<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Publishing DTD v1.2 20190208//EN" "http://jats.nlm.nih.gov/publishing/1.2/JATS-journalpublishing1.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" article-type="research-article" dtd-version="1.2" xml:lang="en">
    <front>
        <journal-meta>
            <journal-id journal-id-type="pmc">F1000Research</journal-id>
            <journal-title-group>
                <journal-title>F1000Research</journal-title>
            </journal-title-group>
            <issn pub-type="epub">2046-1402</issn>
            <publisher>
                <publisher-name>F1000 Research Limited</publisher-name>
                <publisher-loc>London, UK</publisher-loc>
            </publisher>
        </journal-meta>
        <article-meta>
            <article-id pub-id-type="doi">10.12688/f1000research.2-182.v2</article-id>
            <article-categories>
                <subj-group subj-group-type="heading">
                    <subject>Research Article</subject>
                </subj-group>
                <subj-group>
                    <subject>Articles</subject>
                    <subj-group>
                        <subject>Behavioral Neuroscience</subject>
                    </subj-group>
                    <subj-group>
                        <subject>Neuronal Signaling Mechanisms</subject>
                    </subj-group>
                    <subj-group>
                        <subject>Neuropharmacology &amp; Psychopharmacology</subject>
                    </subj-group>
                    <subj-group>
                        <subject>Sensory Systems</subject>
                    </subj-group>
                </subj-group>
            </article-categories>
            <title-group>
                <article-title>Short- and long-term habituation of auditory event-related potentials in the rat</article-title>
                <fn-group content-type="pub-status">
                    <fn>
                        <p>[version 2; peer review: 1 approved, 2 approved with reservations]</p>
                    </fn>
                </fn-group>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author" corresp="yes">
                    <name>
                        <surname>Gurevicius</surname>
                        <given-names>Kestutis</given-names>
                    </name>
                    <xref ref-type="corresp" rid="c1">a</xref>
                    <xref ref-type="aff" rid="a1">1</xref>
                </contrib>
                <contrib contrib-type="author" corresp="yes">
                    <name>
                        <surname>Lipponen</surname>
                        <given-names>Arto</given-names>
                    </name>
                    <xref ref-type="corresp" rid="c2">b</xref>
                    <xref ref-type="aff" rid="a1">1</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Minkeviciene</surname>
                        <given-names>Rimante</given-names>
                    </name>
                    <xref ref-type="aff" rid="a1">1</xref>
                    <xref ref-type="aff" rid="a2">2</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Tanila</surname>
                        <given-names>Heikki</given-names>
                    </name>
                    <xref ref-type="aff" rid="a1">1</xref>
                    <xref ref-type="aff" rid="a3">3</xref>
                </contrib>
                <aff id="a1">
                    <label>1</label>A.I. Virtanen Institute, University of Eastern Finland, Kuopio, Finland</aff>
                <aff id="a2">
                    <label>2</label>Neuroscience Center, University of Helsinki, Helsinki, Finland</aff>
                <aff id="a3">
                    <label>3</label>Neurology, Kuopio University Hospital, Kuopio, Finland</aff>
            </contrib-group>
            <author-notes>
                <corresp id="c1">
                    <label>a</label>
                    <email xlink:href="mailto:kestutis.gurevicius@uef.fi">kestutis.gurevicius@uef.fi</email>
                </corresp>
                <corresp id="c2">
                    <label>b</label>
                    <email xlink:href="mailto:arto.lipponen@uef.fi">arto.lipponen@uef.fi</email>
                </corresp>
                <fn fn-type="con">
                    <p>K.G. and H.T. designed the experiments. K.G. analyzed the data. K.G., H.T. and A.L. wrote the paper. A.L. carried out experiments. R.M. manufactured the electrodes, implanted them and conducted the brain histology.</p>
                </fn>
                <fn fn-type="conflict">
                    <p>
                        <bold>Competing interests: </bold>The authors have no competing interests to declare.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>1</day>
                <month>5</month>
                <year>2014</year>
            </pub-date>
            <pub-date pub-type="collection">
                <year>2013</year>
            </pub-date>
            <volume>2</volume>
            <elocation-id>182</elocation-id>
            <history>
                <date date-type="accepted">
                    <day>30</day>
                    <month>4</month>
                    <year>2014</year>
                </date>
            </history>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2014 Gurevicius K et al.</copyright-statement>
                <copyright-year>2014</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/3.0/">
                    <license-p>This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <self-uri content-type="pdf" xlink:href="https://f1000research.com/articles/2-182/pdf"/>
            <abstract>
                <p>An auditory oddball paradigm in humans generates a long-duration cortical negative potential, often referred to as mismatch negativity (MMN). Both cortical and subcortical generators for MMN have been suggested, but noninvasive recordings in humans do not allow unequivocal source locations of the putative subcortical generators. Similar negativity has been documented in several animal species, thus providing interesting models to study the role and mechanisms of subcortical generators of MMN or its subcomponents. So far most of available data on rodents comes from studies during anesthesia. Therefore, we recorded cortical and hippocampal evoked responses in awake rats under a typical passive oddball paradigm that yields mismatch negativity in humans. The standard stimulus was a 9 kHz tone and the deviant either 7 or 11 kHz tone in the first condition. We found no evidence of a sustained potential shift when comparing evoked responses to standard and deviant stimuli. Instead, we found repetition-induced attenuation of the P60 component of the combined evoked response in the cortex, but not in the hippocampus. The attenuation extended over three days of recording and disappeared after 20 intervening days of rest. Reversal of the standard and deviant tones resulted is a robust enhancement of the N40 component not only in the cortex but also in the hippocampus. Responses to standard and deviant stimuli were affected similarly. Finally, we tested the effect of scopolamine in this paradigm. Scopolamine attenuated cortical N40 and P60 as well as hippocampal P60 components, but had no specific effect on the deviant response. We conclude that in an oddball paradigm the rat demonstrates repetition-induced attenuation of mid-latency responses, which resembles attenuation of the N1-component of human auditory evoked potential, but no mismatch negativity.</p>
            </abstract>
            <funding-group>
                <funding-statement>The author(s) declared that no grants were involved in supporting this work.</funding-statement>
            </funding-group>
        </article-meta>
        <notes>
            <sec sec-type="version-changes">
                <label>Revised</label>
                <title>Amendments from Version 1</title>
                <p>We thank all the reviewers for taking time to review the manuscript and make suggestions for its improvement. Based on the reviewers' comments we made the following modifications: Firstly, we rewrote the introduction to clarify the objectives of the manuscript. In particular, we now stress the necessity to develop a non-anesthetized/unrestrained animal model of mismatch negativity (MMN) and clarify role of hippocampus in the generation of MMN. Secondly, we rewrote one paragraph in the discussion to make it more consistent with the general objectives of the manuscript outlined in the introduction. We also would like to thank the reviewers for pointing out several important references, which have been added through-out the manuscript.&#x00a0; Thirdly, according to reviewers&#x2019; comments, we slightly modified Table1, and Figures 2-4. Finally, we clarified a number of small methodological details. In particular, the choice of reference and recording location, signal quality control, and the dataset used for some of the statistical comparisons.</p>
            </sec>
        </notes>
    </front>
    <body>
        <sec sec-type="intro">
            <title>Introduction</title>
            <p>The auditory oddball paradigm, in which a series of repeated standard stimuli are interrupted by occasional deviant stimuli, has been used extensively in cognitive psychology to study early stages of auditory processing in humans
                <sup>
                    <xref ref-type="bibr" rid="ref-1">1</xref>
                </sup>. Typically a sufficiently rare deviant stimulus evokes a long-duration negative potential shift beginning 100&#x2013;200 ms after the stimulus onset, referred to as mismatch negativity (MMN). MMN has been considered an electrophysiological correlate of a mismatch between the incoming stimulus and a sensory memory trace
                <sup>
                    <xref ref-type="bibr" rid="ref-2">2</xref>
                </sup>.</p>
            <p>The underlying neuronal mechanisms of MMN have been extensively studied and electrical and magnetic recordings in human subjects have localized the MMN generator to the auditory cortex
                <sup>
                    <xref ref-type="bibr" rid="ref-3">3</xref>
                </sup>, although a frontal component has also been observed
                <sup>
                    <xref ref-type="bibr" rid="ref-4">4</xref>
                </sup> (
                <italic toggle="yes">see also review</italic>
                <sup>
                    <xref ref-type="bibr" rid="ref-5">5</xref>
                </sup>). In addition, a substantial amount of animal work has contributed to our mechanistic understanding of MMN. MMN-like responses have been reported in various animal species including cats
                <sup>
                    <xref ref-type="bibr" rid="ref-6">6</xref>
                </sup>, guinea pigs
                <sup>
                    <xref ref-type="bibr" rid="ref-7">7</xref>
                </sup>, rabbits
                <sup>
                    <xref ref-type="bibr" rid="ref-8">8</xref>
                </sup>, monkeys
                <sup>
                    <xref ref-type="bibr" rid="ref-9">9</xref>
                </sup> and rats
                <sup>
                    <xref ref-type="bibr" rid="ref-10">10</xref>,
                    <xref ref-type="bibr" rid="ref-11">11</xref>
                </sup>. Interestingly, animal studies have suggested that at least in some species subcortical brain regions, thalamus
                <sup>
                    <xref ref-type="bibr" rid="ref-12">12</xref>
                </sup> and hippocampus
                <sup>
                    <xref ref-type="bibr" rid="ref-11">11</xref>&#x2013;
                    <xref ref-type="bibr" rid="ref-13">13</xref>
                </sup> might be involved in generating subcomponents of MMN. It is worth noting that hippocampus has been suggested to play a major role of detecting novelty
                <sup>
                    <xref ref-type="bibr" rid="ref-14">14</xref>,
                    <xref ref-type="bibr" rid="ref-15">15</xref>
                </sup>. In support of this, posterior hippocampal lesion dramatically reduces the novelty related cortical P3a event-related potential and autonomic skin reaction
                <sup>
                    <xref ref-type="bibr" rid="ref-16">16</xref>
                </sup>. However, it is still unclear whether MMN and P3a represent different functional outcome or whether they represent the short-term and medium-term trace of the same novelty/deviant detection mechanism
                <sup>
                    <xref ref-type="bibr" rid="ref-15">15</xref>
                </sup>. In addition, severity of Alzheimer&#x2019;s disease, and presumable the progression of hippocampal damage, is related to the MMN amplitude decrease
                <sup>
                    <xref ref-type="bibr" rid="ref-17">17</xref>
                </sup>. Nevertheless, the involvement of hippocampus in MMN is not supported by the intracranial EEG recording studies of neurological patients
                <sup>
                    <xref ref-type="bibr" rid="ref-18">18</xref>,
                    <xref ref-type="bibr" rid="ref-19">19</xref>
                </sup> although the plausible confounding effect of the neurological disorder of subjects or medication to MMN cannot be ruled out.</p>
            <p>The contribution of hippocampus to MMN has been studied in more detail in rats but only in anesthetized animals
                <sup>
                    <xref ref-type="bibr" rid="ref-11">11</xref>
                </sup> (and Ruusuvirta 
                <italic toggle="yes">et al.</italic>, submitted). Therefore, the role of anesthesia to MMN needs to be clarified. A chronic recording in non-anaesthetized animals also opens possibilities for studying the effects of neuropharmacological manipulation without confounding effects of anesthesia. In this regard, an interesting target is the basal forebrain cholinergic projection system to the hippocampus and cortex, which degenerates early on in Alzheimer's disease
                <sup>
                    <xref ref-type="bibr" rid="ref-20">20</xref>
                </sup>. Only few studies so far have investigated the effects of cholinergic drugs on MMN. Scopolamine, a centrally acting cholinergic antagonist, reduced MMN amplitude to frequency change one hour after injection in young adults
                <sup>
                    <xref ref-type="bibr" rid="ref-21">21</xref>
                </sup>, while no such change was observed in elderly subjects
                <sup>
                    <xref ref-type="bibr" rid="ref-22">22</xref>
                </sup>. However, both studies reported some modulation effects of scopolamine on P50 and P100 components.</p>
            <p>The main aim of this study was to develop a non-anesthetized rat model of cortical MMN. In addition, we wanted to clarify the putative role of the hippocampus in generation of MMN or its subcomponents in non-anesthetized rats. Second, this model allowed us to distinguish between MMN and long-term adaptation to standard auditory stimuli. Therefore, we repeated the oddball stimulus set on two daily sessions and on consecutive days to assess within-day and more long-term adaptation of the response. Finally, we wanted to elucidate the contribution of the cholinergic projection system in cortical and hippocampal MMN by the central muscarinic receptor antagonist scopolamine. We report evidence for repetition-induced attenuation of the mid-latency auditory ERPs in freely-moving rats but no correspondence to the sustained negativity around 100&#x2013;200 ms in response to the deviant sound that is referred to as MMN in humans.</p>
        </sec>
        <sec sec-type="methods">
            <title>Methods</title>
            <sec>
                <title>Animals</title>
                <p>Male Wistar rats (Laboratory Animal Center, University of Eastern Finland, Kuopio, Finland, n=12, weight 412 &#x00b1; 9 g) were reared in groups of 2&#x2013;4 until 5 months of age and individually thereafter in a controlled environment (temperature +21&#x00b0;C, lights on from 7:00 h to 19:00 h, water and food available ad libitum) Animals were housed in stainless steel metal cages, floor 31 cm &#x00d7; 45 cm, height 18 cm according to the guidelines of the Council of Europe ETS123. At the age of 5&#x2013;6 months, the rats were chronically implanted with two recording electrodes made of 50 &#x03bc;m insulated stainless steel wire (California Fine Wire Company Co, Grover Beach, CA, USA) in the hippocampus at the following stereotactic coordinates: AP (from Bregma) - 3.8, L (from Bregma) +3.1, V (from brain surface) - 3.1 with a vertical separation of the tips of 0.6 mm. In addition, two cortical screw electrodes (Wurth Electronics, Finland) were fixed on the (left and right) parietal bones (L &#x00b1; 2.0 mm and A -7.5 mm from Bregma). A frontal screw was selected as the ground and a common reference electrode because in our previous unpublished studies the prelimbic or infralimbic cortices did not show AEP or MMN components in rats. The hippocampal electrode closest to the pyramidal cell layer (based on histological and electrophysiological markers) and the right parietal cortical electrode were selected for the final analysis of evoked potentials. The location of the parietal screw electrode was chosen based on our pilot studies such that it picks up the maximum AEP amplitude. This electrode location allowed us to indirectly record auditory cortical response while avoiding severe damage of large temporal muscles attached to the skull above the auditory cortex in the rats. The rats were anesthetized with a mixture of pentobarbital and chloral hydrate (40 mg/kg i.p. each), and, for post-operative analgesia, they received 5 mg/kg of carprofen (Rimadyl
                    <sup>&#x00ae;</sup>, Vericore, Dundee, UK) intraperitoneally. The rats were housed in individual cages after the surgery. Recordings started after at least 2 weeks of recovery period. Before the present series of experiments the rats participated in a pharmacological EEG study and thus had been extensively handled. Care was taken to have a washout period of at least three weeks before the current study on AEPs. All animal procedures were carried out in accordance with the guidelines of the European Community Council Directives 86/609/EEC and approved by the State Provincial Office of Eastern Finland.</p>
            </sec>
            <sec>
                <title>Data acquisition</title>
                <p>In total 10 rats were recorded for the study but due to poor signal (i.e. bad electrode contact) in some channels, the number of recorded animals in the analysis varied from 6 to 9. During the recordings the rat was able to freely move in a brown paste-board cylinder (70 cm diameter, 50 cm height) that was highly familiar to the rat due to previous EEG recordings. Two conventional speakers were placed on the opposite sides outside the cylinder. Auditory stimuli were created through a computer sound card (Sound Blaster 16, Creative Technology Ltd, Singapore, Singapore) and included pure sinusoidal tones of 7, 9 or 11 kHz pitch (tone duration 150 ms, 70 dB, rise/fall time 5 ms). The signal was analog filtered for the 1&#x2013;1000 Hz band, amplified (&#x00d7; 1000&#x2013;5000), and digitized at 2 kHz per channel for further processing using a commercial software (Experimenter&#x2019;s Workbench, DataWave Technologies, Longmont, CO, USA).</p>
                <p>At the end of the experiment, the rats were euthanized by an overdose of pentobarbital and chloral hydrate (each 80 mg/kg i.p.) and the sites of the electrode tips were marked by passing a 30 &#x03bc;A anodal current for 5 s through each hippocampal electrode. Subsequently, the brains were immersion-fixed overnight with 4% formalin solution (Sigma-Aldrich) and sectioned at 50 &#x03bc;m with a vibratome (Leica VT1000s). The sites of the electrolytic lesions were verified in sections stained with cresyl violet Sigma-Aldrich) by using a light Olympus CX microscope 
                    <xref ref-type="fig" rid="f1">Figure 1</xref>.</p>
                <fig fig-type="figure" id="f1" orientation="portrait" position="float">
                    <label>Figure 1. </label>
                    <caption>
                        <title>Histological verification of the electrode placement in the hippocampus.</title>
                        <p>The arrows point to the lesion marks corresponding to the two electrode tips, the upper one in the alveus/oriens and the deeper one in the hippocampal fissure. Scale bar = 2000 &#x03bc;m.</p>
                    </caption>
                    <graphic orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/4387/115f068c-e3c6-4d47-83d4-f8b59d011b94_figure1.gif"/>
                </fig>
            </sec>
            <sec>
                <title>Study design</title>
                <p>The basic study protocol was a conventional mismatch (or oddball) paradigm consisting of one standard tone and one or two deviant tones. Under most conditions, the standard was 9 kHz and the deviants were 7 and 11 kHz tones. Both a low and a high deviant were used to exclude the contribution of tonotopy to auditory evoked potential (AEP) amplitudes. Every run consisted of 400 repetitions with a 1-s inter-stimulus interval. The three tones (7, 9 and 11 kHz) were presented in a pseudo-random order, so that the proportions of the standard, deviant 1 and deviant 2 tones were 85%, 7.5% and 7.5%, respectively.</p>
                <p>Experiment 1 consisted of three consecutive days with the 9 kHz tone as the standard, and 7 and 11 kHz tones as the deviants. Similar recordings were performed during Experiment 2 (three weeks after Experiment 1) that also consisted of three consecutive runs. Day 1 replicated Day 1 of the Experiment 1, and was followed by a similar run on Day 2. In addition, Day 2 included a second run with the mismatch contingency reversed, so that 7 kHz became the standard and 9 kHz the deviant. Experiment 3 (one week later) included pharmacological manipulations and consisted only of two runs, one on Day 1 and the second on Day 4. In the first run the standard tone was 9 kHz and the deviants 7 and 11 kHz. In the second run the standard tone was 7 kHz and the deviant 9 kHz. Four rats received scopolamine (0.2 mg/kg, s.c.; Sigma-Aldrich) 20 min before the first run, and five rats before the second run. Saline was used as control treatment.</p>
            </sec>
            <sec>
                <title>Data analysis</title>
                <p>First, all signals were corrected for amplification. Waveform averaging and AEP peak detection were conducted by custom made routines in Visual Basic under Microsoft Excel
                    <sup>&#x00ae;</sup> (version 2002).</p>
                <p>The AEP in a typical rat had three middle-latency components, N40, P60 and P110 (N40 means a negative deflection at 40 ms). In addition, these components were followed by a broad negativity from 150 ms to 250 ms after the stimulus onset (
                    <xref ref-type="fig" rid="f2">Figure 2A, B</xref>). The amplitude of these components was calculated as a maximum deviation from the baseline. The baseline was calculated for each rat from the averaged response between 0 and 100 ms before stimulus onset. When calculating mismatch effect between standard and deviant AEP, we focused on the middle-latency components only (N40, P60 and P110).</p>
                <fig fig-type="figure" id="f2" orientation="portrait" position="float">
                    <label>Figure 2. </label>
                    <caption>
                        <title>Representative examples of averaged AEPs obtained in the auditory oddball paradigm (grand average of the Day 1 in Experiment 1).</title>
                        <p>Cortical (
                            <bold>A</bold>) and hippocampal (
                            <bold>B</bold>) AEPs. The thin line denotes the response to the deviant tone and the thick line the response to the standard tone. The triangle marks the tone onset. The horizontal bar corresponds to 100 ms, the vertical bar to 0.04 mV (scale for the cortex is five times smaller than that for the hippocampus). Negativity is downward.</p>
                    </caption>
                    <graphic orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/4387/115f068c-e3c6-4d47-83d4-f8b59d011b94_figure2.gif"/>
                </fig>
                <p>The statistical analysis was conducted by using SPSS for Windows 11.5 software. The standard and deviant responses were compared within-subjects using ANOVA with repeated measures with the run (1&#x2013;3) or drug (placebo or scopolamine) as additional within-subject factors. The threshold for significance was set to p &lt; 0.05.</p>
            </sec>
        </sec>
        <sec sec-type="results">
            <title>Results</title>
            <sec>
                <title>Electrode location</title>
                <p>Histology verified the location of the hippocampal electrodes in the intended layers: the top electrode in the stratum pyramidale &#x2013; stratum radiatum and the deeper one in the hippocampal fissure &#x2013; outer molecular layer of the dentate gyrus. The typical location of the hippocampal electrodes is illustrated in 
                    <xref ref-type="fig" rid="f1">Figure 1</xref>.</p>
            </sec>
            <sec>
                <title>AEP components</title>
                <p>Representative examples of an averaged cortical and hippocampal AEPs obtained in the auditory mismatch paradigm are shown in 
                    <xref ref-type="fig" rid="f2">Figure 2</xref>. The components N40, P60 and P110 were identified for each rat and pooled for standards and deviants for all drug-free days. The exact latencies of these components are summarized in 
                    <xref ref-type="table" rid="T1">Table 1</xref> and their mutual correlations in 
                    <xref ref-type="table" rid="T2">Table 2</xref>. The mutual Pearson correlation coefficients were high and significant for all components of the hippocampal response (if the absolute value of one component grows there is a high probability that other components will also grow). This suggests that physiological sources of AEP components are not completely independent. On the other hand, only the mutual correlations of the P60&#x2013;P110 components in the cortical response reached a comparable significance level. Furthermore, neither cortical P60 nor P110 correlated with any hippocampal component, which suggests that the cortical and hippocampal responses are largely independent, with the exception of the early N40 component.</p>
                <table-wrap id="T1" orientation="portrait" position="anchor">
                    <label>Table 1. </label>
                    <caption>
                        <title>Latencies for defined mid-latency components in [ms] (combined three days of Experiment 1).</title>
                    </caption>
                    <table content-type="article-table" frame="hsides">
                        <thead>
                            <tr>
                                <th colspan="1" rowspan="1"/>
                                <th align="left" colspan="2" rowspan="1">CORTEX</th>
                                <th colspan="1" rowspan="1">n = 26</th>
                                <th colspan="1" rowspan="1"/>
                                <th align="left" colspan="2" rowspan="1">HIPPOCAMPUS</th>
                                <th colspan="1" rowspan="1">n = 20</th>
                            </tr>
                        </thead>
                        <tbody>
                            <tr>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1">N40</td>
                                <td colspan="1" rowspan="1">P60</td>
                                <td colspan="1" rowspan="1">P110</td>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1">N40</td>
                                <td colspan="1" rowspan="1">P60</td>
                                <td colspan="1" rowspan="1">P110</td>
                            </tr>
                            <tr>
                                <td colspan="1" rowspan="1">Mean Latency
                                    <break/>Sem</td>
                                <td colspan="1" rowspan="1">44.42
                                    <break/>0.68</td>
                                <td colspan="1" rowspan="1">70.82
                                    <break/>1.04</td>
                                <td colspan="1" rowspan="1">98.26
                                    <break/>0.93</td>
                                <td colspan="1" rowspan="1">DEV
                                    <break/>
                                    <break/>
                                </td>
                                <td colspan="1" rowspan="1">44.11
                                    <break/>0.39</td>
                                <td colspan="1" rowspan="1">66.72
                                    <break/>1.27</td>
                                <td colspan="1" rowspan="1">103.37
                                    <break/>0.49</td>
                            </tr>
                            <tr>
                                <td colspan="1" rowspan="1">Mean Latency
                                    <break/>Sem</td>
                                <td colspan="1" rowspan="1">43.32
                                    <break/>0.81</td>
                                <td colspan="1" rowspan="1">69.84
                                    <break/>1.11</td>
                                <td colspan="1" rowspan="1">98.20
                                    <break/>0.70</td>
                                <td colspan="1" rowspan="1">STD
                                    <break/>
                                    <break/>
                                </td>
                                <td colspan="1" rowspan="1">43.50
                                    <break/>0.34</td>
                                <td colspan="1" rowspan="1">65.96
                                    <break/>1.33</td>
                                <td colspan="1" rowspan="1">103.35
                                    <break/>0.40</td>
                            </tr>
                        </tbody>
                    </table>
                </table-wrap>
                <table-wrap id="T2" orientation="portrait" position="anchor">
                    <label>Table 2. </label>
                    <caption>
                        <title>The correlation matrix for middle-latency components (pooled data from Experiment 1 &amp; 2).</title>
                    </caption>
                    <table content-type="article-table" frame="hsides">
                        <thead>
                            <tr>
                                <th colspan="1" rowspan="1"/>
                                <th colspan="1" rowspan="1"/>
                                <th align="left" colspan="1" rowspan="1">N40
                                    <break/>CTX</th>
                                <th align="left" colspan="1" rowspan="1">P60
                                    <break/>CTX</th>
                                <th align="left" colspan="1" rowspan="1">P110
                                    <break/>CTX</th>
                                <th align="left" colspan="1" rowspan="1">N40
                                    <break/>HIPP</th>
                                <th align="left" colspan="1" rowspan="1">P60
                                    <break/>HIPP</th>
                                <th align="left" colspan="1" rowspan="1">P110
                                    <break/>HIPP</th>
                            </tr>
                        </thead>
                        <tbody>
                            <tr>
                                <td colspan="1" rowspan="1" valign="top">N40
                                    <break/>CTX</td>
                                <td colspan="1" rowspan="1">Pearson Correlation
                                    <break/>Sig. (2-tailed)
                                    <break/>N</td>
                                <td colspan="1" rowspan="1">1
                                    <break/>.
                                    <break/>94</td>
                                <td colspan="1" rowspan="1">0.04
                                    <break/>0.667
                                    <break/>94</td>
                                <td colspan="1" rowspan="1">-0.15
                                    <break/>0.141
                                    <break/>94</td>
                                <td colspan="1" rowspan="1">0.26*
                                    <break/>0.024
                                    <break/>76</td>
                                <td colspan="1" rowspan="1">0.02
                                    <break/>0.851
                                    <break/>76</td>
                                <td colspan="1" rowspan="1">-0.35**
                                    <break/>0.002
                                    <break/>76</td>
                            </tr>
                            <tr>
                                <td colspan="1" rowspan="1" valign="top">P60
                                    <break/>CTX</td>
                                <td colspan="1" rowspan="1">Pearson Correlation
                                    <break/>Sig. (2-tailed)
                                    <break/>N</td>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1">1
                                    <break/>.
                                    <break/>94</td>
                                <td colspan="1" rowspan="1">0.41**
                                    <break/>0.000
                                    <break/>94</td>
                                <td colspan="1" rowspan="1">0.16
                                    <break/>0.172
                                    <break/>76</td>
                                <td colspan="1" rowspan="1">0.00
                                    <break/>1.000
                                    <break/>76</td>
                                <td colspan="1" rowspan="1">0.17
                                    <break/>0.143
                                    <break/>76</td>
                            </tr>
                            <tr>
                                <td colspan="1" rowspan="1" valign="top">P110
                                    <break/>CTX</td>
                                <td colspan="1" rowspan="1">Pearson Correlation
                                    <break/>Sig. (2-tailed)
                                    <break/>N</td>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1">1
                                    <break/>.
                                    <break/>94</td>
                                <td colspan="1" rowspan="1">0.32**
                                    <break/>0.004
                                    <break/>76</td>
                                <td colspan="1" rowspan="1">-0.17
                                    <break/>0.139
                                    <break/>76</td>
                                <td colspan="1" rowspan="1">-0.02
                                    <break/>0.876
                                    <break/>76</td>
                            </tr>
                            <tr>
                                <td colspan="1" rowspan="1" valign="top">N40
                                    <break/>HIPP</td>
                                <td colspan="1" rowspan="1">Pearson Correlation
                                    <break/>Sig. (2-tailed)
                                    <break/>N</td>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1">1
                                    <break/>.
                                    <break/>76</td>
                                <td colspan="1" rowspan="1">-0.58**
                                    <break/>0.000
                                    <break/>76</td>
                                <td colspan="1" rowspan="1">-0.39**
                                    <break/>0.001
                                    <break/>76</td>
                            </tr>
                            <tr>
                                <td colspan="1" rowspan="1" valign="top">P60
                                    <break/>HIPP</td>
                                <td colspan="1" rowspan="1">Pearson Correlation
                                    <break/>Sig. (2-tailed)
                                    <break/>N</td>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1">1
                                    <break/>.
                                    <break/>76</td>
                                <td colspan="1" rowspan="1">0.54**
                                    <break/>0.000
                                    <break/>76</td>
                            </tr>
                            <tr>
                                <td colspan="1" rowspan="1" valign="top">P110
                                    <break/>HIPP</td>
                                <td colspan="1" rowspan="1">Pearson Correlation
                                    <break/>Sig. (2-tailed)
                                    <break/>N</td>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1">1
                                    <break/>.
                                    <break/>76</td>
                            </tr>
                        </tbody>
                    </table>
                    <table-wrap-foot>
                        <fn>
                            <p>* Correlation is significant at the 0.05 level (2-tailed).</p>
                        </fn>
                        <fn>
                            <p>** Correlation is significant at the 0.01 level (2-tailed).</p>
                        </fn>
                    </table-wrap-foot>
                </table-wrap>
            </sec>
            <sec>
                <title>Increased cortical response to the deviant tone</title>
                <p>The overall analysis of all three days of Experiment 1 revealed larger cortical responses to the deviant tone compared to the standard tone (
                    <xref ref-type="fig" rid="f2">Figure 2A</xref>, and 
                    <xref ref-type="fig" rid="f3">Figure 3</xref>). The difference was significant for N40 [F(1,7) = 7.7, p = 0.03] and P60 (p = 0.04) components and approached significance for P110 (p = 0.06). However, the shape of the average evoked response remained the same, and there was no evidence for the typical mismatch negativity as reported in human studies
                    <sup>
                        <xref ref-type="bibr" rid="ref-2">2</xref>
                    </sup>. In contrast, the hippocampal response did not differentiate between the standard and the deviant tones (p &#x2265; 0.10 for all components). Together with the correlation table (
                    <xref ref-type="table" rid="T2">Table 2</xref>) this finding speaks against the notion that the cortical response is a simple volume conducted signal from the hippocampus.</p>
                <fig fig-type="figure" id="f3" orientation="portrait" position="float">
                    <label>Figure 3. </label>
                    <caption>
                        <title>Effect of repetition on the AEP in response to the standard and the deviant tones.</title>
                        <p>Mean amplitudes of AEP components (N40, P60, P110) &#x00b1; SEMs are given. In each chart the x-axis represent different runs of the test. Note the break between Run 3 of Experiment 1 and Run 1 of Experiment 2 to indicate the intervening days.</p>
                        <p>R under Run 3 of Experiment 2 indicates reversal of the mismatch contingency.</p>
                        <p>* significant difference between consecutive Runs;</p>
                        <p>&#x00a4; significant difference between Run 3 of Experiment 1 and Run 1 of Experiment 2;</p>
                        <p># significant difference between standard and deviant responses;</p>
                        <p>&amp; significant repetition effect on component attenuation.</p>
                    </caption>
                    <graphic orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/4387/115f068c-e3c6-4d47-83d4-f8b59d011b94_figure3.gif"/>
                </fig>
            </sec>
            <sec>
                <title>Repetition effect on the responses</title>
                <p>The amplitude of cortical N40 response was relatively stable in Experiment 1, but the P60 component attenuated significantly between days [F(2,6) = 5.9, p = 0.04], and the P110 showed a similar, but non-significant trend [F(2,6) = 1.9, p = 0.24]. This trend could be observed for both standard and deviant tones (
                    <xref ref-type="fig" rid="f3">Figure 3</xref>). In contrast, none of the hippocampal components attenuated between days (all p values &gt; 0.40).</p>
                <p>The time dependency of AEP attenuation was further investigated in Experiment 2. First, we replicated the standard mismatch condition after 20 intervening days of rest. The cortical response to the standard tones reached the original (or higher) amplitude of Day 1 in Experiment 1 (
                    <xref ref-type="fig" rid="f3">Figure 3</xref>). The ANOVA for repeated measures revealed significant enhancement of cortical P60 [F(1,6) = 12.9, p = 0.01] and P110 (p = 0.03) components between Day 3 of Experiment 1 and Day 1 of Experiment 2. Interestingly, these were the same components that were also attenuated over three daily sessions in Experiment 1. Although a similar trend was observed in the N40 component in some animals, the difference did not reach significance at the group level (p &gt; 0.15). The response enhancement after 20 intervening days could be observed to some extent for both standard and deviant stimulus (
                    <xref ref-type="fig" rid="f3">Figure 3</xref>). In contrast, hippocampal responses, which did not change significantly over the three days of Experiment 1, did not increase after the 20 intervening days of rest, either (all p &gt; 0.35).</p>
                <p>Next, we repeated the same mismatch condition on Day 2 of Experiment 2 to see whether this habituation of responses between days could be replicated. This time we saw an attenuation of cortical N40 [F(1,6) = 8.6, p = 0.03] and P60 [F(1,6) = 20.0, p = 0.004] components; and a similar, but not significant trend of P110 component [F(1,6) = 1.7, p = 0.24] (
                    <xref ref-type="fig" rid="f3">Figure 3</xref>). In addition, habituation of hippocampal N40 reached significance [F(1,5) = 12.9, p = 0.02]. Again habituation was similar for the standard and deviant responses. Furthermore, the difference between AEPs to the standard and deviant tones could be replicated. However, this time the most robust oddball effect was observed for cortical P110 [F(1,6) = 29.3, p = 0.002], while P60 showed only a trend (p = 0.07), and N40 no effect (p &gt; 0.30). Unlike in Experiment 1, the hippocampal P60 component showed a clear oddball effect [F(1,5) = 15.2, p = 0.01].</p>
                <p>Finally, we reversed the mismatch contingency on the second run of Day 2. The reversal resulted in a robust enhancement of both cortical [F(1,6) = 12.2, p = 0.01] and hippocampal N40 [F(1,5) = 28.7, p = 0.003] components, which increased even above the Day 1 (of Experiment 2) level (
                    <xref ref-type="fig" rid="f3">Figure 3</xref>). This change was observed for both the standard and deviant tones. No other cortical or hippocampal components were enhanced after the reversal (all p &gt; 0.14), but the reversal removed the oddball effect for hippocampal P60 and cortical P110 components (
                    <xref ref-type="fig" rid="f3">Figure 3</xref>).</p>
            </sec>
            <sec>
                <title>Scopolamine effect on the middle-latency components</title>
                <p>Muscarinic receptors in the central nervous system (CNS) play an important role in the regulation of arousal, attention and synaptic plasticity
                    <sup>
                        <xref ref-type="bibr" rid="ref-23">23</xref>,
                        <xref ref-type="bibr" rid="ref-24">24</xref>
                    </sup>. To test the contribution of muscarinic receptors on the mismatch effect, we used the subtype nonspecific muscarinic antagonist, scopolamine
                    <sup>
                        <xref ref-type="bibr" rid="ref-25">25</xref>
                    </sup>, in Experiment 3.</p>
                <p>Scopolamine resulted in general attenuation of the cortical response, with significant effects in the N40 and P60 components (
                    <xref ref-type="fig" rid="f4">Figure 4</xref>; p = 0.03 and p = 0.04, respectively). In the hippocampal response, only the P60 component decreased significantly (p = 0.002). In Experiment 3, differences were no longer detected between the responses to the standard and deviant sounds for any of the cortical or hippocampal components. Furthermore, the effect of scopolamine did not differ for the standard vs. deviant response (for all sound &#x00d7; drug interactions p &gt; 0.45).</p>
                <fig fig-type="figure" id="f4" orientation="portrait" position="float">
                    <label>Figure 4. </label>
                    <caption>
                        <title>Scopolamine effect on cortical and hippocampus AEPs.</title>
                        <p>Representative example obtained from one rat in the auditory oddball paradigm. The thin line indicates the response to the deviant tone and the thick line the response to the standard tone. The triangle marks the tone onset. Horizontal bar corresponds to 100 ms, vertical bar to 0.04 mV (cortical scale is 5.7 times smaller than that for the hippocampus). Negativity is downward.</p>
                        <p>* significant difference between scopolamine and saline runs.</p>
                    </caption>
                    <graphic orientation="portrait" position="float" xlink:href="https://f1000research-files.f1000.com/manuscripts/4387/115f068c-e3c6-4d47-83d4-f8b59d011b94_figure4.gif"/>
                </fig>
                <media content-type="figshare" orientation="portrait" position="float" xlink:href="http://dx.doi.org/10.6084/m9.figshare.785757"/>
            </sec>
        </sec>
        <sec sec-type="discussion">
            <title>Discussion</title>
            <p>Mismatch negativity (MMN) is a well established phenomenon in humans and widely studied within the field of cognitive neuroscience and psychology. Numerous studies have verified that MMN or MMN-like phenomena also exists in different animal species
                <sup>
                    <xref ref-type="bibr" rid="ref-6">6</xref>&#x2013;
                    <xref ref-type="bibr" rid="ref-11">11</xref>
                </sup> and some of these studies have implicated a role of subcortical structures in generating MMN or subcomponents of MMN. However, earlier studies in rats have been conducted in anesthesia, which may seriously confound the results. The present study in awake, freely moving rodents found evidence for repetition-induced attenuation of the mid-latency auditory ERPs (in cortex and hippocampus) but no correspondence to the sustained negativity around 100&#x2013;200 ms in response to the deviant sound that is referred to as MMN in humans.</p>
            <p>The sensitivity of the rat auditory system as a function of stimulus frequency is very different from that of humans. The human auditory system is sensitive to frequencies from about 20 Hz to a maximum of around 20,000 Hz, with a peak sensitivity between 2 and 5 kHz. In contrast, in rats the auditory evoked potential increases in amplitude from 2 to 8 kHz reaching a plateau until 20 kHz
                <sup>
                    <xref ref-type="bibr" rid="ref-26">26</xref>
                </sup>. Therefore, having the deviant sounds higher than the standards can yield a false impression of MMN. This possibility was excluded in the present study by using a balanced number of higher and lower deviants and averaging their responses when comparing them to the standard. Nevertheless, the cortical ERPs in Experiment 1 had higher amplitudes in response to the deviant than the standard tones. Notably, the overall shape of the ERP did not change, and we found no evidence for a sustained shift &#x2013; whether negative of positive &#x2013; that would resemble the human MMN. Interestingly, no augmentation of the ERP to the deviant tone was observed in the hippocampus.</p>
            <p>Whereas the number of high vs. low deviants was balanced in the present study, the standard and deviant responses differed in an important parameter, the repetition rate. The standard was presented at the proportion of 85%, while each deviant was presented only at 7.5%. One of the studies in anesthetized rats
                <sup>
                    <xref ref-type="bibr" rid="ref-27">27</xref>
                </sup> reported augmented responses to deviant sounds, which the authors interpreted in terms of repetition rate. In the present study, the cortical ERPs gradually decreased over three daily sessions (Experiment 1) and returned to the original levels after a three-week break between Experiments 1 and 2. The decrement of ERP from session to session was again replicated in Experiment 2. Notably, this decrement in ERP amplitude was roughly the same for the standard- and deviant-evoked responses. The most parsimonious interpretation to these findings is that both the response enhancement to deviant stimuli and general ERP decrement over time reflect gradual attenuation of auditory ERPs to stimulus repetition. This interpretation is also consistent with the disappearance of all differences between standard- vs. deviant-evoked responses after the standard and deviant stimuli were reversed. Namely, after the reversal the cumulative number of the former deviant stimuli soon approached that of the standard for that session. Thus our findings largely support the conclusion of Lazar and Metherate
                <sup>
                    <xref ref-type="bibr" rid="ref-27">27</xref>
                </sup> that the enhanced response to the deviant sound in an oddball paradigm can be attributed to differences in repetition rate.</p>
            <p>Some of the present findings, however, cannot be explained by differences in repetition rate. First, after reversal of the task contingency, the N40 responses (for both the standard and the deviant tone) increased markedly in amplitude. A change in repetition rate could explain why the responses increased to the 9 kHz stimulus, the former standard that now became the deviant (proportion change from 85% to 15%, as only one deviant was used in this part of the experiment). However, this enhancement was also found for the 7 kHz stimulus that became much more frequent (7.5% vs. 85%). Moreover, the enhancement could be observed not only in the cortical channel that was sensitive to the repetition rate, but also in the hippocampus. A similar response to the reversal in the cortex and hippocampus may reflect general arousal or response enhancement in the thalamus or brainstem. A second finding that is at odds with the repetition rate hypothesis was the enhanced deviant-evoked hippocampal P60 and cortical P110 responses. It is possible that these changes after a three-week break in the experiment reflect a &#x2018;declarative&#x2019; kind of memory recall as opposed to gradual response attenuation as a function of stimulus presentation. This finding warrants further studies.</p>
            <p>Overall, our conclusion is that no auditory MMN exists in awake rats in contrasts with other studies conducted in anesthetized rats
                <sup>
                    <xref ref-type="bibr" rid="ref-10">10</xref>,
                    <xref ref-type="bibr" rid="ref-11">11</xref>,
                    <xref ref-type="bibr" rid="ref-28">28</xref>
                </sup> or with non-anesthetized mice
                <sup>
                    <xref ref-type="bibr" rid="ref-29">29</xref>
                </sup>. The discrepancy between the results on non-anesthetized and anesthetized rats can be ascribed to the confounding effect of anesthesia on neuronal functions, as evidenced in a human anesthesia study
                <sup>
                    <xref ref-type="bibr" rid="ref-30">30</xref>
                </sup>. Although Umbricht and coworkers
                <sup>
                    <xref ref-type="bibr" rid="ref-29">29</xref>
                </sup> were able to show MMN-like activity to duration deviants in mice, they could not rule out the possibility that the MMN-like response emerged due to both duration and intensity changes. However, in the same study frequency deviants yielded similar ERPs as the standard stimuli, which is in line with findings our current study.</p>
            <p>Due to lack of MMN-like response in our study we can provide only limited remarks on the role of cholinergic system in cortical and hippocampal MMN. However, we can conclude that blocking the central cholinergic muscarinic receptors with scopolamine has a clear attenuating effect on cortical N40 and P60, and on hippocampal P60 components. Previous studies with human subjects have shown that scopolamine modulates cortical P50 and N100 components. In a MEG study of healthy subjects scopolamine increased P50 amplitude and delayed N100
                <sup>
                    <xref ref-type="bibr" rid="ref-21">21</xref>
                </sup> whereas in combined MEG and EEG study of elderly subjects scopolamine delayed P50 and N100 responses
                <sup>
                    <xref ref-type="bibr" rid="ref-22">22</xref>
                </sup>. However, P
                <sub>a</sub> and N
                <sub>b</sub> (peaking approximately 30 ms and 45 ms from stimulus onset, respectively) are augmented after administration of scopolamine
                <sup>
                    <xref ref-type="bibr" rid="ref-31">31</xref>
                </sup>. Because of the diversity of these findings we can conclude that we were able to replicate the modulation of auditory ERP by scopolamine, but determination of direction of the effects needs further studies. Thus the rat provides a model to study neuropharmacological regulation of the human N1-component, but other animal models need to be employed for the modeling of human MMN.</p>
        </sec>
    </body>
    <back>
        <ack>
            <title>Acknowledgements</title>
            <p>We thank Dr. M. Penttonen for constructive comments on the manuscript.</p>
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                    <article-title>Sequential effects of increasing propofol sedation on frontal and temporal cortices as indexed by auditory event-related potentials.</article-title>
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                    <article-title>Scopolamine enhances middle-latency auditory evoked magnetic fields.</article-title>
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        </ref-list>
    </back>
    <sub-article article-type="reviewer-report" id="report4615">
        <front-stub>
            <article-id pub-id-type="doi">10.5256/f1000research.4387.r4615</article-id>
            <title-group>
                <article-title>Reviewer response for version 2</article-title>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author">
                    <name>
                        <surname>Rosburg</surname>
                        <given-names>Timm</given-names>
                    </name>
                    <xref ref-type="aff" rid="r4615a1">1</xref>
                    <role>Referee</role>
                </contrib>
                <aff id="r4615a1">
                    <label>1</label>Experimental Neuropsychology Unit, Department of Psychology, Saarland University, Saarbr&#x00fc;cken, Germany</aff>
            </contrib-group>
            <author-notes>
                <fn fn-type="conflict">
                    <p>
                        <bold>Competing interests: </bold>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>30</day>
                <month>6</month>
                <year>2014</year>
            </pub-date>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2014 Rosburg T</copyright-statement>
                <copyright-year>2014</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access peer review report distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <related-article ext-link-type="doi" id="relatedArticleReport4615" related-article-type="peer-reviewed-article" xlink:href="10.12688/f1000research.2-182.v2"/>
            <custom-meta-group>
                <custom-meta>
                    <meta-name>recommendation</meta-name>
                    <meta-value>approve-with-reservations</meta-value>
                </custom-meta>
            </custom-meta-group>
        </front-stub>
        <body>
            <p>Gurevicius and colleagues provided a revised version of their study, but I consider the improvements as marginal and, unfortunately, many issues I raised in my previous review have not been addressed. Furthermore, an inspection of the submitted data file revealed some inconsistencies with the reported statistics.</p>
            <p>Gurevicius and colleagues make two claims: (1), there is no evidence for an MMN in the hippocampus of the rat. (2), there is a &#x2018;long-term habituation&#x2019; effect of the cortical P60 component. However, there is a considerable lack of transparency in the data presentation; on the basis of the provided information, the reader cannot fully evaluate the reported results.
                <list list-type="order">
                    <list-item>
                        <p>Figure 2 has now been re-labelled, as showing grand average data from Day 1. At the same time, the graphs are still labelled as &#x2018;representative examples&#x2019;. This is not as clear as it should be. First, it is not clear what is meant by &#x2018;representative&#x2019;. Second, grand average data should not be called &#x2018;examples&#x2019;. Moreover, in Figure 2 the absolute amplitudes of the cortical P60 are larger than the absolute amplitudes of the cortical N40. This is somewhat in contrast to Figure 3 that shows similar absolute amplitudes for the two components. Finally, given the significant difference in the hippocampal P60 between standards and deviants, grand average data of Experiment 2 need to be depicted, as previously requested.</p>
                    </list-item>
                    <list-item>
                        <p>The authors do not describe how artefacts were identified and on what basis data were excluded. It is insufficient to state that data were excluded due to a &#x201c;
                            <italic>poor signal (i.e. bad electrode contact)</italic>&#x201d;. Such a description hinders any replication of the study.</p>
                    </list-item>
                    <list-item>
                        <p>It is still not fully clear what reference electrode was used. The authors state a &#x201c;
                            <italic>common reference electrode</italic>&#x201d; was used but they do not describe which electrodes were used for calculating it.</p>
                    </list-item>
                    <list-item>
                        <p>As also previously criticized by other reviewers, the description of the conducted statistics is incomplete with some F values missing, but there are some inconsistencies as well.</p>
                        <p>(a), Table 1 implies that one data point each was excluded from the analysis of Experiment 1. However, the submitted data file does not contain missing values. Consequently, the data file is hardly suited to reproduce the study results.</p>
                        <p>(b), it is also worth noting that the algebraic signs are reversed in this data file (with positive values for the N40 and negative for the P60 and P110 amplitude values).</p>
                        <p>(c), furthermore, attempts to reproduce the study results are hampered by the fact that sometimes the degrees of freedom are incorrectly reported (in particular for the repetition effects). Moreover, for the repetition effects, it is unclear whether the reported results of the ANOVA were Greenhouse-Geisser corrected when necessary. This needs to be indicated. - When I re-calculated the repetition effect of the cortical P60 in an ANOVA with Day (Day 1 vs. Day 2 vs. Day 3) and ODDBALL (standards vs. deviants) as within-subjects factors with the provided data, I revealed an insignificant main effect of DAY [F (2, 16) = 3.451, p = 0.094 after Greenhouse-Geisser correction, epsilon = 0.556].</p>
                    </list-item>
                    <list-item>
                        <p>As previously mentioned, the concepts of &#x2018;long-term habituation&#x2019;, &#x2018;short-term habituation&#x2019; and &#x2018;long-term adaptation&#x2019; are poorly described and no explicit operational definitions are provided. On the basis of previous 'long-term habituation' studies in humans, I would not expect to see response decrements from day to day but within each experimental day (i.e. within an experimental session); on the basis of the provided data, I am little convinced that there were actually any substantial response decrements from day to day in Experiment 1 (see comment point 4 c).</p>
                    </list-item>
                    <list-item>
                        <p>The authors argue that the contrast between the present and previous studies &#x201c;
                            <italic>can be ascribed to the confounding effect of anesthesia on neuronal functions, as evidenced in a human anesthesia study</italic>&#x201d;. This is not particularly convincing since the cited study of Heinke 
                            <italic>et al.</italic> (2004) showed that the human MMN is diminished by anesthesia rather than the other way around. Moreover, the authors claim in the Introduction that the "
                            <italic>severity of Alzheimer&#x2019;s disease, and presumable the progression of hippocampal damage, is related to the MMN amplitude decrement</italic>", referring to the study of Pekkonen 
                            <italic>et al.</italic> (1994). However, the severity of Alzheimer&#x2019;s disease and the progression of hippocampal damage were not related to the MMN amplitude decrement in this study.</p>
                    </list-item>
                    <list-item>
                        <p>The authors need to clarify to what data the correlation matrix in Table 2 refers to, as previously noted.</p>
                    </list-item>
                    <list-item>
                        <p>The title of the study needs to be re-considered, as previously outlined.</p>
                    </list-item>
                </list>
            </p>
            <p>Reviewer Expertise:</p>
            <p>NA</p>
            <p>I confirm that I have read this submission and believe that I have an appropriate level of expertise to confirm that it is of an acceptable scientific standard, however I have significant reservations, as outlined above.</p>
        </body>
        <sub-article article-type="response" id="comment940-4615">
            <front-stub>
                <contrib-group>
                    <contrib contrib-type="author">
                        <name>
                            <surname>Gurevicius</surname>
                            <given-names>Kestutis</given-names>
                        </name>
                        <aff>University of Eastern Finland, Finland</aff>
                    </contrib>
                </contrib-group>
                <author-notes>
                    <fn fn-type="conflict">
                        <p>
                            <bold>Competing interests: </bold>The authors have no competing interests to declare.</p>
                    </fn>
                </author-notes>
                <pub-date pub-type="epub">
                    <day>13</day>
                    <month>8</month>
                    <year>2014</year>
                </pub-date>
            </front-stub>
            <body>
                <p>Dear Dr. Rosburg</p>
                <p>
                    <italic>We would like to thank you for your careful consideration and suggestions to improve our article. Before receiving comments from the other reviewers we would like to exploit the possibility to provide some response before resubmission.</italic>
                </p>
                <p>
                    <italic>We would like to emphasize that MMN can be found in other species including rat in cortical and hippocampal areas while anaesthetized, but in our study with awake rats, MMN was not detectable. As for other comments we suggest the following corrections.</italic>
                    <list list-type="bullet">
                        <list-item>
                            <p>1. Figure 2 has now been re-labelled, as showing grand average data from Day 1. At the same time, the graphs are still labelled as &#x2018;representative examples&#x2019;. This is not as clear as it should be. First, it is not clear what is meant by &#x2018;representative&#x2019;. Second, grand average data should not be called &#x2018;examples&#x2019;. Moreover, in Figure 2 the absolute amplitudes of the cortical P60 are larger than the absolute amplitudes of the cortical N40. This is somewhat in contrast to Figure 3 that shows similar absolute amplitudes for the two components. Finally, given the significant difference in the hippocampal P60 between standards and deviants, grand average data of Experiment 2 need to be depicted, as previously requested.</p>
                        </list-item>
                    </list>&#x00a0;</p>
                <p>
                    <italic>For clarity we will replace Fig. 2. Title &#x201c;Representative examples of averaged AEPs obtained in the auditory oddball paradigm&#x201d; by &#x201c;Group average of AEPs recorded on the first day of the experiment 1&#x201d;. We chose these data because it is the first day of the exposure to auditory stimuli, and as such represents the shape of the waveform of other recordings, too. </italic>
                </p>
                <p>
                    <italic>Figure 2 represents the group average for the raw data while Fig. 3 shows the average of maximum peak amplitudes within these time windows. Since the components had some latency variation (see Table 1), the two ways of averaging the responses do not necessary lead to the same result. </italic>
                </p>
                <p>
                    <italic>Because of the huge amount of raw data and the format of the journal, we are, unfortunately, not able to provide all the complimentary figures of all our significant findings.However, as we strongly support transparency of scientific data and discussion, we would be pleased to provide additional figures for any interested reader. </italic>
                    <list list-type="bullet">
                        <list-item>
                            <p>2. The authors do not describe how artefacts were identified and on what basis data were excluded. It is insufficient to state that data were excluded due to a &#x201c;poor signal (i.e. bad electrode contact)&#x201d;. Such a description hinders any replication of the study.</p>
                        </list-item>
                    </list>
                    <italic>We will add the following sentence to our resubmission &#x201c;Typical excluded signal had a large number of discontinuities, signal was saturated or line frequency (50 Hz) pick-up exceeds 100 uV. Signal saturation indicates electrode detachment, large discontinuities indicate loose contacts, excessive noise indicates problem with electrode.&#x201d;</italic>
                    <list list-type="bullet">
                        <list-item>
                            <p>3. It is still not fully clear what reference electrode was used. The authors state a &#x201c;common reference electrode&#x201d; was used but they do not describe which electrodes were used for calculating it.</p>
                        </list-item>
                    </list>
                    <italic>In the methods section we described the following &#x201c;A frontal screw was selected as the ground and a common reference electrode&#x2026;&#x201d;. This recording methodology is the traditional method in rodent electrophysiology but different from human EEG recording methodology.</italic>
                    <list list-type="bullet">
                        <list-item>
                            <p>4. As also previously criticized by other reviewers, the description of the conducted statistics is incomplete with some F values missing, but there are some inconsistencies as well.&#x00a0;</p>
                        </list-item>
                    </list>
                    <italic>We will add the missing F values whenever there is a significant p-value. </italic>
                </p>
                <p>&#x00a0;
                    <list list-type="bullet">
                        <list-item>
                            <p>(a), Table 1 implies that one data point each was excluded from the analysis of Experiment 1. However, the submitted data file does not contain missing values. Consequently, the data file is hardly suited to reproduce the study results.&#x00a0;</p>
                        </list-item>
                    </list>
                    <italic>We have provided data collected from three experiments and the missing values are marked as n.a. This implies that data were excluded because of recording artefacts, as previously stated, or data were not available in this experiment.</italic>
                </p>
                <p>&#x00a0;
                    <list list-type="bullet">
                        <list-item>
                            <p>(b), it is also worth noting that the algebraic signs are reversed in this data file (with positive values for the N40 and negative for the P60 and P110 amplitude values).</p>
                        </list-item>
                    </list>
                    <italic>We thank for this careful notice.</italic>
                    <list list-type="bullet">
                        <list-item>
                            <p>(c), furthermore, attempts to reproduce the study results are hampered by the fact that sometimes the degrees of freedom are incorrectly reported (in particular for the repetition effects). Moreover, for the repetition effects, it is unclear whether the reported results of the ANOVA were Greenhouse-Geisser corrected when necessary. This needs to be indicated. - When I re-calculated the repetition effect of the cortical P60 in an ANOVA with Day (Day 1 vs. Day 2 vs. Day 3) and ODDBALL (standards vs. deviants) as within-subjects factors with the provided data, I revealed an insignificant main effect of DAY [F (2, 16) = 3.451, p = 0.094 after Greenhouse-Geisser correction, epsilon = 0.556].</p>
                        </list-item>
                    </list>
                </p>
                <p>
                    <italic>The reported results were tested by General Linear Model, Repeated Measures with two Independent Variables (Day =3 levels, Sound=2 levels). If data violate the sphericity assumption there are several corrections that can be applied to produce a valid F-ratio (Greenhouse&#x2013;Geisser correction is one of them). Other option is to use multivariate test, because it is not dependent upon the assumption of sphericity and SPSS will automatically produce test statistics. In case of cortical P60 during Experiment 1, we could find, for example, Pillai&#x2019;s trace Value=0.066, F(2,6)=5,87; P=0.039 [IBM SPSS Statistics Version 21]. This is exactly what is reported in the article.</italic>
                </p>
                <p>&#x00a0;
                    <list list-type="bullet">
                        <list-item>
                            <p>5. As previously mentioned, the concepts of &#x2018;long-term habituation&#x2019;, &#x2018;short-term habituation&#x2019; and &#x2018;long-term adaptation&#x2019; are poorly described and no explicit operational definitions are provided. On the basis of previous 'long-term habituation' studies in humans, I would not expect to see response decrements from day to day but within each experimental day (i.e. within an experimental session); on the basis of the provided data, I am little convinced that there were actually any substantial response decrements from day to day in Experiment 1 (see comment point 4 c).</p>
                        </list-item>
                    </list>
                    <italic>Short-term refers changes observed during a single odd-ball trial while long-term changes take place over days.&#x00a0; We will clarify our terminology and provide additional information of the temporal scale of short- and long-term adaption in our resubmission. </italic>
                </p>
                <p>
                    <italic>For further comments, see previous response. </italic>
                </p>
                <p>&#x00a0;
                    <list list-type="bullet">
                        <list-item>
                            <p>6. The authors argue that the contrast between the present and previous studies &#x201c;can be ascribed to the confounding effect of anesthesia on neuronal functions, as evidenced in a human anesthesia study&#x201d;. This is not particularly convincing since the cited study of Heinke et al. (2004) showed that the human MMN is diminished by anesthesia rather than the other way around. Moreover, the authors claim in the Introduction that the "severity of Alzheimer&#x2019;s disease, and presumable the progression of hippocampal damage, is related to the MMN amplitude decrement", referring to the study of). However, the severity of Alzheimer&#x2019;s disease and the progression of hippocampal damage were not related to the MMN amplitude decrement in this study.</p>
                        </list-item>
                    </list>
                    <italic>We have rephrased this sentence (&#x201c;can be ascribed to the confounding effect of anesthesia on consciousness level&#x201d;) to the following for clarity. In rodents, high doses of the standard anesthesia, urethane, severely reduces MMN amplitude (our unpublished finding). Notably, a light anesthesia in rats enables to elicit MMN which is not seen in awake state. Therefore, it seems that rats need to be lightly sedated to a produce state similar to human pre-attentive state.</italic>
                </p>
                <p>
                    <italic>Previous version of the sentence &#x201c;Severity of Alzheimer&#x2019;s disease, and presumable the progression of hippocampal damage, is related to the MMN amplitude decrement", will be replaced in the resubmission &#x201c;As it has been noted, that Alzheimer&#x2019;s disease affects MMN. When MMN amplitude was measured as a function of the inter-stimulus-interval the Alzheimer&#x2019;s disease patients showed more decrease as age-matched controls</italic> 
                    <italic>Pekkonen et al. (1994).&#x201d; </italic>
                </p>
                <p>&#x00a0;
                    <list list-type="bullet">
                        <list-item>
                            <p>7. The authors need to clarify to what data the correlation matrix in Table 2 refers to, as previously noted.</p>
                        </list-item>
                    </list>
                    <italic>As described in the text, Table 2 summarizes mutual correlations between amplitudes of middle-latency components. The mutual Pearson correlation coefficients were high and significant for all components of the hippocampal response (if the absolute value of one component grows there is a high probability that other components will also grow).</italic>
                </p>
                <p>&#x00a0;
                    <list list-type="bullet">
                        <list-item>
                            <p>8. The title of the study needs to be re-considered, as previously outlined.</p>
                        </list-item>
                    </list>
                    <italic>See, answer to part 5. </italic>
                </p>
            </body>
        </sub-article>
    </sub-article>
    <sub-article article-type="reviewer-report" id="report2955">
        <front-stub>
            <article-id pub-id-type="doi">10.5256/f1000research.2055.r2955</article-id>
            <title-group>
                <article-title>Reviewer response for version 1</article-title>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author">
                    <name>
                        <surname>Lever</surname>
                        <given-names>Colin</given-names>
                    </name>
                    <xref ref-type="aff" rid="r2955a1">1</xref>
                    <role>Referee</role>
                </contrib>
                <aff id="r2955a1">
                    <label>1</label>Department of Psychology, Durham University, Durham, UK</aff>
            </contrib-group>
            <author-notes>
                <fn fn-type="conflict">
                    <p>
                        <bold>Competing interests: </bold>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>10</day>
                <month>3</month>
                <year>2014</year>
            </pub-date>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2014 Lever C</copyright-statement>
                <copyright-year>2014</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access peer review report distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <related-article ext-link-type="doi" id="relatedArticleReport2955" related-article-type="peer-reviewed-article" xlink:href="10.12688/f1000research.2-182.v1"/>
            <custom-meta-group>
                <custom-meta>
                    <meta-name>recommendation</meta-name>
                    <meta-value>approve-with-reservations</meta-value>
                </custom-meta>
            </custom-meta-group>
        </front-stub>
        <body>
            <p>I have read the previous two referee reports, which were made several months ago, so I will try to confine myself to new points.</p>
            <p>
                <bold>Overview:</bold>
            </p>
            <p>This paper is acceptable but needs improvements, including a better narrative. In its current state, it will not be easy for a reader to know exactly how the paper adds to the current state of knowledge. The presentation is a little confusing, sometimes focused on the negative result that there is no hippocampal MMN, sometimes on the claim that there is no awake-rat MMN at all, sometimes on habituation of auditory ERP components that can be observed. The strands of all these stories should run throughout the report, including the Introduction, Results, and Discussion.</p>
            <p>The authors seem to claim that they show that there is no MMN in the awake rat&#x00a0;(&#x201c;Our conclusion that no auditory MMN exists in non-anesthetized&#x00a0;Rats&#x2026;&#x201d;). This claim needs further justification and clarification.</p>
            <p>
                <bold>Introduction:</bold>
            </p>
            <p>The introduction should better set out what 
                <italic>has</italic> been established about the electrophysiological correlates of the hippocampus in novelty, and why it might be reasonable to test if there is a hippocampal MMN. For instance in the rat, the species examined here, various investigators find increased theta power and/or reduced theta frequency and/or theta reset in novelty. (Theta reset is important to their arguments on the bottom of page 7.) In humans, 
                <ext-link ext-link-type="uri" xlink:href="http://www.ncbi.nlm.nih.gov/pubmed/8805701">Knight (1996)</ext-link> produced evidence that a P3 component of the novelty reaction was hippocampus dependent. These and other such evidences would link the hippocampus to novelty, and where available to &#x2018;mismatch novelty&#x2019;, and perhaps suggest some larger novelty-related function of the hippocampus. This kind of intellectual context would improve the paper. The introduction should then go on to set out a better rationale for why specifically the authors thought the MMN should be studied in a rat, and why they should look in the hippocampus for this. To my knowledge, it is not a standard current view to suggest that the hippocampus might be a generator of the MMN, but presumably some kind of case can be made? Much more reference to the literature is required. If the aim was simply to detect a rodent MMN, why not look at the auditory and frontal cortex?
                <list list-type="bullet">
                    <list-item>
                        <p>
                            <italic>Electrical and&#x00a0;magnetic recordings in human subjects have localized the MMN&#x00a0;generator to the auditory cortex, although a frontal component&#x00a0;has also been observed. In addition, there are some speculations&#x00a0;</italic>
                            <italic>on subcortical generators, especially the hippocampus, but those&#x00a0;cannot be indisputably verified in noninvasive recordings
                                <sup>5,6.</sup>"</italic>
                        </p>
                        <p>This is misleading. The last two references are not attempts to detect hippocampal origins of the MMN.</p>
                    </list-item>
                    <list-item>
                        <p>
                            <italic>
                                <italic>Therefore, the aim of the present study was to address a number&#x00a0;of unresolved issues related to MMN in the rat. First, anesthesia&#x00a0;was reported to attenuate MMN in the cat
                                    <sup>7</sup>. Therefore, we wanted&#x00a0;to test whether MMN can be evoked in freely moving rats
                                    <sup>14,15</sup> rather&#x00a0;than in the anesthetized preparation
                                    <sup>11,12</sup>. Second, we compared&#x00a0;the event-related potentials (ERPs) recorded using cortical and&#x00a0;hippocampal electrodes to reveal a possible hippocampal generator.&#x00a0;Third, to distinguish between MMN and long-term adaptation to&#x00a0;</italic>
                                <italic>standard auditory stimuli as suggested by Lazar and Metherate
                                    <sup>13</sup>,&#x00a0;we repeated the oddball stimulus set on two daily sessions and on&#x00a0;consecutive days. Fourth, to shed light on the neuropharmacology&#x00a0;of MMN, we manipulated the cholinergic input to the cortex and&#x00a0;hippocampus by systemic administration of scopolamine."&#x00a0;</italic>
                            </italic>
                        </p>
                        <p>Add test/rewrite to incorporate the idea that the paper does not have ANY results about the MMN, and to study the auditory-evoked components that are seen.</p>
                    </list-item>
                </list>
            </p>
            <p>
                <bold>Methods:</bold>
                <list list-type="bullet">
                    <list-item>
                        <p>
                            <italic>"The hippocampal electrode closest to the pyramidal&#x00a0;cell layer and the right parietal cortical electrode were selected for&#x00a0;the final analysis of evoked potentials"</italic>
                        </p>
                        <p>How was it determined which electrode was closest to the layer -&#x00a0;purely by histology? Did this turn out to matter much?</p>
                    </list-item>
                    <list-item>
                        <p>
                            <italic>"The rats were involved&#x00a0;in an EEG study for three weeks before the current study&#x00a0;on evoked potentials."</italic>
                        </p>
                        <p>The procedure of the previous study should be briefly described in a supplementary note together with a comment that they think the other study made no difference to this (assuming the authors think that).</p>
                    </list-item>
                    <list-item>
                        <p>
                            <italic>"In total 10 rats were recorded for the study but due to poor signaling some channels, the number of records in the analysis varies from&#x00a0;6 to 9."</italic>
                        </p>
                        <p>What were the minimum threshold criteria used to determine acceptability of signal?</p>
                    </list-item>
                </list>&#x00a0;</p>
            <p>
                <bold>Results:&#x00a0;</bold>
                <list list-type="bullet">
                    <list-item>
                        <p>I would suggest splitting up the results by cortical and hippocampal regions even more to avoid ambiguity and perhaps using results headings which summarise the results. That might improve the readability of this paper.</p>
                    </list-item>
                    <list-item>
                        <p>The figures and indeed main text should state more clearly what values are being entered into averages and so on. E.g. Figure 2, it says &#x2018;averaged AEPs&#x2019;. How many trials per rat, how many rats, an equivalent number of trials per rat?</p>
                    </list-item>
                    <list-item>
                        <p>Figure 3 and Results text 2
                            <sup>nd</sup> paragraph in Repetition effect on the responses: "
                            <italic>The cortical response to the&#x00a0;</italic>
                            <italic>standard tones reached the original (or higher) amplitude of Day 1&#x00a0;,
                                <italic>in Experiment 1 (Figure 3). The ANOVA for repeated measures&#x00a0;</italic>
                            </italic>
                            <italic>revealed significant enhancement of cortical P60 [F(1,6) = 12.9,&#x00a0;
                                <italic>p = 0.01] and P110 (p = 0.03) components between Day 3 of&#x00a0;</italic>
                            </italic>
                            <italic>Experiment 1 and Day 1 of Experiment 2."</italic>
                        </p>
                        <p>I suggest they use a different statistical symbol than a star to make this point in Figure 3, emphasising the between-experiment changes. The star is already used.</p>
                    </list-item>
                    <list-item>
                        <p>Table 2 legend. What is the measure being correlated (one amplitude value, mean amplitude over a set period?), and from which datasets? How does the n= 94 and 76 break down?</p>
                    </list-item>
                </list>&#x00a0;</p>
            <p>
                <bold>Discussion:</bold>
            </p>
            <p>&#x00a0;
                <list list-type="bullet">
                    <list-item>
                        <p>
                            <italic>"Our conclusion that no auditory MMN exists in non-anesthetized&#x00a0;rats contrasts with another studies conducted in anesthetized&#x00a0;rats
                                <sup>11,12,20</sup>.</italic>"</p>
                        <p>Overclaiming? On what basis can the authors say that &#x201c;no auditory MMN exists in non-anesthetized rats&#x201d;, when they have not recorded from the auditory cortex?&#x00a0;Or are they claiming they did sample the auditory cortex in some way? See the queries in Reviewer Rosburg Point 3b.</p>
                    </list-item>
                </list>
            </p>
            <p>Reviewer Expertise:</p>
            <p>NA</p>
            <p>I confirm that I have read this submission and believe that I have an appropriate level of expertise to confirm that it is of an acceptable scientific standard, however I have significant reservations, as outlined above.</p>
        </body>
    </sub-article>
    <sub-article article-type="reviewer-report" id="report2641">
        <front-stub>
            <article-id pub-id-type="doi">10.5256/f1000research.2055.r2641</article-id>
            <title-group>
                <article-title>Reviewer response for version 1</article-title>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author">
                    <name>
                        <surname>Rosburg</surname>
                        <given-names>Timm</given-names>
                    </name>
                    <xref ref-type="aff" rid="r2641a1">1</xref>
                    <role>Referee</role>
                </contrib>
                <aff id="r2641a1">
                    <label>1</label>Experimental Neuropsychology Unit, Department of Psychology, Saarland University, Saarbr&#x00fc;cken, Germany</aff>
            </contrib-group>
            <author-notes>
                <fn fn-type="conflict">
                    <p>
                        <bold>Competing interests: </bold>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>20</day>
                <month>12</month>
                <year>2013</year>
            </pub-date>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2013 Rosburg T</copyright-statement>
                <copyright-year>2013</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access peer review report distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <related-article ext-link-type="doi" id="relatedArticleReport2641" related-article-type="peer-reviewed-article" xlink:href="10.12688/f1000research.2-182.v1"/>
            <custom-meta-group>
                <custom-meta>
                    <meta-name>recommendation</meta-name>
                    <meta-value>approve-with-reservations</meta-value>
                </custom-meta>
            </custom-meta-group>
        </front-stub>
        <body>
            <p>The mismatch negativity (MMN) represents the cortical response to sound deviance in an otherwise uniform stimulation. This component of auditory evoked potentials (AEPs) has gained large interest in clinical neurophysiology. In order to understand underlying cortical mechanisms of the MMN, it is of great importance to further establish animal models that allow, for example, investigation into the effects of pharmacological interventions on MMN generation.</p>
            <p>Given this, the study of Gurevicius and co-workers addresses an important issue of clinical neurophysiology. In their study, AEPs in response to standard tones and deviants were recorded from the hippocampus and parietal cortex of awake, freely moving rats. However, as a main finding, a MMN-like signal could not be observed. Overall, I think the study would benefit from a clearer description of the relation between MMN findings in humans and animals, a clearer outline of the study purpose, the clarification of some methodological details, re-calculation of the amplitude values, and some stronger focus on significant results (rather than on null-findings). I have the following additional comments:
                <list list-type="order">
                    <list-item>
                        <p>The relation between human and animal MMN data is not sufficiently described: Invasive AEP recordings in humans did not reveal any evidence that the MMN is generated in the hippocampus (
                            <ext-link ext-link-type="uri" xlink:href="http://www.ncbi.nlm.nih.gov/pubmed/7536154">Halgren 
                                <italic>et al.,</italic> 1995</ext-link>; 
                            <ext-link ext-link-type="uri" xlink:href="http://www.ncbi.nlm.nih.gov/pubmed/7652119">Kropotov 
                                <italic>et al.,</italic>1995</ext-link>; 
                            <ext-link ext-link-type="uri" xlink:href="http://www.ncbi.nlm.nih.gov/pubmed/10686384">2000</ext-link>; 
                            <ext-link ext-link-type="uri" xlink:href="http://www.ncbi.nlm.nih.gov/pubmed/2593001">McCarthy 
                                <italic>et al.,</italic>1989</ext-link>; 
                            <ext-link ext-link-type="uri" xlink:href="http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1992525/">Rosburg 
                                <italic>et al., </italic>2007</ext-link>). In contrast, MMN-like signals in humans have been recorded from the temporal cortex (
                            <ext-link ext-link-type="uri" xlink:href="http://www.ncbi.nlm.nih.gov/pubmed/7652119">Kropotov 
                                <italic>et al., </italic>1995</ext-link>; 
                            <ext-link ext-link-type="uri" xlink:href="http://www.ncbi.nlm.nih.gov/pubmed/10686384">2000</ext-link>) and in some few instances also from the frontal cortex (
                            <ext-link ext-link-type="uri" xlink:href="http://www.ncbi.nlm.nih.gov/pubmed/15728656">Rosburg 
                                <italic>et al.,</italic> 2005</ext-link>). Consequently, I find it a little surprising that the authors did not observe a MMN-like hippocampal signal in rats. Moreover, it is not fully clear to me whether the authors doubt the value of other, already established animal models on MMN generation, like the mice model of Umbricht 
                            <italic>et al.</italic> (
                            <ext-link ext-link-type="uri" xlink:href="http://www.sciencedirect.com/science/article/pii/S1388245704003438">2005</ext-link>) or the cat model of Csepe 
                            <italic>et al.</italic> (
                            <ext-link ext-link-type="uri" xlink:href="http://www.sciencedirect.com/science/article/pii/0013469487901039">1987</ext-link>).</p>
                    </list-item>
                    <list-item>
                        <p>The study is entitled as &#x201c;
                            <italic>Short- and long-term habituation&#x2026;</italic>&#x201d;, and indeed much space is dedicated to the description on how the recorded AEPs varied from one recording day to the next or from one experiment to the next. However, it is not evident what the authors actually mean by &#x2018;short-term&#x2019; and &#x2018;long-term&#x2019;. In human recordings, &#x2018;short-term decrement&#x2019; is usually conceptualized as response decrease from one stimulus to the next. For this kind of decrement, it has been argued that it reflects a consequence of refractoriness (rather than a process of habituation) (
                            <ext-link ext-link-type="uri" xlink:href="http://www.ncbi.nlm.nih.gov/pubmed/11956003">Barry 
                                <italic>et al.,</italic> 1992</ext-link>; 
                            <ext-link ext-link-type="uri" xlink:href="http://www.sciencedirect.com/science/article/pii/S0167876098000403">Budd 
                                <italic>et al.,</italic> 1998</ext-link>; 
                            <ext-link ext-link-type="uri" xlink:href="http://www.ncbi.nlm.nih.gov/pubmed/15127083">Rosburg 
                                <italic>et al.</italic>, 2004</ext-link>; 
                            <ext-link ext-link-type="uri" xlink:href="http://www.ncbi.nlm.nih.gov/pubmed/16712584">2006</ext-link>; 
                            <ext-link ext-link-type="uri" xlink:href="http://www.ncbi.nlm.nih.gov/pubmed/20711562">2010</ext-link>; 
                            <ext-link ext-link-type="uri" xlink:href="http://www.ncbi.nlm.nih.gov/pubmed/23168131">2013</ext-link>). However, Gurevicius and co-workers did not assess this kind of response decrements, concentrating exclusively on different forms of long-term decrement. Such long-term decrements might reflect a process of habituation, albeit further studies are warranted to support this notion (
                            <ext-link ext-link-type="uri" xlink:href="http://www.sciencedirect.com/science/article/pii/S1388245701007271">Rosburg 
                                <italic>et al.,</italic> 2002).</ext-link> In consequence, the title of the study should be modified. Furthermore, I propose that the term &#x2018;long-term decrement&#x2019; should be used, rather than &#x2018;long-term habituation&#x2019;.</p>
                    </list-item>
                    <list-item>
                        <p>The authors present only exemplary AEP data, but no grand average data. Since the statistics are based on group data, the grand average AEP data need to be depicted (at least across experiment 1). Full evaluation of the study is not possible on the basis of exemplary data. Moreover, there are a couple of technical details that require clarification:</p>
                        <p>(a) The morphology of the depicted AEPs in the hippocampal and cortical recordings look rather similar. Based on the study of Ruusuvirta 
                            <italic>et al.</italic> (
                            <ext-link ext-link-type="uri" xlink:href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0054624">2013</ext-link>), I would have expected to find clear phase differences between the two recording sites.</p>
                        <p>(b) Related to this issue, the choice of the active and reference electrode sites needs to be justified. Is the parietal electrode assumed to record activity from the auditory cortex? Is the frontal reference electrode assumed to be electrically silent for auditory stimulation?</p>
                        <p>(c) Only analog filtering of the recordings (1-1000 Hz) is mentioned. Were data additionally offline-filtered?</p>
                        <p>(d) The authors mention that some recordings were excluded due to &#x201c;poor signal&#x201d; (p.2). What were the exact criteria for excluding data?</p>
                        <p>(e) The authors do not describe how the data were screened for artefacts and how artefacts were handled.</p>
                        <p>(f) According to the text, Table 1 refers to correlations between peak latency values. Is this really the case? Moreover, it is not clear on what data Tables 1 and 2 are based. Finally, the peak labels in Table 1 do not correspond to the labels used in the rest of the study.</p>
                        <p>(g) The authors should describe how the stimulus intensity was measured.</p>
                    </list-item>
                    <list-item>
                        <p>The N40, P60, and P110 peaks were defined as maximum deviations from the baseline. This kind of quantification introduces a bias for obtaining higher (absolute) amplitude values for AEPs to deviants than to standards because the noise levels affect peak amplitude measures (the maximum peak amplitude is increased by the overlying noise signal, and the noise level decreases with the number of trials, used for calculating the AEP). Thus, the peaks should be quantified as mean amplitudes instead. Moreover, the authors should not imply the existence of differences when the statistical analysis revealed non-significant results (e.g. &#x201c;
                            <italic>the P110 showed a similar, but non-significant trend [F(2,6) = 1.9, p = 0.24]</italic>&#x201d;, p. 4).</p>
                    </list-item>
                    <list-item>
                        <p>Scopolamine had no differential effect on the AEPs to standards and deviants, but scopolamine resulted in general reductions of AEP components (N40, P60). However, the current study cannot differentiate whether this effect is due to peripheral or central effects of the drug. In human recordings, scopolamine administration often leads to delayed AEP responses, in particular of the N100 (e.g. 
                            <ext-link ext-link-type="uri" xlink:href="http://www.sciencedirect.com/science/article/pii/S1053811905002624">Pekkonen 
                                <italic>et al.,</italic>2005</ext-link>), but not to an amplitude reduction. One study even described an enhancement of middle-latency auditory evoked neuromagnetic fields (
                            <ext-link ext-link-type="uri" xlink:href="http://www.sciencedirect.com/science/article/pii/S0304394098008933">J&#x00e4;&#x00e4;skelainen 
                                <italic>et al.</italic>, 1999</ext-link>). This divergence between human and animal data should be discussed.</p>
                    </list-item>
                    <list-item>
                        <p>There were some AEP differences between standards and deviants in the 2
                            <sup>nd</sup> experiment. For evaluation, these differences should be depicted as waveform.</p>
                    </list-item>
                </list>
            </p>
            <p>Reviewer Expertise:</p>
            <p>NA</p>
            <p>I confirm that I have read this submission and believe that I have an appropriate level of expertise to confirm that it is of an acceptable scientific standard, however I have significant reservations, as outlined above.</p>
        </body>
    </sub-article>
    <sub-article article-type="reviewer-report" id="report1785">
        <front-stub>
            <article-id pub-id-type="doi">10.5256/f1000research.2055.r1785</article-id>
            <title-group>
                <article-title>Reviewer response for version 1</article-title>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author">
                    <name>
                        <surname>Knierim</surname>
                        <given-names>James</given-names>
                    </name>
                    <xref ref-type="aff" rid="r1785a1">1</xref>
                    <role>Referee</role>
                </contrib>
                <aff id="r1785a1">
                    <label>1</label>Zanvyl Krieger Mind/Brain Institute and Department of Neuroscience, Johns Hopkins University, Baltimore, MD, USA</aff>
            </contrib-group>
            <author-notes>
                <fn fn-type="conflict">
                    <p>
                        <bold>Competing interests: </bold>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>23</day>
                <month>9</month>
                <year>2013</year>
            </pub-date>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2013 Knierim J</copyright-statement>
                <copyright-year>2013</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access peer review report distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <related-article ext-link-type="doi" id="relatedArticleReport1785" related-article-type="peer-reviewed-article" xlink:href="10.12688/f1000research.2-182.v1"/>
            <custom-meta-group>
                <custom-meta>
                    <meta-name>recommendation</meta-name>
                    <meta-value>approve</meta-value>
                </custom-meta>
            </custom-meta-group>
        </front-stub>
        <body>
            <p>This paper provides data on auditory evoked potentials in rats using a mismatch (oddball) paradigm and also tests the role of scopolamine on the evoked potentials. The work appears to have been conducted well and analyzed appropriately.</p>
            <p>I have a few minor suggestions for improvement.
                <list list-type="order">
                    <list-item>
                        <p>Fig 2A. 'P6' should be 'P60'</p>
                    </list-item>
                    <list-item>
                        <p>How much of the AEP was due to the reference screw v.s. the recording electrode? This is an issue that the authors may wish to address, as the reference screw presumably contributed to the evoked potentials measured in the differential recordings.</p>
                    </list-item>
                    <list-item>
                        <p>Table 1.&#x00a0;How were the n's determined in this table? Is this the total number of recording sites? Are any recording sites counted multiple times?</p>
                    </list-item>
                    <list-item>
                        <p>Need to provide F values and d.f. for all comparisons, not just some, in the paragraph under the heading "Increased cortical response to the deviant tone" as well as in other places in the manuscript. The authors should make sure that the appropriate test statistics and degrees of freedom are provided for all of the measurements not just the resulting p values.</p>
                    </list-item>
                </list>
            </p>
            <p>Reviewer Expertise:</p>
            <p>NA</p>
            <p>I confirm that I have read this submission and believe that I have an appropriate level of expertise to confirm that it is of an acceptable scientific standard.</p>
        </body>
    </sub-article>
</article>
