<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Publishing DTD v1.2 20190208//EN" "http://jats.nlm.nih.gov/publishing/1.2/JATS-journalpublishing1.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" article-type="research-article" dtd-version="1.2" xml:lang="en">
    <front>
        <journal-meta>
            <journal-id journal-id-type="pmc">F1000Research</journal-id>
            <journal-title-group>
                <journal-title>F1000Research</journal-title>
            </journal-title-group>
            <issn pub-type="epub">2046-1402</issn>
            <publisher>
                <publisher-name>F1000 Research Limited</publisher-name>
                <publisher-loc>London, UK</publisher-loc>
            </publisher>
        </journal-meta>
        <article-meta>
            <article-id pub-id-type="doi">10.12688/f1000research.173562.1</article-id>
            <article-categories>
                <subj-group subj-group-type="heading">
                    <subject>Research Article</subject>
                </subj-group>
                <subj-group>
                    <subject>Articles</subject>
                </subj-group>
            </article-categories>
            <title-group>
                <article-title>A Pilot Investigation of BDNF and GDNF in Chronic Insomnia: Absence of Group Differences and Correlation with Objective Sleep Parameters</article-title>
                <fn-group content-type="pub-status">
                    <fn>
                        <p>[version 1; peer review: awaiting peer review]</p>
                    </fn>
                </fn-group>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Moradi</surname>
                        <given-names>Mohammad-Taher</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Investigation</role>
                    <role content-type="http://credit.niso.org/">Project Administration</role>
                    <role content-type="http://credit.niso.org/">Resources</role>
                    <role content-type="http://credit.niso.org/">Supervision</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <uri content-type="orcid">https://orcid.org/0009-0001-1176-7763</uri>
                    <xref ref-type="aff" rid="a1">1</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Zakiei</surname>
                        <given-names>Ali</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <role content-type="http://credit.niso.org/">Formal Analysis</role>
                    <role content-type="http://credit.niso.org/">Supervision</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <xref ref-type="aff" rid="a2">2</xref>
                </contrib>
                <contrib contrib-type="author" corresp="yes">
                    <name>
                        <surname>Nouraei</surname>
                        <given-names>Sepideh</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <role content-type="http://credit.niso.org/">Investigation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <uri content-type="orcid">https://orcid.org/0009-0001-1176-7763</uri>
                    <xref ref-type="corresp" rid="c1">a</xref>
                    <xref ref-type="aff" rid="a3">3</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Khazaie</surname>
                        <given-names>Habibolah</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Supervision</role>
                    <xref ref-type="aff" rid="a4">4</xref>
                </contrib>
                <aff id="a1">
                    <label>1</label>Sleep Disorders Research Center, Kermanshah University of Medical Sciences, Kermanshah, Kermanshah Province, Iran</aff>
                <aff id="a2">
                    <label>2</label>Sleep Disorders Research Center, Kermanshah University of Medical Sciences, Kermanshah, Kermanshah Province, Iran</aff>
                <aff id="a3">
                    <label>3</label>Sleep Disorders Research Center, Kermanshah University of Medical Sciences, Kermanshah, Kermanshah Province, Iran</aff>
                <aff id="a4">
                    <label>4</label>Sleep Disorders Research Center, Kermanshah University of Medical Sciences, Kermanshah, Kermanshah Province, Iran</aff>
            </contrib-group>
            <author-notes>
                <corresp id="c1">
                    <label>a</label>
                    <email xlink:href="mailto:snouraei96@gmail.com">snouraei96@gmail.com</email>
                </corresp>
                <fn fn-type="conflict">
                    <p>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>12</day>
                <month>12</month>
                <year>2025</year>
            </pub-date>
            <pub-date pub-type="collection">
                <year>2025</year>
            </pub-date>
            <volume>14</volume>
            <elocation-id>1394</elocation-id>
            <history>
                <date date-type="accepted">
                    <day>5</day>
                    <month>12</month>
                    <year>2025</year>
                </date>
            </history>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2025 Moradi MT et al.</copyright-statement>
                <copyright-year>2025</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <self-uri content-type="pdf" xlink:href="https://f1000research.com/articles/14-1394/pdf"/>
            <abstract>
                <sec>
                    <title>Background</title>
                    <p>This study investigated circulating levels of brain-derived neurotrophic factor (BDNF) and glial cell line-derived neurotrophic factor (GDNF), and their association with objective sleep parameters in adults with chronic insomnia compared to normal sleepers.</p>
                </sec>
                <sec>
                    <title>Methods</title>
                    <p>A total of 46 participants were enrolled, including 26 individuals with chronic insomnia and 20 normal sleepers. Serum concentrations of BDNF and GDNF were measured, and sleep architecture was analyzed using overnight polysomnography. Group comparisons were conducted using Mann-Whitney U tests, while Spearman&#x2019;s correlation and multiple regression analyses examined relationships between neurotrophic factors, sleep metrics, and demographic characteristics.</p>
                </sec>
                <sec>
                    <title>Results</title>
                    <p>Participants with insomnia showed significantly impaired objective sleep quality, with lower sleep efficiency (Median: 52.84% vs. 74.65%, p&lt;0.001) and reduced total sleep time (Median: 3.99 h vs. 5.74 h, p&lt;0.001) compared to controls. However, there were no significant differences in circulating BDNF (p=0.610) or GDNF (p=0.249) levels between groups. Correlation analyses across the entire sample revealed no significant associations between either BDNF or GDNF and sleep efficiency (BDNF: &#x03c1; = 0.141, p = 0.215; GDNF: &#x03c1; = 0.086, p = 0.449) or total sleep time. Multiple regression analysis indicated that sleep efficiency independently predicted BDNF levels (p=0.034), though the overall regression model was not significant (F(4,41)=1.309, p=0.283; R
                        <sup>2</sup>=0.113). The GDNF regression model was also non-significant (F(4,41)=1.315, p=0.281; R
                        <sup>2</sup>=0.114). A strong positive correlation was detected between BDNF and GDNF (&#x03c1;=0.835, p&lt;0.001).</p>
                </sec>
                <sec>
                    <title>Conclusions</title>
                    <p>The study verified significant objective sleep impairments in individuals with chronic insomnia but found no differences in BDNF or GDNF levels between groups. While bivariate associations with sleep quality were absent, regression results suggest a complex link between sleep efficiency and BDNF. The limited sample size constrains interpretation, implying that larger studies are needed to validate these preliminary findings and to explore the strong interrelationship between BDNF and GDNF.</p>
                </sec>
            </abstract>
            <kwd-group kwd-group-type="author">
                <kwd>Insomnia</kwd>
                <kwd>GDNF</kwd>
                <kwd>BDNF</kwd>
                <kwd>polysomnography</kwd>
                <kwd>neurotrophic factors</kwd>
                <kwd>Sleep Efficiency</kwd>
            </kwd-group>
            <funding-group>
                <award-group id="fund-1" xlink:href="https://doi.org/10.13039/501100012286">
                    <funding-source>Deputy for Research and Technology, Kermanshah University of Medical Sciences</funding-source>
                    <award-id>4030768</award-id>
                </award-group>
                <funding-statement>This project was financially supported by the Kermanshah University of Medical Sciences (ID: KUMS-4030768).</funding-statement>
                <funding-statement>
                    <italic>The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.</italic>
                </funding-statement>
            </funding-group>
        </article-meta>
    </front>
    <body>
        <sec id="sec5" sec-type="intro">
            <title>1. Introduction</title>
            <p>Insomnia, a sleep disorder marked by difficulty falling or staying asleep, or waking up too early, results in daytime impairment.
                <sup>
                    <xref ref-type="bibr" rid="ref1">1</xref>
                </sup> Chronic insomnia is defined as persistent sleep disturbances occurring at least three nights per week for a minimum of three months.
                <sup>
                    <xref ref-type="bibr" rid="ref2">2</xref>
                </sup> It is often associated with other medical or psychiatric conditions and can impair quality of life, increasing the risk of hypertension, diabetes, and mental health disorders.
                <sup>
                    <xref ref-type="bibr" rid="ref3">3</xref>
                </sup>
            </p>
            <p>Diagnosis and assessment involve tools like the Insomnia Severity Index and the Pittsburgh Sleep Quality Index.
                <sup>
                    <xref ref-type="bibr" rid="ref2">2</xref>
                </sup> Its prevalence varies, with 30% of adults reporting symptoms, 9-15% experiencing daytime consequences, and 6% meeting diagnostic criteria.
                <sup>
                    <xref ref-type="bibr" rid="ref4">4</xref>,
                    <xref ref-type="bibr" rid="ref5">5</xref>
                </sup> Insomnia is more common in women and increases with age.
                <sup>
                    <xref ref-type="bibr" rid="ref5">5</xref>,
                    <xref ref-type="bibr" rid="ref6">6</xref>
                </sup> Risk factors for insomnia include comorbid medical and psychiatric disorders, shift work, and age-related changes.
                <sup>
                    <xref ref-type="bibr" rid="ref5">5</xref>
                </sup> Long-term insomnia is linked to health consequences such as depression, anxiety, cognitive difficulties, and increased risk of cardiovascular disease and diabetes.
                <sup>
                    <xref ref-type="bibr" rid="ref7">7</xref>
                </sup>
            </p>
            <p>Modifiable risk factors-such as difficulty initiating sleep, vulnerability to stress, maladaptive emotional coping, and pre-sleep arousal-are strongly associated with persistent insomnia and the development of anxiety and depressive symptoms.
                <sup>
                    <xref ref-type="bibr" rid="ref8">8</xref>,
                    <xref ref-type="bibr" rid="ref9">9</xref>
                </sup> In older adults, depression, anxiety, and chronic pain disorders further increase the risk.
                <sup>
                    <xref ref-type="bibr" rid="ref10">10</xref>
                </sup> Additional predisposing and precipitating factors include female sex, loss of income, increased anxiety, depression, perceived stress, declining health, and increased pain.
                <sup>
                    <xref ref-type="bibr" rid="ref11">11</xref>
                </sup> Dysfunctional sleep-related beliefs also contribute to clinically significant anxiety and depressive symptoms.
                <sup>
                    <xref ref-type="bibr" rid="ref8">8</xref>
                </sup> Addressing these modifiable factors is important for preventing insomnia onset and chronicity.</p>
            <p>Genetic factors also play a significant role, with twin studies showing a mean heritability of 39%.
                <sup>
                    <xref ref-type="bibr" rid="ref12">12</xref>
                </sup> These genetic factors are linked to pathways such as cellular stress pathways, phototransduction, and muscle development.
                <sup>
                    <xref ref-type="bibr" rid="ref13">13</xref>
                </sup> Insomnia is considered a complex polygenic, stress-related disorder resulting from interactions between genetic and environmental factors,
                <sup>
                    <xref ref-type="bibr" rid="ref14">14</xref>
                </sup> and shares genetic architecture with traits like restless legs syndrome, aging, and various cardiometabolic, behavioral, psychiatric, and reproductive traits.
                <sup>
                    <xref ref-type="bibr" rid="ref15">15</xref>
                </sup> Evidence indicates potential causal links between insomnia and coronary artery disease, depressive symptoms, and subjective well-being.
                <sup>
                    <xref ref-type="bibr" rid="ref13">13</xref>,
                    <xref ref-type="bibr" rid="ref15">15</xref>
                </sup> Epigenetic mechanisms may help explain how gene-environment interactions contribute to the long-term effects of insomnia.
                <sup>
                    <xref ref-type="bibr" rid="ref14">14</xref>
                </sup>
            </p>
            <p>Recent research has explored the potential role of neurotrophic factors, particularly brain-derived neurotrophic factor (BDNF) and glial cell line-derived neurotrophic factor (GDNF), in the pathophysiology of insomnia. BDNF, a key protein supporting neuronal survival, synaptic plasticity, and cognitive function, has been implicated in sleep regulation.
                <sup>
                    <xref ref-type="bibr" rid="ref16">16</xref>
                </sup> Some studies suggest that individuals with insomnia have lower BDNF levels than healthy controls, proposing a model where chronic stress and sleep disruption suppress BDNF expression, potentially creating a vicious cycle.
                <sup>
                    <xref ref-type="bibr" rid="ref17">17</xref>,
                    <xref ref-type="bibr" rid="ref18">18</xref>
                </sup> However, this finding is not universal, and the nature of the relationship remains unclear.</p>
            <p>Similarly, GDNF, which is crucial for neuronal maintenance and protection, has been linked to sleep processes. Altered GDNF levels have been reported in chronic insomnia disorder, with some studies correlating these changes with poor sleep quality and cognitive impairment.
                <sup>
                    <xref ref-type="bibr" rid="ref19">19</xref>,
                    <xref ref-type="bibr" rid="ref20">20</xref>
                </sup> It is hypothesized that GDNF may be involved in the neuroinflammatory response and glial activation associated with chronic sleep loss.
                <sup>
                    <xref ref-type="bibr" rid="ref21">21</xref>
                </sup>
            </p>
            <p>While both BDNF and GDNF are promising candidates, significant research gaps persist. Existing literature is limited by small sample sizes, methodological inconsistencies in biomarker assessment, and a lack of longitudinal data.
                <sup>
                    <xref ref-type="bibr" rid="ref17">17</xref>,
                    <xref ref-type="bibr" rid="ref18">18</xref>
                </sup>
            </p>
            <p>Despite these promising leads, the existing literature is characterized by inconsistent results, often attributed to small sample sizes, methodological variations in biomarker assessment, and a reliance on subjective sleep measures. The fundamental question of whether BDNF and GDNF levels are reliably altered in insomnia and directly associated with objective sleep deficits remains open.</p>
            <p>To address this, the present study was designed to compare circulating BDNF and GDNF levels between well-characterized adults with chronic insomnia and normal sleepers, and to examine their associations with key objective sleep parameters derived from polysomnography. This approach aims to provide a clearer picture of the potential role of these neurotrophic factors in insomnia.</p>
        </sec>
        <sec id="sec6">
            <title>2. Materials and methods</title>
            <sec id="sec7">
                <title>2.1 Study design and participants</title>
                <p>This cross-sectional study enrolled 46 adults, comprising 26 patients with chronic insomnia and 20 healthy normal sleepers. Participants were recruited from the Sleep Disorders Center at Kermanshah University of Medical Sciences. The diagnosis of chronic insomnia was confirmed through clinical assessment and overnight polysomnography (PSG), based on standard criteria requiring symptoms at least three nights per week for a minimum of three months.
                    <sup>
                        <xref ref-type="bibr" rid="ref2">2</xref>
                    </sup> Control participants were asymptomatic, reported no history of sleep disorders, and were group-matched to the insomnia patients by age and sex. Exclusion criteria for both groups included the presence of other primary sleep disorders (e.g., sleep apnea, restless legs syndrome), chronic neurological or psychiatric conditions, active infections, and the use of medications known to influence neurotrophic factor levels (e.g., antidepressants, mood stabilizers). The research and its analysis plan were not pre-registered.</p>
            </sec>
            <sec id="sec8">
                <title>2.2 Polysomnography (PSG) recording and scoring</title>
                <p>All participants underwent a full-night attended polysomnography (PSG) using a SOMNOmedics system (Germany). Recordings were manually scored by a certified sleep technologist and reviewed by a board-certified sleep physician according to the American Academy of Sleep Medicine (AASM) Manual for the Scoring of Sleep and Associated Events (v2.3). Sleep staging (N1, N2, N3, REM) and arousal analysis were performed to derive objective sleep parameters. The primary sleep continuity metrics extracted for this analysis were Total Sleep Time (TST) and Sleep Efficiency (SE). To ensure scoring reliability, a random subset of 10% of the recordings was independently re-scored by a second technician, demonstrating high inter-rater agreement (&#x03ba; = 0.82 for sleep efficiency).</p>
            </sec>
            <sec id="sec9">
                <title>2.3 Serum BDNF and GDNF measurement</title>
                <p>Venous blood samples were collected between 7:00 and 8:00 AM following an overnight fast and the PSG night. Serum was separated by centrifugation (3200 rpm for 10 minutes at 4&#x00b0;C) and aliquoted, and stored at -80&#x00b0;C until assayed. Concentrations of BDNF and GDNF were quantified using commercially available ELISA kits (ZellBio GmbH, Germany; ZB-11302C-H9648 for BDNF and ZB-10122C-H9648 for GDNF). The assays were validated for specificity, with cross-reactivity tests confirming no significant binding to related neurotrophins. Assay performance was robust, with spike-and-recovery rates of 92&#x2013;105% for BDNF and 89&#x2013;102% for GDNF, and intra- and inter-assay coefficients of variation below 8% for both biomarkers.</p>
            </sec>
            <sec id="sec10">
                <title>2.4 Statistical analysis</title>
                <p>Data were analyzed using SPSS software (Version 27.0, IBM Corp., Armonk, NY, USA). Given the non-normal distribution of some variables (assessed by Shapiro-Wilk tests), group comparisons for neurotrophic factors and sleep parameters were conducted using non-parametric Mann-Whitney U tests. Descriptive statistics are presented as Median [Interquartile Range] for these comparisons. Associations between neurotrophic factors (BDNF, GDNF) and sleep parameters (TST, SE) across the entire sample were examined using Spearman&#x2019;s rank-order correlation. Standard multiple regression analyses were performed to assess whether diagnosis, sleep parameters (TST and SE), age, and BMI collectively predicted BDNF and GDNF levels. A p-value of &lt; 0.05 was considered statistically significant. A post-hoc power analysis was conducted using G*Power 3.1
                    <sup>
                        <xref ref-type="bibr" rid="ref22">22</xref>
                    </sup> to determine the statistical power achieved for the group comparisons of BDNF and GDNF. This analysis was based on the observed effect sizes from the Mann-Whitney U tests, with an alpha level of 0.05 and the actual sample sizes of the two groups (insomnia: n = 26, normal sleepers: n = 20).</p>
            </sec>
            <sec id="sec11">
                <title>2.5 Ethics approval and consent to participate</title>
                <p>The study was conducted in accordance with the Declaration of Helsinki and was approved by the Ethics Committee of Kermanshah University of Medical Sciences (IR.KUMS.REC.1403.466). Written informed consent was obtained from all participants prior to their enrollment.</p>
            </sec>
        </sec>
        <sec id="sec12" sec-type="results">
            <title>3. Results</title>
            <sec id="sec13">
                <title>3.1 Participant characteristics</title>
                <p>This study comprised 46 participants, categorized into a chronic insomnia group (n = 26) and a normal sleeper control group (n = 20). Descriptive statistics for the total sample are presented in 
                    <xref ref-type="table" rid="T1">
Table 1</xref>. The cohort had a mean age of 45.39 years (&#x00b1;8.99) and a mean Body Mass Index (BMI) of 27.15 (&#x00b1;4.01). The mean levels of Brain-Derived Neurotrophic Factor (BDNF) and Glial cell line-Derived Neurotrophic Factor (GDNF) were 5865.56 pg/mL (&#x00b1;1855.54) and 7327.82 pg/mL (&#x00b1;2764.80), respectively. Sleep parameters indicated a mean Total Sleep Time (TST) of 4.75 hours (&#x00b1;1.64) and a mean Sleep Efficiency (SE) of 62.32% (&#x00b1;20.31).</p>
                <table-wrap id="T1" orientation="portrait" position="float">
                    <label>
Table 1. </label>
                    <caption>
                        <title>Descriptive statistics for the total sample (N = 46).</title>
                    </caption>
                    <table content-type="article-table" frame="hsides">
                        <thead>
                            <tr>
                                <th align="left" colspan="1" rowspan="1" valign="top">Variable</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Mean</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">
Std. deviation</th>
                            </tr>
                        </thead>
                        <tbody>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">Age (years)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">45.39</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">8.99</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">BMI (kg/m
                                    <sup>2</sup>)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">27.15</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">4.01</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">BDNF (pg/mL)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">5865.56</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1855.54</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">GDNF (pg/mL)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">7327.82</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">2764.80</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">Total Sleep Time (hours)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">4.75</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1.64</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">Sleep Efficiency (%)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">62.32</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">20.31</td>
                            </tr>
                        </tbody>
                    </table>
                </table-wrap>
            </sec>
            <sec id="sec14">
                <title>3.2 Comparison of neurotrophic factors and sleep parameters between groups</title>
                <p>Group comparisons were conducted using non-parametric Mann-Whitney U tests due to indications of non-normality in some variables (as assessed by Shapiro-Wilk tests). The results are summarized in 
                    <xref ref-type="table" rid="T2">
Table 2</xref>.</p>
                <table-wrap id="T2" orientation="portrait" position="float">
                    <label>
Table 2. </label>
                    <caption>
                        <title>Group comparisons between chronic insomnia and normal sleepers.</title>
                    </caption>
                    <table content-type="article-table" frame="hsides">
                        <thead>
                            <tr>
                                <th align="left" colspan="1" rowspan="1" valign="top">Variable</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Insomnia (n = 26) Median [IQR]</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Normal Sleepers (n = 20) Median [IQR]</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Mann-Whitney U</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">
p-value
</th>
                            </tr>
                        </thead>
                        <tbody>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <bold>Neurotrophic Factors</bold>
</td>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <bold>BDNF (pg/mL)</bold>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">6372.00 [3020.50]</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">5934.00 [3181.50]</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">237.00</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.610</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <bold>GDNF (pg/mL)</bold>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">8605.50 [3281.00]</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">7570.50 [4574.75]</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">208.00</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.249</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <bold>Sleep Parameters</bold>
</td>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <bold>Total Sleep Time (hrs)</bold>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">3.99 [2.37]</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">5.74 [2.37]</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">95.00</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&lt;0.001
                                    <xref ref-type="table-fn" rid="tfn2">*</xref>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <bold>Sleep Efficiency (%)</bold>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">52.84 [33.80]</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">74.65 [33.80]</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">94.50</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&lt;0.001
                                    <xref ref-type="table-fn" rid="tfn2">*</xref>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <bold>PLMs (events/hr)</bold>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">4.28 [4.65]</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">4.50 [5.86]</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">223.50</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.543</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <bold>Anthropometric</bold>
</td>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <bold>BMI (kg/m</bold>
                                    <sup>

                                        <bold>2</bold>
                                    </sup>
                                    <bold>)</bold>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">26.48 [4.35]</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">28.01 [3.45]</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">331.00</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.116</td>
                            </tr>
                        </tbody>
                    </table>
                    <table-wrap-foot>
                        <p>Note: IQR = Interquartile Range;</p>
                        <fn-group content-type="footnotes">
                            <fn id="tfn2">
                                <label>*</label>
                                <p>Indicates statistical significance (p &lt; 0.05).</p>
                            </fn>
                        </fn-group>
                    </table-wrap-foot>
                </table-wrap>
                <p>No statistically significant differences were found between the insomnia and normal sleeper groups in the circulating levels of either neurotrophic factor. The median BDNF level was 6372.00 pg/mL in the insomnia group compared to 5934.00 pg/mL in the normal group (U = 237.00, p = 0.610). Similarly, the median GDNF level was 8605.50 pg/mL in the insomnia group and 7570.50 pg/mL in the normal group (U = 208.00, p = 0.249).</p>
                <p>In contrast, profound and statistically significant differences were observed in objective sleep measures. As expected, the insomnia group demonstrated significantly lower Total Sleep Time (Median: 3.99 vs. 5.74 hours; U = 95.00, p &lt; 0.001) and lower Sleep Efficiency (Median: 52.84% vs. 74.65%; U = 94.50, p &lt; 0.001) compared to the normal sleeper group. No significant between-group differences were detected for BMI, Periodic Limb Movements during Sleep (PLMs), or other secondary sleep-related metrics (all p &gt; 0.05).</p>
            </sec>
            <sec id="sec15">
                <title>3.3 Associations between neurotrophic factors and sleep parameters</title>
                <p>Spearman&#x2019;s rank-order correlation was performed to assess the relationships between BDNF, GDNF, and key sleep parameters across the entire sample (N = 46). A very strong positive correlation was observed between BDNF and GDNF levels (&#x03c1; = 0.835, p &lt; 0.001). As expected, Total Sleep Time and Sleep Efficiency were also very strongly correlated (&#x03c1; = 0.975, p &lt; 0.001). However, neither BDNF nor GDNF showed any significant correlation with Total Sleep Time (BDNF: &#x03c1; = 0.142, p = 0.212; GDNF: &#x03c1; = 0.097, p = 0.393) or Sleep Efficiency (BDNF: &#x03c1; = 0.141, p = 0.215; GDNF: &#x03c1; = 0.086, p = 0.449). These bivariate correlations indicate no direct linear relationship between neurotrophic factors and sleep parameters across the sample. However, as shown in the subsequent regression analysis, more complex relationships emerge when accounting for other variables.</p>
            </sec>
            <sec id="sec16">
                <title>3.4 Regression analysis</title>
                <p>To avoid multicollinearity between the highly correlated Total Sleep Time and Sleep Efficiency (&#x03c1; = 0.975, p &lt; 0.001), separate multiple regression models were tested (
                    <xref ref-type="table" rid="T3">
Table 3</xref>). For BDNF, neither model was statistically significant overall. However, Sleep Efficiency was a significant unique predictor in its respective model (p = 0.034), while Total Sleep Time approached significance (p = 0.065). For GDNF, neither model was significant overall, but several predictors approached significance, including Diagnosis and the sleep parameters (all p-values between 0.052 and 0.079). Across all models, Age and BMI were not significant predictors.</p>
                <table-wrap id="T3" orientation="portrait" position="float">
                    <label>
Table 3. </label>
                    <caption>
                        <title>Multiple Regression Analyses Predicting BDNF and GDNF levels from separate sets of predictors
                            <xref ref-type="table-fn" rid="tfn1">*</xref>.</title>
                    </caption>
                    <table content-type="article-table" frame="hsides">
                        <thead>
                            <tr>
                                <th align="left" colspan="1" rowspan="1" valign="top">Dependent variable</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Model</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Predictors entered</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">R
                                    <sup>2</sup>
                                </th>
                                <th align="left" colspan="1" rowspan="1" valign="top">
Adjusted R
                                    <sup>2</sup>
                                </th>
                                <th align="left" colspan="1" rowspan="1" valign="top">
F-statistic (df
)</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">
p-value (Model)</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">
Significant predictors (p &lt; 0.05)</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">
Notable trends (p &lt; 0.10)</th>
                            </tr>
                        </thead>
                        <tbody>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <bold>BDNF</bold>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Diagnosis, TST, Age, BMI</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">.089</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">.000</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">F(4,41) = 1.002</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">.418</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">None</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">TST (p = .065)</td>
                            </tr>
                            <tr>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1" valign="top">2</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Diagnosis, SE, Age, BMI</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">.113</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">.027</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">F(4,41) = 1.309</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">.283</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">SE (p = .034)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">None</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <bold>GDNF</bold>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">3</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Diagnosis, SE, Age, BMI</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">.114</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">.027</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">F(4,41) = 1.315</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">.281</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">None</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Diagnosis (p = .052), SE (p = .056)</td>
                            </tr>
                            <tr>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1" valign="top">4</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Diagnosis, TST, Age, BMI</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">.101</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">.013</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">F(4,41) = 1.154</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">.345</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">None</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Diagnosis (p = .065), TST (p = .079)</td>
                            </tr>
                        </tbody>
                    </table>
                    <table-wrap-foot>
                        <fn-group content-type="footnotes">
                            <fn id="tfn1">
                                <label>*</label>
                                <p>Separate regression models were tested to avoid multicollinearity between the highly correlated Total Sleep Time (TST) and Sleep Efficiency (SE) (&#x03c1; = 0.975, p &lt; 0.001). The table shows unstandardized coefficients. TST = Total Sleep Time; SE = Sleep Efficiency.</p>
                            </fn>
                        </fn-group>
                    </table-wrap-foot>
                </table-wrap>
            </sec>
            <sec id="sec17">
                <title>3.5 Post-hoc power analysis</title>
                <p>Post-hoc power analysis revealed that the study was underpowered to detect the small effect sizes observed for the neurotrophic factors. For the BDNF comparison (effect size r = 0.075), the achieved statistical power was 9.7%. For the GDNF comparison (effect size r = 0.170), the achieved power was 29.9%. Conventionally, a power of 80% is considered adequate for detecting true effects.</p>
            </sec>
        </sec>
        <sec id="sec18" sec-type="discussion">
            <title>4. Discussion</title>
            <p>This study examined the relationship between circulating neurotrophic factors and objective sleep parameters in adults with chronic insomnia and normal sleepers. Our findings present a clear contrast. We confirmed significant objective sleep disturbances in the insomnia group, who showed severely reduced total sleep time and sleep efficiency compared to controls. Contrary to our hypothesis, however, we found no differences in circulating BDNF or GDNF levels between groups, and initial correlation analyses showed no direct associations with sleep continuity. A more complex relationship was revealed through multivariate analysis: although the overall regression model was not significant (F(4,41) = 1.309, p = 0.283, R
                <sup>2</sup> = 0.113), sleep efficiency independently predicted BDNF levels (p = 0.034). This specific statistical association merits further investigation, although its biological significance remains uncertain.</p>
            <p>We found no significant differences in BDNF (p = 0.610) or GDNF (p = 0.249) levels between the insomnia and control groups, nor were there direct bivariate correlations with sleep efficiency or total sleep time. However, a more complicared relationship emerged in the regression analysis: when controlling for diagnosis, age, and BMI, Sleep Efficiency was a significant individual predictor of BDNF levels (p = 0.034). These findings differ from prior studies reporting lower BDNF or GDNF in insomnia
                <sup>
                    <xref ref-type="bibr" rid="ref19">19</xref>,
                    <xref ref-type="bibr" rid="ref20">20</xref>
                </sup> or positive associations with sleep efficiency.
                <sup>
                    <xref ref-type="bibr" rid="ref23">23</xref>,
                    <xref ref-type="bibr" rid="ref24">24</xref>
                </sup> The discrepancies may reflect differences in sample size, assay methods, or participant characteristics. The low statistical power (9.7% for BDNF, 29.9% for GDNF) limits our ability to detect small effects, suggesting caution in interpreting these null results and the specific finding for BDNF and sleep efficiency.</p>
            <p>Methodological differences in quantifying BDNF and GDNF likely contribute to the divergence from prior work. The absolute concentrations we measured differ from other reports, suggesting potential variations in assay specificity or the molecular forms detected (e.g., pro-BDNF vs. mature BDNF). This lack of standardization poses a significant challenge for cross-study comparison and highlights the need for consensus methodologies in the field. Furthermore, the strong positive correlation observed between BDNF and GDNF in our study is a notable finding. The strong BDNF-GDNF correlation warrants further investigation to understand their relationship in sleep disorders. The dissociation between bivariate and multivariate analyses implies that while BDNF and GDNF may not show simple linear relationships with sleep continuity, BDNF may have a more specific association with sleep efficiency when other factors are considered. This further suggests that their peripheral levels are not a direct reflection of the chronic inability to maintain sleep but may be involved in other aspects of sleep physiology.</p>
            <p>Our multivariate regression analyses, corrected for multicollinearity, reveal a complex relationship. Despite the overall model&#x2019;s lack of significance, the specific finding that Sleep Efficiency was a unique predictor of BDNF (p = 0.034) suggests that sleep continuity, specifically the ability to maintain sleep (efficiency), may be more relevant to BDNF regulation than total duration. This isolated finding should be interpreted as a preliminary signal that is conceptually aligned with models where sleep fragmentation disrupts neurotrophic support. Critically, other predictors, including diagnosis, did not make a unique statistically significant contribution. This collective evidence suggests that the utility of circulating BDNF and GDNF as standalone biomarkers for insomnia severity or sleep continuity is limited, though the specific link between BDNF and Sleep Efficiency merits further scrutiny. Our findings contribute to a growing body of evidence indicating that peripheral BDNF levels do not consistently serve as a reliable proxy for insomnia diagnosis or its core sleep continuity.
                <sup>
                    <xref ref-type="bibr" rid="ref17">17</xref>
                </sup> While BDNF is unequivocally a key mediator of synaptic plasticity and neuronal health in the brain,
                <sup>
                    <xref ref-type="bibr" rid="ref24">24</xref>
                </sup> its expression in peripheral blood may be influenced by a multitude of factors not captured here, including genetic background, physical activity, diurnal rhythm, and unmeasured metabolic or inflammatory states.
                <sup>
                    <xref ref-type="bibr" rid="ref16">16</xref>,
                    <xref ref-type="bibr" rid="ref25">25</xref>
                </sup> Our evidence indicates the biological heterogeneity of insomnia and suggest that neurotrophic deficits may be a feature of a specific insomnia endophenotype, which was not differentiated in our present sample. The strong positive correlation observed between BDNF and GDNF, however, is an important finding that warrants further investigation to understand their coordinated regulation in the context of sleep disorders.</p>
            <p>This proposed endophenotype, a distinct and measurable subtype within the broader insomnia population, might be characterized by specific physiological or genetic markers. For example, patients with high levels of cognitive and physiological hyperarousal, a core feature of insomnia, may represent a subgroup where neurotrophic factor dysregulation is most pronounced. Chronic stress and hyperarousal are known to suppress BDNF expression in limbic circuits
                <sup>
                    <xref ref-type="bibr" rid="ref17">17</xref>,
                    <xref ref-type="bibr" rid="ref18">18</xref>
                </sup>; it is plausible that this central deficit is more likely to be reflected in the periphery within this hyperaroused subgroup. Also, genetic factors likely play a moderating role. Carriers of specific polymorphisms, such as the BDNF Val66Met variant (rs6265) which impacts activity-dependent BDNF secretion, may be more vulnerable to sleep-loss-induced alterations in neurotrophic signaling.
                <sup>
                    <xref ref-type="bibr" rid="ref26">26</xref>&#x2013;
                    <xref ref-type="bibr" rid="ref28">28</xref>
                </sup> Our sample, while well-characterized for sleep, was not stratified by arousal metrics or genetic profile, which could have obscured a significant signal in a more homogenous subgroup. Another promising candidate for such an endophenotype is insomnia comorbid with objective cognitive deficits, particularly in memory consolidation, a process heavily dependent on sleep-related BDNF activity.</p>
            <sec id="sec19">
                <title>4.1 Limitations and future directions</title>
                <p>Our study has several limitations. Its cross-sectional nature prevents causal inference. As indicated in the results, a post-hoc power analysis revealed that our study was underpowered to detect small effect sizes; our null findings for the neurotrophic factors should therefore be considered inconclusive for small effects rather than definitive evidence of no difference. In addition, the significant association between Sleep Efficiency and BDNF, while statistically significant, was found in an underpowered study and requires replication. The lack of data on other potential confounders, such as detailed stress markers, physical activity, or cognitive performance, means that important modulating variables were not accounted for. Finally, while we statistically addressed the high correlation between TST and SE, this collinearity should be considered in the design of future studies.</p>
                <p>Future research should build upon these null findings by prioritizing methodological standardization. Investigating neurotrophic factors in conjunction with a wider panel of biomarkers (e.g., inflammatory cytokines, stress hormones) within larger, well-phenotyped cohorts is essential. Crucially, future studies should pre-specify and recruit participants based on endophenotypic traits, such as high hyperarousal, specific genetic profiles, or marked cognitive impairment, to determine whether neurotrophic pathways are most relevant in specific insomnia subtypes. Research should also explore relationships with other sleep dimensions, like EEG spectral power or sleep-dependent memory consolidation, to uncover roles beyond simple sleep continuity.</p>
            </sec>
        </sec>
        <sec id="sec20" sec-type="conclusion">
            <title>5. Conclusion</title>
            <p>This study confirms objective sleep deficits in chronic insomnia but finds no simple bivariate correlations between sleep continuity metrics and neurotrophic factor levels. A multivariate analysis indicated that within a non-significant overall model, Sleep Efficiency was a significant predictor of BDNF, pointing to a potential specific relationship. However, the post-hoc power analysis revealed low statistical power to detect small effect sizes. Therefore, the null group differences and the isolated BDNF/Sleep Efficiency finding must be interpreted with caution and require confirmation in larger, sufficiently powered studies. The strong correlation between BDNF and GDNF further highlights a need to investigate their coordinated role in sleep disorders.</p>
        </sec>
        <sec id="sec21">
            <title>Ethics approval and consent to participate</title>
            <p>All participants provided their signed, written informed consent. This study adheres to the Helsinki guidelines and was approved by the Ethics Committee of Kermanshah University of Medical Sciences (IR.KUMS.REC.1403.466).</p>
        </sec>
        <sec id="sec22">
            <title>Ethics statement</title>
            <p>The study was approved by the Ethics Committee of Kermanshah University of Medical Sciences (IR.KUMS.REC.1403.466), which mandates protection of participant confidentiality. Controlled sharing of de-identified data for research purposes is permitted.</p>
        </sec>
        <sec id="sec23">
            <title>Access process</title>
            <p>Researchers may request the de-identified dataset by emailing the corresponding author (Sepideh Nouraei, 
                <email xlink:href="mailto:snouraei96@gmail.com">snouraei96@gmail.com</email>) with a brief description of the intended use. Requests will be reviewed within 4 weeks. Approved requesters will receive the data under a CC-BY 4.0 license and may be asked to sign a simple data use agreement.</p>
        </sec>
    </body>
    <back>
        <sec id="sec26" sec-type="data-availability">
            <title>Availability of data and materials</title>
            <p>The raw, identifiable polysomnography (PSG) datasets cannot be shared publicly due to their large size (&gt;1GB per participant), lack of appropriate repository infrastructure, and because public deposition of identifiable physiological signals was not covered by the informed consent or ethics approval.</p>
            <p>The de-identified dataset underlying the results (including sleep efficiency, total sleep time, serum BDNF and GDNF levels, age, BMI, and group assignment) is available upon request.</p>
        </sec>
        <ack>
            <title>Acknowledgments</title>
            <p>The authors would like to express their gratitude to the participants for their invaluable contributions to this research. We also extend our thanks to all the research coordinators and the PSG technician, Saeed Salimi, for their assistance with data collection for this study.</p>
        </ack>
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