gene cluster</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2193;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <p>
                                        <list list-type="bullet">
                                            <list-item>
                                                <label>&#x2022;</label>
                                                <p>Inhibition of miR-329, miR-487b, miR-494, and miR-495 led to arteriogenesis and angiogenesis.
                                                    <sup>
                                                        <xref ref-type="bibr" rid="ref10">10</xref>
                                                    </sup>
                                                </p>
                                            </list-item>
                                        </list>
                                    </p>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">15b/5p</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2193;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <p>
                                        <list list-type="bullet">
                                            <list-item>
                                                <label>&#x2022;</label>
                                                <p>Regulating arteriogenesis and angiogenesis via targeting AKT3/eNOS pathway.
                                                    <sup>
                                                        <xref ref-type="bibr" rid="ref14">14</xref>
                                                    </sup>
                                                </p>
                                            </list-item>
                                        </list>
                                    </p>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">AKT3</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">21</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2191;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <p>
                                        <list list-type="bullet">
                                            <list-item>
                                                <label>&#x2022;</label>
                                                <p>Human umbilical cord blood-derived mesenchymal stem cells (UCBMSCs) contained miR-21 which repaired neovascularization by increasing the activity of HIF-1&#x03b1; by targeting CHIP.
                                                    <sup>
                                                        <xref ref-type="bibr" rid="ref15">15</xref>
                                                    </sup>
                                                </p>
                                            </list-item>
                                        </list>
                                    </p>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">CHIP</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">29a</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2193;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <p>
                                        <list list-type="bullet">
                                            <list-item>
                                                <label>&#x2022;</label>
                                                <p>Downregulation of MiR29a and upregulation of ADAM12 in ischemia with hyperglycemia state was impaired. Knocking down miR29a was adequate for fixing ADAM12 upregulation in ischemia with a hyperglycemia state. Hence, improving perfusion and angiogenesis even when vascular endothelial growth factor signaling was impaired.
                                                    <sup>
                                                        <xref ref-type="bibr" rid="ref16">16</xref>
                                                    </sup>
                                                </p>
                                            </list-item>
                                        </list>
                                    </p>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">ADAM12</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">92a</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2193;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <p>
                                        <list list-type="bullet">
                                            <list-item>
                                                <label>&#x2022;</label>
                                                <p>Inhibition of miR-92a contributed to enhancing angiogenesis and arteriogenesis.
                                                    <sup>
                                                        <xref ref-type="bibr" rid="ref17">17</xref>
                                                    </sup>
                                                </p>
                                            </list-item>
                                        </list>
                                    </p>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">mRNA encoding integrin subunit alpha5</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">93</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2191;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <p>
                                        <list list-type="bullet">
                                            <list-item>
                                                <label>&#x2022;</label>
                                                <p>miR-93 impeded interferon regulatory factor-9 to reduce the production of IRG1&#x2013;itaconic acid, therefore it stimulated M2-like polarization in ischemic muscle. Consequently, it increased angiogenesis, arteriogenesis, and blood perfusion.
                                                    <sup>
                                                        <xref ref-type="bibr" rid="ref18">18</xref>
                                                    </sup> Another study showed that curcumin improved angiogenesis and arteriogenesis by promoting the expression of miR-93.
                                                    <sup>
                                                        <xref ref-type="bibr" rid="ref19">19</xref>
                                                    </sup>
                                                </p>
                                            </list-item>
                                            <list-item>
                                                <label>&#x2022;</label>
                                                <p>miR-93 increased arteriogenesis and angiogenesis by regulating the expression of multiple genes that coordinated the pathway of apoptosis and cell proliferation.
                                                    <sup>
                                                        <xref ref-type="bibr" rid="ref20">20</xref>
                                                    </sup>
                                                </p>
                                            </list-item>
                                            <list-item>
                                                <label>&#x2022;</label>
                                                <p>miR-93 inhibited CDKN1A expression at the mRNA and protein expression levels. Hence, promoting arteriogenesis and angiogenesis.
                                                    <sup>
                                                        <xref ref-type="bibr" rid="ref21">21</xref>
                                                    </sup>
                                                </p>
                                            </list-item>
                                        </list>
                                    </p>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <p>
                                        <list list-type="bullet">
                                            <list-item>
                                                <label>&#x2022;</label>
                                                <p>interferon regulatory factor-9 (IRF9) multiple genes</p>
                                            </list-item>
                                            <list-item>
                                                <label>&#x2022;</label>
                                                <p>Cyclin dependent kinase inhibitor 1A (CDKN1A) gene</p>
                                            </list-item>
                                        </list>
                                    </p>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">100</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2193;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">mTOR expression was down-regulated in endothelial cells and vascular smooth muscle cells by overexpression of miR-100, hence it decreased cellular proliferation.
                                    <sup>
                                        <xref ref-type="bibr" rid="ref22">22</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">mTOR</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">124-3p</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2193;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Overexpression of miR-124-3p reduced STAT3 protein expression levels. Hence, mir 124-3p impaired perfusion and angiogenesis.
                                    <sup>
                                        <xref ref-type="bibr" rid="ref23">23</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">STAT3</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">126</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2191;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <p>
                                        <list list-type="bullet">
                                            <list-item>
                                                <label>&#x2022;</label>
                                                <p>CD34Exo contained high level of miR-126-3p which enhanced arteriogenesis and angiogenesis by suppressing the expression of SPRED1. Hence, modulating severals genes expression (VEGF, angiopoietin 1, angiopoietin 2, MMP9, thrombospondin 1, etc).
                                                    <sup>
                                                        <xref ref-type="bibr" rid="ref24">24</xref>
                                                    </sup>
                                                </p>
                                            </list-item>
                                            <list-item>
                                                <label>&#x2022;</label>
                                                <p>The sustained release of miR-126 loaded with poly lactic-co-glycolic acid (PLGA) nanoparticles (NPs) enhanced perfusion and angiogenesis by suppressing the expression of SPRED1.
                                                    <sup>
                                                        <xref ref-type="bibr" rid="ref25">25</xref>
                                                    </sup> Another study showed that miR-126 loaded with Bubble liposomes had the same result.
                                                    <sup>
                                                        <xref ref-type="bibr" rid="ref26">26</xref>
                                                    </sup>
                                                </p>
                                            </list-item>
                                            <list-item>
                                                <label>&#x2022;</label>
                                                <p>Adipose-Derived Stem Cell Therapeutic Factor Concentrate had a high level of miR-126, which increased perfusion and angiogenesis.
                                                    <sup>
                                                        <xref ref-type="bibr" rid="ref27">27</xref>
                                                    </sup>
                                                </p>
                                            </list-item>
                                            <list-item>
                                                <label>&#x2022;</label>
                                                <p>MiR-126-3p repaired perfusion and angiogenesis by suppressing the expression of SPRED1 and PIK3R2.
                                                    <sup>
                                                        <xref ref-type="bibr" rid="ref28">28</xref>
                                                    </sup>
                                                </p>
                                            </list-item>
                                        </list>
                                    </p>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">SPRED1, PIK3R2</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">130a</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2191;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Overexpression of miR-130a decreased the expression of MEOX2 and HOXA5 (antiangiogenic genes). Those genes were up-regulated in ischemic muscles of aging mice. Hence, miR-130a improved perfusion and angiogenesis in ischemia related to aging.
                                    <sup>
                                        <xref ref-type="bibr" rid="ref29">29</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">MEOX2 and HOXA5</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">132/212</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2191;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">MiR-132/212 enhanced the Ras-Mitogen-activated protein kinase MAPK signaling pathway through direct inhibition of Rasa1 and Spred1. The miR-132/212 cluster could enhance arteriogenesis by regulating the Ras-MAPK signaling pathway via direct targeting of the inhibitors Rasa1 and Spred1.
                                    <sup>
                                        <xref ref-type="bibr" rid="ref30">30</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">RASA1, SPRY1, SPRED1</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">133a</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2193;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">In models of occlusive artery disease with diabetes, overexpression of miR-133a inhibited NO- CGMP angiogenic pathway via targeting GCH1.
                                    <sup>
                                        <xref ref-type="bibr" rid="ref31">31</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">GCH1</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">139-5p</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2193;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">The diabetic condition led to overexpression of miR-139-5p in endothelial cells, thereby it inhibited the c-jun pathway and downregulated the expression of VEGF and PDGF-&#x03b2;. Hence, contributing in the reduction of ECFC migration, proliferation, and tube formation, which consequently diminished endothelial cell survival.
                                    <sup>
                                        <xref ref-type="bibr" rid="ref32">32</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">c-jun pathway</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">143-3p</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2191;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">In vivo study showed that increased expression of microRNA 143-3p in response to fluid shear stress could play a role in the reorganization of the extracellular matrix which was important in the process of vascular remodeling through inhibition of V-&#x00e1;2 collagen biosynthesis.
                                    <sup>
                                        <xref ref-type="bibr" rid="ref33">33</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">V-&#x00e1;2 collagen</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">146b</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2191;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">miR-146b promoted angiogenesis and arteriogenesis through targets TRAF6 and impeded oxLDL-induced TRAF6-TNFa inflammatory pathway. Therefore, decreased miR-146b expression led to impair arteriogenesis and angiogenesis in hypercholesterolemic conditions.
                                    <sup>
                                        <xref ref-type="bibr" rid="ref34">34</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">TRAF6</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">146a</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2193;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Anti microRNA 146a in vivo with femoral artery ligation model showed a 22% increase in collateral artery diameter compared to controls. However, there was no beneficial effect in the process of angiogenesis or muscle regeneration. These effects occurred by upregulation of pro-inflammatory (i.e., NF&#x03ba;B) endothelial cell activation. In addition, arteriogenesis was also possibly mediated 
                                    <italic toggle="yes">via</italic> pericollateral Ly6C
                                    <sup>hi</sup> monocyte proliferation and/or migration.
                                    <sup>
                                        <xref ref-type="bibr" rid="ref35">35</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">NF&#x03ba;B</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">150</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2191;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Hypercholesterolemia and exposure to oxidized LDL were associated with increased expression of SRC kinase signaling inhibitor 1 and decreased Src activity. MiR-150 mimics could reduce the expression of SRC kinase signaling inhibitor 1 and restored Src activity and Akt (protein kinase B) activity. Hypercholesterolemia was associated with decreased miR-150 expression, impaired Src signaling pathway, and inefficient neovascularization in response to ischemia. Administration of miR-150 using miR mimics might be a new therapeutic strategy to enhance ischemia-induced neovascularization in atherosclerotic conditions.
                                    <sup>
                                        <xref ref-type="bibr" rid="ref36">36</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">SRCIN-1</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">155</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2191;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">MicroRNA 155 had the opposite effect as proarteriogenic and antiangiogenic. Its expression in endothelial cells and bone marrow&#x2013;derived cells was important for arteriogenesis in response to ischemia. MiRNA-155 directly suppressed SOCS1 in monocytes or macrophages, which was a negative feedback regulator of JAK-STAT signaling. Hence, miRNA-155 enhanced monocyte/macrophage rolling, adhesion, migration, and the production of pro-arteriogenic cytokine.
                                    <sup>
                                        <xref ref-type="bibr" rid="ref37">37</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">SOCS1</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">199a-5p</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2193;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">miR-199a-5p suppressed gene expression of pro-arteriogenic (IKKb, Cav1) and inhibited pericollateral macrophage recruitment. In addition, overexpression of miR-199a reduced collateral artery growth by &#x00b1;25% (&#x00b1;2.4-fold decrease in conductance) and inhibition of miR-199a increased arteriogenesis by 36% (&gt;3.4-fold conductance increase).
                                    <sup>
                                        <xref ref-type="bibr" rid="ref38">38</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">IKKb, Cav1</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">210</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2191;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">miR-210 diminished ROS in endothelial cells and ischemic muscle tissue through downregulated P4HB protein levels in EC under a hypoxic environment.
                                    <sup>
                                        <xref ref-type="bibr" rid="ref39">39</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">P4HB</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">223</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2193;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">miR-223 deterred endothelial cell proliferation by targeting &#x03b2;1 integrin.
                                    <sup>
                                        <xref ref-type="bibr" rid="ref40">40</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x03b2;1 integrin</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">352</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2193;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Anti miR-352 increased the expression of insulin-like growth factor II receptor (IGF2R), which may contribute in the complex pathway for arterial growth. Furthermore, infusion of antagomir miR-352 could enhance collateral vessel growth.
                                    <sup>
                                        <xref ref-type="bibr" rid="ref41">41</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">IGF2R</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">503</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2193;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Inhibition of miR-503 in ischemic adductor muscle ameliorated post-ischemic blood flow restoration in a mouse model which involved the CDC25A target.
                                    <sup>
                                        <xref ref-type="bibr" rid="ref42">42</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">CDC25A</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">615-5p</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2193;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">miR-615-5p impeded the VEGF-AKT/eNOS signaling pathway in endothelial cells by directly reduced the level of Ras-associating domain family member 2 (RASSF2) and insulin-like growth factor 2 (IGF2).
                                    <sup>
                                        <xref ref-type="bibr" rid="ref43">43</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <italic toggle="yes">RASSF-2</italic> dan IGF-2</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">675</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2191;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Incorporating miR-675 into exosomes encapsulated in silk fibroin hydrogel promoted blood perfusion by inhibiting the TGF-&#x03b2;1/p21 signaling pathway.
                                    <sup>
                                        <xref ref-type="bibr" rid="ref44">44</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">TGF-&#x03b2;1/p21 pathway</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">939-5p</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&#x2193;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">miR-939-5p in exosomes from patients with myocardial ischemia (isc-Exo) inhibited the expression and activity of iNOS, therefore it reduced NO production in endothel. Consequently, it impaired angiogenesis and arteriogenesis.
                                    <sup>
                                        <xref ref-type="bibr" rid="ref45">45</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">iNOS</td>
                            </tr>
                        </tbody>
                    </table>
                </table-wrap>
                <p>The therapeutic and timing of administration varied among the included studies. Intramuscular injection was the most commonly used (n=21), followed by tail vein (n=5), intra-arterial (n=2), oral (n=1), retro-orbital (n=1), and not clearly explained (n=1). Meanwhile, there were 3 studies that did not use therapeutic agents (owing to genetic modification). Regarding the timing of administration, 11 studies performed repeated administration at different time points: 10 studies administered agent immediately after ligation, 2 studies administered drug one day before ligation, one study delivered agent 30 min before ligation, one study administered agent on day 1 after ligation, one study gave agent on day 7 after ligation. Unfortunately, 7 studies did not clearly state when the agent was administered.</p>
                <p>The methods used to evaluate arteriogenesis also varied among the included studies. Imaging techniques were the most commonly used among the studies, from which 31 studies used laser Doppler perfusion imaging, one study used high-resolution laser color Doppler imaging, one study used laser speckle perfusion imaging, one study used contrast-enhanced ultrasound (CEU), one study used periCam perfusion speckle imager, two studies used whole-mount vascular casting, one study used postmortem vascular casting, and one study used postmortem angiogram. Staining methods were also used, and &#x03b1;-smooth muscle actin (&#x03b1;-SMA) staining was the most commonly used method, either by immunohistochemistry or immunofluorescence (n=12). Some of the techniques were combined, of which the most common combination was laser Doppler perfusion imaging and &#x03b1;-smooth muscle actin (&#x03b1;-SMA) staining (n=11). The duration of outcome observation varied among the studies from 7 days to 48 days. The observation time points varied during the observation period.</p>
                <p>
                    <xref ref-type="table" rid="T1">Table 1</xref> shows that, depending on the specific type of miRNA, some miRNAs need to be upregulated or downregulated to enhance arteriogenesis and vice versa. Some of microRNAs need to be upregulated, namely, miRNA-126-3p, -93, -675, -143-3p, -130a, -210, -146b, -21, -let-7g, -132/212, -150, and 155. In contrast, several microRNAs needed to be downregulated, namely: miRNA-939-5p, -503, -199a-5p, -146a, -92a, -14q32 microRNA gene cluster, -15a/16, -100, -133a, -139-5p, -223, -352, -615-5p, -15b/5p, -124-3p, and 29a. Several microRNAs were loaded when administered to hindlimb ischemia models, namely microRNA-126 was naturally contained in CD34Exo and adipose-derived stem cell therapeutic factor concentrate. MicroRNA-939-5p was abundant in exosomes from patients with myocardial ischemia (isc-Exo). Furthermore, microRNA-21 is abundant in umbilical cord blood-derived mesenchymal stem cells (UCBMSCs). Finally, curcumin contained a high level of microRNA-93. 
                    <xref ref-type="table" rid="T1">Table 1</xref> also shows that miR-126 and miR-93 are the most commonly assessed miRNAs in hindlimb ischemia. Regarding the therapeutic target of microRNAs, SPRED1 was the most common, namely miR-126 and -132/212.</p>
            </sec>
            <sec id="sec15">
                <title>Risk of bias assessment</title>
                <p>SYRCLE&#x2019;s risk of bias tool for animal studies was used to assess the risk of bias, and the outcomes are shown in Risk of Bias Assessment.
                    <sup>
                        <xref ref-type="bibr" rid="ref59">59</xref>
                    </sup> In most studies, the risk of bias fell into two categories: &#x201c;unclear&#x201d; or &#x201c;high.&#x201d; In particular, the majority of studies did not specify the adequacy of the generation and application of the allocation sequence, the concealment of allocation to different groups during the experiment, or the random housing or selection of animals for outcome assessment, whether investigators were blinded to the interventions received by each animal, or whether the outcome assessor was blinded.</p>
            </sec>
        </sec>
        <sec id="sec16" sec-type="discussion">
            <title>Discussion</title>
            <p>This study aimed to systematically search and review the literature on the therapeutic potential of microRNAs in limb ischemia. To date, only in vivo studies have evaluated the potential role of miRNAs in arteriogenesis. Depending on the specific type, the expression could lead to enhanced or decreased arteriogenesis. The following miRNAs were upregulated to enhance arteriogenesis: miRNA-126-3p, -93, -675, -143-3p, -130a, -210, -146b, -21, -let-7g, -132/212, -150, and 155. Meanwhile, microRNAs needed to be downregulated, namely: miRNA-939-5p, -503, -199a-5p, -146a, -92a, -14q32 microRNA gene cluster, -15a/16, -100, -133a, -139-5p, -223, -352, -615-5p, -15b/5p, -124-3p, and 29a. These miRNAs have different target sites in arteriogenesis, with miRNA-126 being the most studied (
                <xref ref-type="fig" rid="f1">Figure 1</xref>). The high heterogeneity among selected studies in terms of microRNA used, techniques for inducing limb ischemia, administration methods in intervention and control groups, and techniques for evaluating arteriogenesis as well as time-points of outcome assessment, hindered the performance of a meta-analysis.</p>
            <fig fig-type="figure" id="f1" orientation="portrait" position="float">
                <label>Figure 1. </label>
                <caption>
                    <title>Proposed mechanism of several microRNAs in arteriogenesis process.</title>
                </caption>
                <graphic id="gr1" orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/161682/e372b81f-5b99-4dda-8a32-c5379859c9c2_figure1.gif"/>
            </fig>
            <p>In this study, mice were the most commonly used limb ischemia models because of their practical aspects and their similarity to humans in terms of neovascularization patterns and genetic aspect.
                <sup>
                    <xref ref-type="bibr" rid="ref46">46</xref>
                </sup>
                <sup>&#x2013;</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref48">48</xref>
                </sup> Moreover the availability of several transgenic mice might be the reason for preferring the use of mice, as shown in these studies. Unfortunately, only two studies were performed in immunocompromised mice, since miRNAs might stimulate immune responses, including macrophages and T cells, and thus might affect the outcome of arteriogenesis.
                <sup>
                    <xref ref-type="bibr" rid="ref46">46</xref>
                </sup>
                <sup>,</sup>
                <sup>
                    <xref ref-type="bibr" rid="ref49">49</xref>
                </sup> The technical approach for inducing limb ischemia was also widely varied in this study, which might affect the arteriogenesis outcome. Double ligation of the iliac and femoral arteries causes severe ischemia rather than single ligation. Moreover, the ligation approach is better than electrocoagulation since recoil will not occur.
                <sup>
                    <xref ref-type="bibr" rid="ref46">46</xref>
                </sup> Concurrent ligation and excision methods will increase the severity level of ischemia.
                <sup>
                    <xref ref-type="bibr" rid="ref50">50</xref>
                </sup> Regarding to sex animal models, most of the selected studies used male due to hinder the effects of estrogen on vascular regrowth.
                <sup>
                    <xref ref-type="bibr" rid="ref51">51</xref>
                </sup> Unfortunately, several studies did not clearly declare animal sex, and two studies in rabbits and mice used female sex.</p>
            <p>Imaging techniques can assess arteriogenesis anatomically or functionally.
                <sup>
                    <xref ref-type="bibr" rid="ref52">52</xref>
                </sup> In this study, most studies used a functional approach such as laser doppler perfusion imaging which assesses restoration of tissue perfusion, equivalent to the sign of effective arteriogenesis.
                <sup>
                    <xref ref-type="bibr" rid="ref52">52</xref>
                </sup> The anatomical approaches used in this study were whole mount vascular casting, postmortem vascular casting, and postmortem angiogram. A combination of anatomical and functional approaches can provide more insight into both the visual and quantitative extent of circulation formation and its functional effectiveness.
                <sup>
                    <xref ref-type="bibr" rid="ref52">52</xref>
                </sup> In this study, miR-199a-5p and miR-146 were assessed using both methods. In addition to imaging methods, histological staining has also been used to assess arteriogenesis.
                <sup>
                    <xref ref-type="bibr" rid="ref53">53</xref>
                </sup> Unfortunately, none of these studies used a combination of anatomical, functional imaging, and histological staining. Such a combination may yield more reliable results.</p>
            <p>In general, the arteriogenesis process requires endothelial and smooth muscle cell proliferation, in which growth factor is crucial to proliferate smooth muscle cells. In the later process, adventitia remodeling through activation and proliferation of fibroblast caused enlargement of lumen vessels.
                <sup>
                    <xref ref-type="bibr" rid="ref9">9</xref>
                </sup> Nevertheless, the exact molecular mechanisms involved in all multifactorial arteriogenesis process is still not fully understood.
                <sup>
                    <xref ref-type="bibr" rid="ref54">54</xref>
                </sup> However, recent evidence showed that microRNA is involved in signaling pathways related to arteriogenesis.
                <sup>
                    <xref ref-type="bibr" rid="ref8">8</xref>
                </sup> As shown in this study, microRNAs affect several pathways related to arteriogenesis, such as Ras-MAPK, TGF-&#x03b2;1/p21, AKT3/eNOS, and JAK-STAT signaling pathway. 
                <xref ref-type="table" rid="T1">Table 1</xref> also shows that miRNAs can lead to arteriogenesis by directly targeting several genes and proteins.</p>
            <p>VEGF-A is essential for endothelial proliferation by binding to VEGFR-2 to stimulate intracellular signaling process.
                <sup>
                    <xref ref-type="bibr" rid="ref55">55</xref>
                </sup> That evidence is supported in this study, in which promoting mir126 and letting 7 g as well as inhibiting mir 15a/16 activate VEGF, leading to arteriogenesis. Another study showed that an increase in miR-139-5p expression in diabetic mice led to downregulation of VEGF, consequently decreasing arteriogenesis. Moreover, miR-223, 100, and 93 also affect cell proliferation by binding to their respective targets, ultimately affecting arteriogenesis.</p>
            <p>Macrophage recruitment is essential for arteriogenesis. Activated macrophages produce TNF-&#x03b1;, growth factor, and chemokines and recruit more monocytes, thereby promoting arteriogenesis.
                <sup>
                    <xref ref-type="bibr" rid="ref9">9</xref>
                </sup> Those results were supported by the results of the present study, in which miRNAs 199a-5p, 146a, and 155 had a role in macrophage recruitment. Moreover, macrophage polarization to an anti-inflammatory macrophage type 2 in ischemic muscle, shown by miR-93, is essential during post-ischemic vascular injury and repair, since M2 macrophages are pro-angiogenic.
                <sup>
                    <xref ref-type="bibr" rid="ref56">56</xref>
                </sup>
            </p>
            <p>In this study, the delivery approach varied; however, most of them used intramuscular injections. However, all delivery approaches, including tail vein, intravenous injection, oral, retro-orbital, and intra-arterial, showed positive results related to arteriogenesis. These results suggested that miRNAs have systemic effects. Depending on the specific type of microRNA, all studies that used concomitant conditions such as diabetic and hypercholesterolemic mice showed positive results in arteriogenesis. These results might suitably explain the use of microRNAs in humans, since CLTI is strongly associated with cardiovascular risk factors, such as diabetes mellitus and dyslipidemia.
                <sup>
                    <xref ref-type="bibr" rid="ref57">57</xref>
                </sup> Aging mice might also be analogous to patients with CLTI due to the increasing number of CLTI in the older population.
                <sup>
                    <xref ref-type="bibr" rid="ref58">58</xref>
                </sup>
            </p>
            <p>The application of SYRCLE&#x2019;s risk of bias tool to assess animal studies revealed a prevalent &#x201c;unclear&#x201d; or &#x201c;high&#x201d; risk of bias across the majority of cases. These studies exhibited deficiencies in essential aspects, such as the generation and application of allocation sequences, allocation concealment, randomization of housing, selection for outcome assessment, and blinding of investigators and outcome assessors. Therefore, these results should be cautiously interpreted.</p>
            <p>Our systematic review had several limitations. First, we reviewed only studies published in English. Second, all research conducted in animal models had high heterogeneity related to inducing hindlimb ischemia, intervention, and outcome assessment methods. Therefore, clinical studies in humans are required to verify the effect of miRNA modulation using mimic and/or inhibitor miRNAs in patients with chronic limb-threatening ischemia.</p>
        </sec>
        <sec id="sec17" sec-type="conclusion">
            <title>Conclusion</title>
            <p>Taken together, our review identifies several miRNAs in preclinical models that show potential for therapeutic purposes to enhance arteriogenesis in patients with chronic limb-threatening ischemia. Hence, a study involving patients with chronic limb-threatening ischemia is required.</p>
        </sec>
    </body>
    <back>
        <sec id="sec20" sec-type="data-availability">
            <title>Data availability</title>
            <sec id="sec21">
                <title>Underlying data</title>
                <p>All data underlying the results are available as part of the article and no additional source data are required.</p>
            </sec>
            <sec id="sec22">
                <title>Extended data</title>
                <p>Figshare: The Role of Therapeutic MicroRNA in Arteriogenesis Process in Limb Ischemia: A Systematic Review. DOI: 
                    <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.6084/m9.figshare.25036163.v3">https://doi.org/10.6084/m9.figshare.25036163.v3</ext-link>.
                    <sup>

                        <xref ref-type="bibr" rid="ref59">59</xref>
</sup>
                </p>
                <p>This project contains the following extended data:
                    <list list-type="bullet">
                        <list-item>
                            <label>&#x2022;</label>
                            <p>PRISMA Flowchart for The Systematic Review</p>
                        </list-item>
                        <list-item>
                            <label>&#x2022;</label>
                            <p>
Table 1. Characteristics of Study</p>
                        </list-item>
                        <list-item>
                            <label>&#x2022;</label>
                            <p>Risk of Bias Assessment</p>
                        </list-item>
                        <list-item>
                            <label>&#x2022;</label>
                            <p>Completed PRISMA checklist</p>
                        </list-item>
                    </list>
                </p>
                <p>Data are available under the terms of the 
                    <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/publicdomain/zero/1.0/">Creative Commons Zero</ext-link> CC0.</p>
            </sec>
        </sec>
        <ack>
            <title>Acknowledgements</title>
            <p>We thank Hariadi, Yohanes William, Tinanda Tarigan, Afif Ramadhan, and Jessica Eve from Department of Cardiology and Vascular Medicine, Faculty of Medicine, Public Health and Nursing Gadjah Mada University, Sleman, Indonesia for their technical support, all of whom approved their inclusion.</p>
        </ack>
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        <front-stub>
            <article-id pub-id-type="doi">10.5256/f1000research.161682.r326630</article-id>
            <title-group>
                <article-title>Reviewer response for version 1</article-title>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author">
                    <name>
                        <surname>Annex</surname>
                        <given-names>Brian H</given-names>
                    </name>
                    <xref ref-type="aff" rid="r326630a1">1</xref>
                    <role>Referee</role>
                    <uri content-type="orcid">https://orcid.org/0000-0001-6538-8243</uri>
                </contrib>
                <aff id="r326630a1">
                    <label>1</label>Medical College of Georgia at Augusta University, Augusta, Georgia, USA</aff>
            </contrib-group>
            <author-notes>
                <fn fn-type="conflict">
                    <p>
                        <bold>Competing interests: </bold>I am founder of start-up company focusing on miR-93 for PAD.&#x00a0; I have founder shares in this start-up company.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>29</day>
                <month>10</month>
                <year>2024</year>
            </pub-date>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2024 Annex BH</copyright-statement>
                <copyright-year>2024</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access peer review report distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <related-article ext-link-type="doi" id="relatedArticleReport326630" related-article-type="peer-reviewed-article" xlink:href="10.12688/f1000research.147482.1"/>
            <custom-meta-group>
                <custom-meta>
                    <meta-name>recommendation</meta-name>
                    <meta-value>approve-with-reservations</meta-value>
                </custom-meta>
            </custom-meta-group>
        </front-stub>
        <body>
            <p>The manuscript by Asmail et al. is a systematic/literature review of micro-RNA reported to be related to peripheral arterial disease.&#x00a0; In general, the limitations of such reviews are well known but the benefits are in providing a single go-to source of information.&#x00a0; Before this reviewer lists a series of relatively minor comments/areas that require clarification, one request for additional (new) data will be listed.</p>
            <p> </p>
            <p> 1) Often in a study that focuses on a microRNA, other microRNAs are also examined.&#x00a0; If a publication focused on miR-A (letter intentionally used to avoid confusion) were other miRs that ultimately ended in this report also studied?&#x00a0; For example, if in the study of miR-A, miR-B and miR-C (where miR-B and miR-C ultimately made this report) were also found to differentially regulated, that would provide a validation.&#x00a0; If several reports of course even better.&#x00a0; It of course could turn out that study of the regulation miR-B in teh report on miR-A could be different.&#x00a0; That would be valuable as well.&#x00a0; Likely, in many, this may not be possible but this could expand the value of the review.</p>
            <p> </p>
            <p> More minor comments:</p>
            <p> 1) Introduction, paragraph 2, last sentence.&#x00a0; Given that no agent has definitely driven angiogiogenesis in CLTI, this sentence may not be completely accurate.&#x00a0; &#x00a0;To make the statement one would need an agent that promoted angiogenesis, not arteriogenesis, and had no therapeuitc effect.</p>
            <p> </p>
            <p> 2) Introduction, paragraph 3, miRs do not signal unless the authors are referring to miR-protein interactions.</p>
            <p> </p>
            <p> 3) Methods, when the two "selectors" disagreed initially on inclusion -- how often was the agreement for and how often against inclusion.</p>
            <p> </p>
            <p> 4) Curcumin was mentioned.&#x00a0; Was this referring to the dietary supplement?&#x00a0; Would a miR be stable through the GI track?</p>
            <p>Are the rationale for, and objectives of, the Systematic Review clearly stated?</p>
            <p>Partly</p>
            <p>Is the statistical analysis and its interpretation appropriate?</p>
            <p>Partly</p>
            <p>If this is a Living Systematic Review, is the &#x2018;living&#x2019; method appropriate and is the search schedule clearly defined and justified? (&#x2018;Living Systematic Review&#x2019; or a variation of this term should be included in the title.)</p>
            <p>No</p>
            <p>Are sufficient details of the methods and analysis provided to allow replication by others?</p>
            <p>Yes</p>
            <p>Are the conclusions drawn adequately supported by the results presented in the review?</p>
            <p>Partly</p>
            <p>Reviewer Expertise:</p>
            <p>Human and experimental peripheral arterial disease including but not limited to non-coding RNAs.</p>
            <p>I confirm that I have read this submission and believe that I have an appropriate level of expertise to confirm that it is of an acceptable scientific standard, however I have significant reservations, as outlined above.</p>
        </body>
        <sub-article article-type="response" id="comment12807-326630">
            <front-stub>
                <contrib-group>
                    <contrib contrib-type="author">
                        <name>
                            <surname>Ismail</surname>
                            <given-names>Muhamad Taufik</given-names>
                        </name>
                        <aff>Cardiology and Vascular, Gadjah Mada University, Yogyakarta, Special Region of Yogyakarta, Indonesia</aff>
                    </contrib>
                </contrib-group>
                <author-notes>
                    <fn fn-type="conflict">
                        <p>
                            <bold>Competing interests: </bold>We confirm that there are no competing interests that could be construed to influence our assessment of the article&#x2019;s or the peer review report&#x2019;s validity or significance.</p>
                    </fn>
                </author-notes>
                <pub-date pub-type="epub">
                    <day>11</day>
                    <month>11</month>
                    <year>2024</year>
                </pub-date>
            </front-stub>
            <body>
                <p>Dear Brian H Annex, thank you for your time and insightful comments. In our study, of the 36 studies reviewed, 35 directly employed specific miRs or agents containing/enriched with/affecting specific miRs, and therefore did not assess other miRs. One study by Li did examine additional miRs using microarray technology; however, only the miRs with a significant role in arteriogenesis were reported. Some studies validate each other due to shared regulatory pathways, such as with miR-93 and miR-126. No studies presented conflicting findings.</p>
                <p> </p>
                <p> Here is the response for addressing minor comments:</p>
                <p> 1. Our aim was to emphasize the general importance of arteriogenesis over angiogenesis in CLTI, as highlighted by Caicedo et al. According to the 2019 ESVS guidelines on CLTI, agents such as stem cells have been shown in clinical trials to enhance angiogenesis, however, they have yet to yield clinical benefits in terms of reducing amputation rates or mortality. This finding underscores the need to prioritize arteriogenesis rather than angiogenesis in this context.</p>
                <p> 2.&#x00a0;We sincerely appreciate your insightful comments and suggestions for revising the paper. We have revised the sentence to clarify the role of miRNAs in influencing signaling pathways rather than directly "signaling." This revision aims to reflect the regulatory role of miRNAs in modulating pathway activity without implying direct signaling.</p>
                <p> 3.&#x00a0;Thank you for your question. In cases where the two reviewers (MT and DA) initially disagreed on inclusion, an additional review by senior reviewers (BY and SM) was conducted to reach a consensus. In 80% of the journals, both reviewers shared the same inclusion criteria, while in 20% of cases, differing opinions required a final decision from the senior reviewers.</p>
                <p> 4.&#x00a0;Based on the article, curcumin is categorized as a dietary supplement because it is a naturally occurring compound derived from turmeric and was administered orally, similar to the typical consumption of dietary supplements. In this study, curcumin is used to investigate its therapeutic effects, showing that while curcumin does not contain miRNAs necessary for arteriogenesis, it modulates the expression of endogenous miRNAs to impact molecular pathways, specifically targeting miRNA pathways within cells. I will incorporate these points in revising the manuscript. It is well-established that many naked miRNAs degrade in the gastrointestinal (GI) tract due to exposure to enzymes, stomach acidity, and intestinal nucleases.</p>
            </body>
        </sub-article>
    </sub-article>
</article>
