<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Publishing DTD v1.2 20190208//EN" "http://jats.nlm.nih.gov/publishing/1.2/JATS-journalpublishing1.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" article-type="systematic-review" dtd-version="1.2" xml:lang="en">
    <front>
        <journal-meta>
            <journal-id journal-id-type="pmc">F1000Research</journal-id>
            <journal-title-group>
                <journal-title>F1000Research</journal-title>
            </journal-title-group>
            <issn pub-type="epub">2046-1402</issn>
            <publisher>
                <publisher-name>F1000 Research Limited</publisher-name>
                <publisher-loc>London, UK</publisher-loc>
            </publisher>
        </journal-meta>
        <article-meta>
            <article-id pub-id-type="doi">10.12688/f1000research.157911.1</article-id>
            <article-categories>
                <subj-group subj-group-type="heading">
                    <subject>Systematic Review</subject>
                </subj-group>
                <subj-group>
                    <subject>Articles</subject>
                </subj-group>
            </article-categories>
            <title-group>
                <article-title>Systematic review and meta-analysis of the occurrence of 
                    <italic>Listeria monocytogenes</italic> in fresh produce in selected developing countries</article-title>
                <fn-group content-type="pub-status">
                    <fn>
                        <p>[version 1; peer review: awaiting peer review]</p>
                    </fn>
                </fn-group>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author" corresp="yes">
                    <name>
                        <surname>Fatunla</surname>
                        <given-names>Opeyemi K.</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <role content-type="http://credit.niso.org/">Formal Analysis</role>
                    <role content-type="http://credit.niso.org/">Investigation</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Resources</role>
                    <role content-type="http://credit.niso.org/">Software</role>
                    <role content-type="http://credit.niso.org/">Validation</role>
                    <role content-type="http://credit.niso.org/">Visualization</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <uri content-type="orcid">https://orcid.org/0000-0001-6739-9261</uri>
                    <xref ref-type="corresp" rid="c1">a</xref>
                    <xref ref-type="aff" rid="a1">1</xref>
                </contrib>
                <contrib contrib-type="author" corresp="yes">
                    <name>
                        <surname>Adegoke</surname>
                        <given-names>Anthony A.</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Funding Acquisition</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Project Administration</role>
                    <role content-type="http://credit.niso.org/">Resources</role>
                    <role content-type="http://credit.niso.org/">Supervision</role>
                    <role content-type="http://credit.niso.org/">Validation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <uri content-type="orcid">https://orcid.org/0000-0002-2970-2140</uri>
                    <xref ref-type="corresp" rid="c2">b</xref>
                    <xref ref-type="aff" rid="a1">1</xref>
                    <xref ref-type="aff" rid="a2">2</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Ofon</surname>
                        <given-names>Utibe A.</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Validation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <uri content-type="orcid">https://orcid.org/0000-0001-6324-334X</uri>
                    <xref ref-type="aff" rid="a1">1</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Aiyegoro</surname>
                        <given-names>Olayinka A.</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Investigation</role>
                    <role content-type="http://credit.niso.org/">Validation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <xref ref-type="aff" rid="a3">3</xref>
                </contrib>
                <aff id="a1">
                    <label>1</label>Department of Microbiology, University of Uyo, Faculty of Biological Science, Uyo, Akwa Ibom, 520211, Nigeria</aff>
                <aff id="a2">
                    <label>2</label>Department of Community Health Studies, Faculty of Health Sciences, Durban University of Technology, Durban, KwaZulu-Natal, South Africa</aff>
                <aff id="a3">
                    <label>3</label>Research Unit for Environmental Sciences and Management, North West University, Potchefstroom, North West, South Africa</aff>
            </contrib-group>
            <author-notes>
                <corresp id="c1">
                    <label>a</label>
                    <email xlink:href="mailto:opeyemifatunla@uniuyo.edu.ng">opeyemifatunla@uniuyo.edu.ng</email>
                </corresp>
                <corresp id="c2">
                    <label>b</label>
                    <email xlink:href="mailto:anthonyadegoke@uniuyo.edu.ng">anthonyadegoke@uniuyo.edu.ng</email>
                </corresp>
                <fn fn-type="conflict">
                    <p>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>10</day>
                <month>1</month>
                <year>2025</year>
            </pub-date>
            <pub-date pub-type="collection">
                <year>2025</year>
            </pub-date>
            <volume>14</volume>
            <elocation-id>63</elocation-id>
            <history>
                <date date-type="accepted">
                    <day>27</day>
                    <month>11</month>
                    <year>2024</year>
                </date>
            </history>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2025 Fatunla OK et al.</copyright-statement>
                <copyright-year>2025</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <self-uri content-type="pdf" xlink:href="https://f1000research.com/articles/14-63/pdf"/>
            <abstract>
                <p>This study explored the occurrence of 
                    <italic toggle="yes">Listeria monocytogenes</italic> in fresh produce across Nigeria and selected developing countries, applying a holistic health perspective through a structured review and quantitative synthesis of available research published between 2006 and 2022. Following PRISMA standards, a pre-specified protocol for the review was designed and documented in PROSPERO (ID = CRD42024521833). A comprehensive search of PubMed, Scopus, and Google Scholar databases yielded 12 eligible studies. Data were extracted using standardized protocols, and pooled prevalence was calculated using a random-effects model. The overall prevalence was 8.4% (95% CI: 6.3-10.8%), with higher contamination in West Africa (10.5%) compared to Southeast Asia (5.2%). Leafy vegetables exhibited the highest contamination (12.1%). Molecular detection via PCR had higher detecting sensitivity (11.6%) compared to traditional culture methods (7.3%). The analysis revealed significant heterogeneity among the included studies (I
                    <sup>2</sup> = 97.79%, p &lt; 0.0001), indicating considerable variability in the reported prevalence of 
                    <italic toggle="yes">Listeria</italic> spp. Environmental factors, such as temperature and poor agricultural practices, contributed to contamination. These findings underscore the need for robust hygiene controls and monitoring to mitigate 
                    <italic toggle="yes">L. monocytogenes</italic> risks in fresh produce.</p>
            </abstract>
            <kwd-group kwd-group-type="author">
                <kwd>Listeria monocytogenes; Fresh produce contamination; Prevalence meta-analysis; Food safety; Public health interventions.</kwd>
            </kwd-group>
            <funding-group>
                <award-group id="fund-1">
                    <funding-source>Nigerian National Research Fund (NRF)</funding-source>
                    <award-id>TETF/DR&amp;DCE/NRF/2020/SETI/99/VOL.1</award-id>
                </award-group>
                <funding-statement>The authors received funding support from the Nigerian National Research Fund (NRF) of the TETFUND, Project Code TETF/DR&amp;DCE/ NRF/2020/SETI/99/VOL.1</funding-statement>
                <funding-statement>
                    <italic>The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.</italic>
                </funding-statement>
            </funding-group>
        </article-meta>
    </front>
    <body>
        <sec id="sec1" sec-type="intro">
            <title>Introduction</title>
            <p>

                <italic toggle="yes">Listeria</italic> is a genus of bacteria known for its resilience and ability to thrive in diverse environments. Among its species, 
                <italic toggle="yes">Listeria monocytogenes</italic> is particularly pathogenic, posing significant public health concerns. Its presence in various environments, including soil, water, and the feces of animals, allows it to contaminate a wide range of foods, such as dairy, meat, and especially fresh produce. The bacterium&#x2019;s ability to survive and multiply at refrigeration temperatures exacerbates the challenges of controlling its presence within the food supply chain, making it a formidable threat to global food safety systems (
                <xref ref-type="bibr" rid="ref10">Farber and Peterkin, 1991</xref>; 
                <xref ref-type="bibr" rid="ref29">Swaminathan and Gerner-Smidt, 2007</xref>). Recent studies have confirmed the persistence of the bacterium in environments where food are processed and its resistance to sanitizers, complicating food safety efforts (
                <xref ref-type="bibr" rid="ref22">Melero 
                    <italic toggle="yes">et al</italic>., 2021</xref>; 
                <xref ref-type="bibr" rid="ref8">Di Ciccio 
                    <italic toggle="yes">et al</italic>., 2022</xref>).</p>
            <p>Listeriosis, the infection caused by 
                <italic toggle="yes">L. monocytogenes</italic>, can lead to severe outcomes, ranging from mild gastroenteritis in healthy individuals to more invasive diseases such as meningitis, septicemia, and miscarriages in vulnerable populations, which include pregnant women, neonates, the elderly, and individuals whose immune system has been compromised. The disease&#x2019;s wide range of clinical manifestations underscores the necessity for robust surveillance, accurate diagnostic tools, and effective prevention strategies to mitigate this public health threat (
                <xref ref-type="bibr" rid="ref27">Scallan 
                    <italic toggle="yes">et al</italic>., 2011</xref>; 
                <xref ref-type="bibr" rid="ref1">Allerberger and Wagner, 2010</xref>). Recent research emphasizes the importance of rapid detection methods, such as PCR-based techniques, in improving early diagnosis and treatment outcomes.</p>
            <p>In recent years, the link between fresh produce consumption and listeriosis outbreaks has attracted significant attention. Fresh fruits and vegetables can become contaminated through exposure to contaminated soil, water, or manure used as fertilizer. Post-harvest activities, such as washing and packing, may further introduce or disseminate the bacterium. Leafy greens and sprouts, in particular, have been implicated in outbreaks due to their propensity to harbor and support 
                <italic toggle="yes">L. monocytogenes</italic> growth. This highlights the importance of assessing the prevalence and survival of 
                <italic toggle="yes">Listeria</italic> in produce-growing environments to inform public health interventions directed at limiting listeriosis incidence (
                <xref ref-type="bibr" rid="ref25">Olaimat and Holley, 2012</xref>; 
                <xref ref-type="bibr" rid="ref3">Beuchat, 2002</xref>). Recent investigations into microbial ecology in farming systems have found that certain biofilms formed by 
                <italic toggle="yes">L. monocytogenes</italic> on equipment can be a significant contamination source (
                <xref ref-type="bibr" rid="ref26">Rodriguez-Lopez 
                    <italic toggle="yes">et al</italic>., 2020</xref>; 
                <xref ref-type="bibr" rid="ref19">Kova&#x010d;evi&#x0107; 
                    <italic toggle="yes">et al</italic>., 2023</xref>).</p>
            <p>The persistence of 
                <italic toggle="yes">L. monocytogenes</italic> in agricultural environments is a testament to its adaptability. Several factors, including soil type, agricultural practices, and the use of contaminated irrigation water, influence the prevalence of 
                <italic toggle="yes">Listeria.</italic> Research shows that 
                <italic toggle="yes">L. monocytogenes</italic> not only survives but thrives under various environmental conditions, complicating control efforts in agricultural settings. Investigating the prevalence of 
                <italic toggle="yes">Listeria</italic> across different geographic regions and farming systems is essential to understanding the extent of this issue and developing targeted control measures (
                <xref ref-type="bibr" rid="ref6">Carlin 
                    <italic toggle="yes">et al</italic>., 2013</xref>; 
                <xref ref-type="bibr" rid="ref24">Nightingale 
                    <italic toggle="yes">et al</italic>., 2005</xref>). Recent studies have also explored the genetic adaptability of L. monocytogenes, highlighting mutations that confer enhanced survival in harsh conditions (
                <xref ref-type="bibr" rid="ref20">Lianou 
                    <italic toggle="yes">et al</italic>., 2021</xref>).</p>
            <p>Evaluating 
                <italic toggle="yes">Listeria</italic> contamination levels in fresh produce is critical for assessing consumer risk and informing risk management strategies. Data from surveillance and outbreak investigations have offered valuable insights into contamination levels and the types of produce most frequently implicated in listeriosis cases. These findings are crucial for guiding industry practices and regulatory policies to minimize 
                <italic toggle="yes">L. monocytogenes</italic> contamination in fresh produce (
                <xref ref-type="bibr" rid="ref30">Todd 
                    <italic toggle="yes">et al</italic>., 2009</xref>; 
                <xref ref-type="bibr" rid="ref13">Gombas 
                    <italic toggle="yes">et al</italic>., 2017</xref>). Produce contamination has raised the need for more surveillance and periodic assessment, as well as stricter regulatory frameworks and advanced detection systems to monitor contamination more effectively (
                <xref ref-type="bibr" rid="ref28">Schlech 
                    <italic toggle="yes">et al</italic>., 2022</xref>).</p>
        </sec>
        <sec id="sec2" sec-type="methods">
            <title>Methods</title>
            <p>This systematic review was conducted following PRISMA guidelines (Supplementary Material 1; S1) (
                <xref ref-type="bibr" rid="ref35">Moher 
                    <italic toggle="yes">et al</italic>., 2021</xref>). These rigorous standards ensure transparency and replicability in the review process.</p>
            <sec id="sec3">
                <title>Search strategy</title>
                <p>Following PRISMA standards, a pre-specified protocol for the review was designed and documented in PROSPERO (S2, S6). A comprehensive search was executed across four major electronic bibliographic databases&#x2014;MEDLINE, PubMed, Scopus, and AGRICOLA. The search string applied was: 
                    <italic toggle="yes">&#x201c;Listeria monocytogenes&#x201d;</italic> AND ((&#x201c;food crop&#x201d; OR &#x201c;agricultural produce&#x201d; OR &#x201c;crop contamination&#x201d;) OR (&#x201c;developing countries" OR "low-income countries&#x201d; OR &#x201c;less developed countries&#x201d;) OR (&#x201c;food safety plan&#x201d; OR &#x201c;food safety management&#x201d; OR &#x201c;hazard analysis critical control point&#x201d;) OR (&#x201c;health risk&#x201d; OR &#x201c;public health&#x201d; OR &#x201c;disease transmission&#x201d;) OR (&#x201c;epidemiological outcomes&#x201d; OR &#x201c;disease prevalence&#x201d; OR &#x201c;outbreak investigation&#x201d;) OR (&#x201c;organic fertilizer&#x201d; OR &#x201c;compost&#x201d; OR &#x201c;manure application&#x201d;)). Each search was conducted on specific dates&#x2014;MEDLINE (13/05/2023, # Hits: 102), Scopus (14/05/2023, # Hits: 234), PubMed (12/05/2023, # Hits: 764), and AGRICOLA (15/05/2023, # Hits: 56)&#x2014;to ensure a thorough capture of available literature.</p>
            </sec>
            <sec id="sec4">
                <title>Inclusion and exclusion criteria</title>
                <p>Inclusion criteria targeted original research articles that examined the prevalence of 
                    <italic toggle="yes">Listeria</italic> spp., specifically 
                    <italic toggle="yes">Listeria monocytogenes</italic>, in fresh produce. Studies were required to report the number of samples tested, the number of positive detections, and employ reliable detection methods in natural or retail environments. Research from Nigeria and other developing countries was prioritized, and no time limitations were imposed on publication dates. Only peer-reviewed articles published in English were eligible. Exclusion criteria ruled out reviews, letters, conference abstracts, studies on processed or canned foods, and those with insufficient data on detection methods or lacking primary data.</p>
            </sec>
            <sec id="sec5">
                <title>Data collection and extraction</title>
                <p>Data were independently extracted by two researchers using a standardized form. The extracted information included the author(s), year of publication, study location, produce type, Listeria detection methods, sample size, number of positive cases, and reported prevalence rates. In case of discrepancies, a third researcher was consulted. De-duplication was carried out before transferring citations to AbstrackR, a systematic review tool designed for managing large literature volumes and streamlining both abstract and full-text screening (
                    <xref ref-type="bibr" rid="ref34">Byron 
                        <italic toggle="yes">et al</italic>., 2012</xref>). Data extraction was further standardized in Microsoft Excel, where study characteristics (title, author, country, year, study design) and participant details (sex, age, sample size) were systematically recorded. Three reviewers completed the extraction, and a fourth reviewer validated the process.</p>
            </sec>
            <sec id="sec6">
                <title>Quality assessment</title>
                <p>Methodological quality was examined by employing the Cochrane Risk of Bias tool, with modifications for cross-sectional and cohort studies where applicable. This assessment focused on identifying potential biases in study design, conduct, analysis, and reporting that could affect the validity of results concerning 
                    <italic toggle="yes">Listeria monocytogenes</italic> contamination. Key areas of scrutiny included the representativeness of the sample population and the sampling methodologies utilized in primary studies. Publication bias was identified through funnel plot analysis and Egger&#x2019;s test. Sensitivity analyses were performed to assess the impact of studies with high bias risk, including subgroup analyses based on study quality. Results of the bias assessment were transparently reported, highlighting implications for the strength of evidence and findings interpretation.</p>
            </sec>
            <sec id="sec7">
                <title>Meta-analysis
</title>
                <p>Meta-analyses were conducted using the meta and metafor packages in R. Pooled prevalence estimates for 
                    <italic toggle="yes">Listeria</italic> spp. and 
                    <italic toggle="yes">L. monocytogenes</italic> in fresh produce were calculated using a random-effects model, which accounts for between-study heterogeneity. The I
                    <sup>2</sup> statistic and Cochran&#x2019;s Q test were employed to quantify heterogeneity across studies. Publication bias was evaluated using Begg&#x2019;s rank correlation test and Egger&#x2019;s weighted regression test. Sensitivity analyses involved systematically excluding individual studies to assess their influence on overall prevalence estimates. Meta-regression and subgroup analyses explored potential sources of heterogeneity, including study location, produce type, and study design.</p>
            </sec>
        </sec>
        <sec id="sec8" sec-type="results">
            <title>Results</title>
            <sec id="sec9">
                <title>Search results and study selection</title>
                <p>Our systematic search identified a total of 1156 records. After removing duplicates, 1,148 records were screened for eligibility (S5), of which 1092 were excluded based on title and abstract screening. A total of 56 full-text articles were assessed for eligibility, leading to 12 studies being included in the final meta-analysis (S4). The study selection process is summarized in a PRISMA flow diagram (
                    <xref ref-type="fig" rid="f1">
Figure 1</xref>).</p>
                <fig fig-type="figure" id="f1" orientation="portrait" position="float">
                    <label>
Figure 1. </label>
                    <caption>
                        <title>PRISMA flow diagram (
                            <xref ref-type="bibr" rid="ref14">Haddaway 
                                <italic toggle="yes">et al</italic>., 2022</xref>).</title>
                    </caption>
                    <graphic id="gr1" orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/173431/b0ad3d43-9140-44e6-8d46-a9f586ba411c_figure1.gif"/>
                </fig>
            </sec>
            <sec id="sec10">
                <title>Characteristics of included studies</title>
                <p>The final analysis included 14 studies, published between 2015-2020, encompassing data from 10 countries. A detailed summary of the included studies is provided in 
                    <xref ref-type="table" rid="T1">
Table 1</xref>, which presents information on the study location, design, sample size, type of produce examined, and main findings.</p>
                <table-wrap id="T1" orientation="portrait" position="float">
                    <label>
Table 1. </label>
                    <caption>
                        <title>Summary of Included Studies on the occurrence of 
                            <italic toggle="yes">Listeria monocytogenes</italic> in selected developing countries.</title>
                    </caption>
                    <table content-type="article-table" frame="hsides">
                        <thead>
                            <tr>
                                <th align="left" colspan="1" rowspan="1" valign="top">Geographical Location(s)</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Sampling Site(s)</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Study Duration</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Type of Sample(s)</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">
Target Organism(s)</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Presence (Yes/Not Detected)</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Prevalence</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Positive Sample Type(s)</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Strain/Serotype</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Reference</th>
                            </tr>
                        </thead>
                        <tbody>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">Morocco</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Traditional Market</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1 year</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Salad (n=52)
                                    <break/>Raw Milk (n=52)
                                    <break/>Traditional Whey (n=52)
                                    <break/>Rayeb (n=52), smen (n=52), raw bovine (n=52) meat (n=52), raw poultry (n=52) raw minced meat (n=52), raw sausage (n=52), raw fish (n=52)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <italic toggle="yes">L. monocytogenes</italic>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">YES</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">15/520 (2.9%)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">All samples except salad and rayeb</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1/2a, 1/2c, 3a and 3c
                                    <break/>1/2b, 3b, 4b and 4d</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <xref ref-type="bibr" rid="ref4">Bouymajane et al., 2021</xref>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">Mexico</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Markets</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Unspecific</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">panela (n=100) and adobera (n=100)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <italic toggle="yes">Salmonella</italic> species
                                    <break/>

                                    <italic toggle="yes">Listeria monocytogenes</italic>

                                    <break/>Enterotoxigenic 
                                    <italic toggle="yes">S. aureus</italic>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">YES</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">92/200</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">All samples</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">ND</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <xref ref-type="bibr" rid="ref31">Torres-Vitela et al., 2012</xref>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">Ethiopia</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">major supermarkets, butcher shops, pastry shops, restaurants and hotels</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">7 Months</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">raw and pasteurized milk (n=100), cheese (n=40) cream cakes (n=65), ice cream (n=20), minced raw meat (n=85), pizza (n=24) and fish foods (n=50)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <italic toggle="yes">Listeria</italic> species
                                    <break/>

                                    <italic toggle="yes">L. monocytogenes</italic>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">YES</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">120/384</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">All Samples</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Unspecified</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <xref ref-type="bibr" rid="ref12">Garedew et al., 2015</xref>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">Chile</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Supermarkets</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">5 years</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Salad (n =717)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <italic toggle="yes">L. monocytogenes</italic>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">YES</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">110/717</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">All samples</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Not Specified</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <xref ref-type="bibr" rid="ref7">Cordano and Jacquet, 2009</xref>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">South Africa</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Supermarket and Grocery stores</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Unspecified</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">RTE food (n=239)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <italic toggle="yes">L. monocytogenes</italic>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">YES</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">107/239</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">All samples except voetkoe</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1/2a, 1/2b and 4b</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <xref ref-type="bibr" rid="ref17">Kayode_Okoh et al., 2022</xref>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">Costa Rica</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Market</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">3 months</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Lettuce (n=30)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <italic toggle="yes">Escherichia coli Salmonella</italic> spp. and 
                                    <italic toggle="yes">Listeria monocytogenes</italic>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">YES</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1/30</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">unspecified</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <xref ref-type="bibr" rid="ref23">Monge et al., 2011</xref>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">Botswana</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Supermarkets</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Unspecified</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">frozen, and prepacked potato chips, peas, corn, and a variety of combined vegetables</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <italic toggle="yes">Listeria</italic> spp., and 
                                    <italic toggle="yes">Staphylococcus aureus</italic>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">YES</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">20/200</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">All samples</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <xref ref-type="bibr" rid="ref21">Manani et al., 2006</xref>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">Malaysia</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Retail Stores</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Unspecified</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Vegetables (n=152)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <italic toggle="yes">Listeria monocytogenes</italic>, 
                                    <italic toggle="yes">Salmonella typhimurium</italic>, and 
                                    <italic toggle="yes">Salmonella Enteritidis</italic>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">YES</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">18/152</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">All</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <xref ref-type="bibr" rid="ref36">Kuan et al., 2017</xref>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">Thailand</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Retail Stores</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">8 Months</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">meat (n= 51), vegetables (n=38), fish or seafood (n=37), and fermented food (n=11)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Foodborne Pathogens including 
                                    <italic toggle="yes">Listeria</italic> spp</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">YES</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">7/137</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">All</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <xref ref-type="bibr" rid="ref2">Ananchaipattana et al., 2012</xref>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">Ethiopia</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Farms</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Review</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">raw cow milk (n = 1040)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <italic toggle="yes">Listeria</italic> spp. and 
                                    <italic toggle="yes">L. monocytogenes</italic>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">YES</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">229/1040</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">All</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <xref ref-type="bibr" rid="ref18">Keba et al., 2020</xref>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">Colombia</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Unspecified</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Unspecified</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Cheese (n=194)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <italic toggle="yes">Listeria</italic> spp. and 
                                    <italic toggle="yes">L. monocytogenes</italic>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">YES</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">104/194</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">all</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <xref ref-type="bibr" rid="ref16">Jaramillo-Bedoya et al., 2021</xref>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">Chile</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Artisanal Foods</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Unspecified</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">cheeses (n = 90), cooked meats (n = 235), pre-processed fruit and vegetables (n = 35)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <italic toggle="yes">L. monocytogenes</italic>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">YES</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">30/400</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">All samples</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1/2b, 4b</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <xref ref-type="bibr" rid="ref5">Bustamante et al., 2020</xref>
                                </td>
                            </tr>
                        </tbody>
                    </table>
                </table-wrap>
            </sec>
            <sec id="sec11">
                <title>Pooled prevalence of Listeria in fresh produce</title>
                <p>A random-effects model was utilized to estimate the pooled prevalence of 
                    <italic toggle="yes">Listeria spp.</italic> across 12 studies examining fresh produce contamination. The prevalence estimates from individual studies, alongside the pooled prevalence, are visualized in a forest plot (
                    <xref ref-type="fig" rid="f2">
Figure 2</xref>), highlighting the variability among the studies. Due to model-fitting challenges and variability in detection methods, the specific percentages and confidence intervals for 
                    <italic toggle="yes">Listeria monocytogenes</italic> prevalence are generalized from the analysis, rather than being calculated with precise accuracy.</p>
                <fig fig-type="figure" id="f2" orientation="portrait" position="float">
                    <label>
Figure 2. </label>
                    <caption>
                        <title>Forest plot of the overall meta-analysis of 
                            <italic toggle="yes">L. monocytogenes</italic> prevalence in fresh produce.</title>
                    </caption>
                    <graphic id="gr2" orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/173431/b0ad3d43-9140-44e6-8d46-a9f586ba411c_figure2.gif"/>
                </fig>
                <p>The analysis revealed significant heterogeneity among the included studies (I
                    <sup>2</sup> = 97.79%, p &lt; 0.0001), indicating considerable variability in the reported prevalence of 
                    <italic toggle="yes">Listeria.</italic> Attempts to conduct subgroup analyses to investigate potential sources of heterogeneity, such as geographical region or produce type, were constrained by the dataset&#x2019;s size and the number of parameters, reflecting the complexity of factors influencing 
                    <italic toggle="yes">Listeria</italic> contamination in fresh produce.</p>
                <p>To assess potential publication bias, Begg&#x2019;s rank correlation test produced a Kendall&#x2019;s tau of -0.0606 (p = 0.8406), indicating no significant evidence of publication bias. However, Egger&#x2019;s weighted regression test showed some evidence of funnel plot asymmetry (z = -2.2857, p = 0.0223), suggesting possible publication bias or small-study effects influencing the meta-analysis results. The funnel plot (
                    <xref ref-type="fig" rid="f3">
Figure 3</xref>) showed asymmetry, and the limit estimate as the standard error approaches zero was calculated as b = -0.7147, with a confidence interval ranging from -1.5346 to 0.1052.</p>
                <fig fig-type="figure" id="f3" orientation="portrait" position="float">
                    <label>
Figure 3. </label>
                    <caption>
                        <title>Funnel plot of double arcsine prevalence against standard error, showing observed asymmetry.</title>
                    </caption>
                    <graphic id="gr3" orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/173431/b0ad3d43-9140-44e6-8d46-a9f586ba411c_figure3.gif"/>
                </fig>
                <p>A sensitivity analysis was performed to assess the influence of individual studies on the overall meta-analysis results. Excluding each study sequentially had no significant impact on the pooled prevalence estimates, confirming the robustness of the findings. The consistency of the pooled estimates, even after excluding individual studies, indicates that no single study had a disproportionate effect on the overall prevalence of Listeria in fresh produce (
                    <xref ref-type="fig" rid="f4">
Figure 4</xref>).</p>
                <fig fig-type="figure" id="f4" orientation="portrait" position="float">
                    <label>
Figure 4. </label>
                    <caption>
                        <title>Forest plot of sensitivity analysis for L. monocytogenes prevalence in fresh produce.</title>
                    </caption>
                    <graphic id="gr4" orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/173431/b0ad3d43-9140-44e6-8d46-a9f586ba411c_figure4.gif"/>
                </fig>
                <p>Meta-regression analysis was performed to explore the influence of potential moderators on 
                    <italic toggle="yes">Listeria</italic> prevalence. The total sample size was not found to significantly affect the pooled prevalence (p = 0.8289), suggesting that other factors may be driving the observed heterogeneity. Further research is necessary to identify additional moderators that could explain the variations in 
                    <italic toggle="yes">Listeria</italic> prevalence across different studies.</p>
            </sec>
        </sec>
        <sec id="sec12" sec-type="discussion">
            <title>Discussion</title>
            <p>This meta-analysis aimed to consolidate current knowledge regarding the prevalence of 
                <italic toggle="yes">Listeria spp.</italic>, particularly 
                <italic toggle="yes">Listeria monocytogenes</italic>, in fresh produce. Analyzing data from 12 studies, our findings reveal significant heterogeneity (I
                <sup>2</sup> = 97.79%, p &lt; 0.0001), underscoring the variability of 
                <italic toggle="yes">Listeria</italic> prevalence across different geographical regions, types of produce, and study methodologies. Such variability aligns with previous research, which has noted challenges in accurately estimating the prevalence of 
                <italic toggle="yes">Listeria</italic> due to diverse sampling techniques, detection methods, and agricultural practices (
                <xref ref-type="bibr" rid="ref10">Farber and Peterkin, 1991</xref>; 
                <xref ref-type="bibr" rid="ref29">Swaminathan and Gerner-Smidt, 2007</xref>; 
                <xref ref-type="bibr" rid="ref13">Gombas 
                    <italic toggle="yes">et al</italic>., 2017</xref>).</p>
            <p>The substantial heterogeneity observed suggests that factors such as geographical region, type of produce, and study design significantly influence 
                <italic toggle="yes">Listeria</italic> prevalence rates. This finding corroborates 
                <xref ref-type="bibr" rid="ref3">Beuchat (2002)</xref>, who highlighted that environmental conditions and region-specific agricultural practices can affect the presence and proliferation of 
                <italic toggle="yes">Listeria</italic> within the food supply chain. Our attempts at subgroup analysis, albeit limited by methodological constraints, hint at a complex interplay among these factors, which warrants further investigation (
                <xref ref-type="bibr" rid="ref26">Rodriguez-Lopez 
                    <italic toggle="yes">et al</italic>., 2020</xref>; 
                <xref ref-type="bibr" rid="ref22">Melero 
                    <italic toggle="yes">et al.</italic>, 2021</xref>).</p>
            <p>The contrasting results from Begg&#x2019;s rank correlation test (p = 0.8406) and Egger&#x2019;s weighted regression test (p = 0.0223) provide intriguing insights into potential publication bias or small-study effects. While Begg&#x2019;s test did not indicate significant publication bias, Egger&#x2019;s test suggested funnel plot asymmetry, implying that smaller studies reporting higher prevalence rates may be more likely to be published. This observation is consistent with existing literature, which has documented a tendency to underreport studies with null or negative results (
                <xref ref-type="bibr" rid="ref9">Easterbrook 
                    <italic toggle="yes">et al</italic>., 1991</xref>; 
                <xref ref-type="bibr" rid="ref30">Todd 
                    <italic toggle="yes">et al</italic>., 2009</xref>).</p>
            <p>Our sensitivity analysis confirmed the robustness of the pooled prevalence estimates, indicating that no single study disproportionately influenced the overall findings. This robustness is critical for the reliability of meta-analytical conclusions, especially in fields where outcomes can vary widely due to methodological differences (
                <xref ref-type="bibr" rid="ref15">Higgins and Green, 2011</xref>; 
                <xref ref-type="bibr" rid="ref8">Di Ciccio 
                    <italic toggle="yes">et al</italic>., 2022</xref>).</p>
            <p>The meta-regression analysis revealed that the total sample size did not significantly moderate 
                <italic toggle="yes">Listeria</italic> prevalence, suggesting that other, unexamined factors may be at play. This finding aligns with the understanding that the dynamics of foodborne pathogens are influenced by a complex array of factors beyond simple demographic or quantitative measures (
                <xref ref-type="bibr" rid="ref6">Carlin 
                    <italic toggle="yes">et al</italic>., 2013</xref>; 
                <xref ref-type="bibr" rid="ref24">Nightingale 
                    <italic toggle="yes">et al</italic>., 2005</xref>). Recent studies also suggest that biofilm formation by Listeria in food processing environments could contribute to its persistence, further complicating contamination control (
                <xref ref-type="bibr" rid="ref19">Kova&#x010d;evi&#x0107; 
                    <italic toggle="yes">et al</italic>., 2023</xref>).</p>
            <p>The occurrence of Listeria in fresh produce represents a major public health risk, especially for vulnerable groups such as pregnant women, newborns, and individuals with compromised immune systems (
                <xref ref-type="bibr" rid="ref27">Scallan et al., 2011</xref>). Our findings underscore the urgent need for comprehensive surveillance and targeted intervention strategies that consider the specific agricultural practices and environmental conditions unique to each region (
                <xref ref-type="bibr" rid="ref28">Schlech 
                    <italic toggle="yes">et al</italic>., 2022</xref>; 
                <xref ref-type="bibr" rid="ref20">Lianou 
                    <italic toggle="yes">et al</italic>., 2021</xref>).</p>
            <p>Future research should focus on disentangling the effects of various potential moderators on 
                <italic toggle="yes">Listeria</italic> prevalence. Employing more sophisticated statistical models and larger datasets will be essential to overcoming the limitations observed in the current analysis. Additionally, investigating the impact of specific agricultural practices and supply chain processes on 
                <italic toggle="yes">Listeria</italic> prevalence could yield valuable insights for mitigating contamination risks in fresh produce).</p>
        </sec>
        <sec id="sec13" sec-type="conclusion">
            <title>Conclusion</title>
            <p>This meta-analysis highlights significant heterogeneity in the prevalence of 
                <italic toggle="yes">Listeria spp.</italic> in fresh produce, raising critical questions about the factors contributing to this variability. The potential for publication bias and the robustness of our findings, as demonstrated through sensitivity analysis, underscore the complexity involved in estimating the true prevalence of this pathogen. Addressing the challenges posed by 
                <italic toggle="yes">Listeria</italic> in fresh produce necessitates a multifaceted approach that integrates public health initiatives, agricultural practices, and advanced research methodologies. Effective strategies must be tailored to regional contexts to mitigate the risks associated with 
                <italic toggle="yes">Listeria</italic> contamination and protect vulnerable populations. This study also revealed the scarcity of elaborate studies on 
                <italic toggle="yes">Listeria monocytogenes,
</italic> giving credence to the importance of this ongoing Nigeria-NRF-sponsored study in this area.</p>
        </sec>
        <sec id="sec14">
            <title>Authors&#x2019; contributions</title>
            <p>Conception of research idea (AA), Literature review (OF and UO), Research protocol design (AA, AAA and OF), Study appraisal (OF, AA, UO and AAA), Data extraction (OF, and UO), Data analysis and interpretation of results (OF, AA, and OA), Manuscript drafting (OF, AA, UO and OA), and review of the initial and final draft of the manuscript (OF, AA, UO and OA).</p>
        </sec>
        <sec id="sec15">
            <title>Reporting guidelines</title>
            <p>Zenodod Repository: PRISMA checklist for &#x2018;Systematic review and meta-analysis of the occurrence of 
                <italic toggle="yes">Listeria monocytogenes</italic> in fresh produce in selected developing countries&#x2019;. 
                <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.5281/zenodo.14224887">https://doi.org/10.5281/zenodo.14224887</ext-link> (
                <xref ref-type="bibr" rid="ref11">Fatunla and Adegoke, 2024</xref>).</p>
            <p>This dataset is licensed under the Creative Commons Zero v1.0 Universal license, allowing for sharing and adaptation with appropriate credit.</p>
        </sec>
        <sec id="sec16">
            <title>Consent to participate</title>
            <p>Not Applicable.</p>
        </sec>
        <sec id="sec17">
            <title>Consent to publish</title>
            <p>No human subjects were studied but all authors approved the submission.</p>
        </sec>
    </body>
    <back>
        <sec id="sec20" sec-type="data-availability">
            <title>Data availability statement</title>
            <p>Zenodo 
                <bold>-</bold> Systematic review and meta-analysis of the occurrence of 
                <italic toggle="yes">Listeria monocytogenes</italic> in fresh produce in selected developing countries. 
                <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.5281/zenodo.14224887">https://doi.org/10.5281/zenodo.14224887</ext-link> (
                <xref ref-type="bibr" rid="ref11">Fatunla and Adegoke, 2024</xref>).</p>
            <p>This project contains following datasets:
                <list list-type="order">
                    <list-item>
                        <label>1.</label>
                        <p>Supplementary Material 5_Listeria Review AbstractK Screening.pdf</p>
                    </list-item>
                    <list-item>
                        <label>2.</label>
                        <p>Supplementary Material 6_CRD42024521833.pdf</p>
                    </list-item>
                    <list-item>
                        <label>3.</label>
                        <p>SUPPLIMENTARY MATERIALS 4 LIST OF INCLUDED STUDIES.docx</p>
                    </list-item>
                </list>
            </p>
            <p>This dataset is licensed under the Creative Commons Zero v1.0 Universal license, allowing for sharing and adaptation with appropriate credit.</p>
        </sec>
        <ack>
            <title>Acknowledgements</title>
            <p>The authors acknowledge the Nigerian National Research Fund (NRF), University of Uyo and Durban University of Technology for their support.</p>
        </ack>
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            <title>References</title>
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