<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Publishing DTD v1.2 20190208//EN" "http://jats.nlm.nih.gov/publishing/1.2/JATS-journalpublishing1.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" article-type="research-article" dtd-version="1.2" xml:lang="en">
    <front>
        <journal-meta>
            <journal-id journal-id-type="pmc">F1000Research</journal-id>
            <journal-title-group>
                <journal-title>F1000Research</journal-title>
            </journal-title-group>
            <issn pub-type="epub">2046-1402</issn>
            <publisher>
                <publisher-name>F1000 Research Limited</publisher-name>
                <publisher-loc>London, UK</publisher-loc>
            </publisher>
        </journal-meta>
        <article-meta>
            <article-id pub-id-type="doi">10.12688/f1000research.13757.1</article-id>
            <article-categories>
                <subj-group subj-group-type="heading">
                    <subject>Research Article</subject>
                </subj-group>
                <subj-group>
                    <subject>Articles</subject>
                </subj-group>
            </article-categories>
            <title-group>
                <article-title>Optimization of conditions for the biological treatment of textile dyes using isolated soil bacteria</article-title>
                <fn-group content-type="pub-status">
                    <fn>
                        <p>[version 1; peer review: retracted]</p>
                    </fn>
                </fn-group>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author" corresp="yes">
                    <name>
                        <surname>Rahman</surname>
                        <given-names>Shafkat Shamim</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Formal Analysis</role>
                    <role content-type="http://credit.niso.org/">Validation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <uri content-type="orcid">https://orcid.org/0000-0002-9813-1548</uri>
                    <xref ref-type="corresp" rid="c1">a</xref>
                    <xref ref-type="aff" rid="a1">1</xref>
                    <xref ref-type="aff" rid="a2">2</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Alif</surname>
                        <given-names>Fahim Ahmed</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <role content-type="http://credit.niso.org/">Formal Analysis</role>
                    <role content-type="http://credit.niso.org/">Investigation</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Resources</role>
                    <xref ref-type="aff" rid="a1">1</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Hossain</surname>
                        <given-names>M. Mahboob</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Project Administration</role>
                    <role content-type="http://credit.niso.org/">Supervision</role>
                    <xref ref-type="aff" rid="a1">1</xref>
                </contrib>
                <aff id="a1">
                    <label>1</label>Department of Mathematics and Natural Sciences, BRAC University, Dhaka, 1212, Bangladesh</aff>
                <aff id="a2">
                    <label>2</label>United Surgical (BD) Ltd, Kadda, Gazipur, 1702, Bangladesh</aff>
            </contrib-group>
            <author-notes>
                <corresp id="c1">
                    <label>a</label>
                    <email xlink:href="mailto:shafkatshamimrahman@gmail.com">shafkatshamimrahman@gmail.com</email>
                </corresp>
                <fn fn-type="conflict">
                    <p>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>21</day>
                <month>3</month>
                <year>2018</year>
            </pub-date>
            <pub-date pub-type="collection">
                <year>2018</year>
            </pub-date>
            <volume>7</volume>
            <elocation-id>351</elocation-id>
            <history>
                <date date-type="accepted">
                    <day>14</day>
                    <month>3</month>
                    <year>2018</year>
                </date>
            </history>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2018 Rahman SS et al.</copyright-statement>
                <copyright-year>2018</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <self-uri content-type="pdf" xlink:href="https://f1000research.com/articles/7-351/pdf"/>
            <abstract>
                <p>
                    <bold>Background:</bold>&#x00a0;</p>
                <p>In the 21
                    <sup>st-</sup>century environmental pollution has been acknowledged as one of the major problems. The textile and dyeing industries contribute a major portion by discharging intensely complex effluent consisting of highly noxious azoic dyes.</p>
                <p>
                    <bold>Methods:</bold>&#x00a0;</p>
                <p>In this study, biological treatment using acclimatized microorganisms were employed in search of a cheap and eco-friendly substitute for color removal from textile waste. The microbial inocula were isolated from effluent soil samples and then applied to flasks containing azo dyes as the only source of carbon for decolorization.</p>
                <p>
                    <bold>Results:</bold>&#x00a0;</p>
                <p>Biochemical tests postulated predominance of 
                    <italic toggle="yes">Enterococcus</italic> and 
                    <italic toggle="yes">Bacillus</italic> bacterial strains. CO isolate or 
                    <italic toggle="yes">Bacillus farraginis</italic> emerged as the best decolorizer of Orange M2R dye, decolorizing 98% of the dye.  BG isolate or 
                    <italic toggle="yes">Paenibacillus macerans</italic> showed maximum decolorization on Green GS dye that decolorized 97% of the dye. The optimum physiochemical condition for decolorization of OM2R and GGS dye was pH 7.0, 2% NaCl conc., 1% initial dye conc. and 37&#x00b0;C temperature by the selected isolates.</p>
                <p>
                    <bold>Conclusions:</bold>&#x00a0;</p>
                <p>The findings were validated and have the potential for bioremediation in textile waste effluent treatment plants.</p>
            </abstract>
            <kwd-group kwd-group-type="author">
                <kwd>Azo dye; decolorization; Enterococcus; Bacillus; optimization</kwd>
            </kwd-group>
            <funding-group>
                <funding-statement>The author(s) declared that no grants were involved in supporting this work.</funding-statement>
            </funding-group>
        </article-meta>
    </front>
    <body>
        <sec>
            <title/>
            <p/>
            <boxed-text orientation="portrait" position="float">
                <label>Editorial note:</label>
                <p>23rd May 2018 : Significant concerns have been raised about the overlap in the data presented in this paper, and that of another recently published article [Siddique and Alif; ARRB, 22(5): 1-12, 2018; Article no.ARRB.38637; 
                    <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.9734/ARRB/2018/38637">https://doi.org/10.9734/ARRB/2018/38637</ext-link>. In addition, the second and last author listed on this article, Fahim Ahmed Alif and M. Mahboob Hossain have stated that they were not aware of the submission of this article to F1000Research, and did not agree to be authors. We are currently investigating this and have suspended all peer review activity in the meantime.</p>
            </boxed-text>
        </sec>
        <sec>
            <title>Abbreviations</title>
            <p>OM2R - Orange M2R; GGS - Green GS; NaCl - sodium chloride; NaOCl - sodium hypochlorite; WAO - wet air oxidation; SM - salt media; NA - nutrient agar; O.D. - optical density; MR - methyl red; VP - Voges Proskauer; MIU - Motility Indole Urease Test; ml - milliliter; g/L - gram per liter.</p>
        </sec>
        <sec sec-type="intro">
            <title>Introduction</title>
            <p>Industrialization has expanded in every corner of the globe in the 21
                <sup>st-</sup>century and the textile industry has emerged as a leading sector. It uses thousands of tons of synthetic dyes (azo) annually
                <sup>
                    <xref ref-type="bibr" rid="ref-1">1</xref>
                </sup>. A large portion of those goes into water bodies untreated
                <sup>
                    <xref ref-type="bibr" rid="ref-2">2</xref>
                </sup>. Carcinogenic and recalcitrant molecules present in the dye penetrate into the ecosystem and harm every member of the system
                <sup>
                    <xref ref-type="bibr" rid="ref-3">3</xref>
                </sup>. Humans use the polluted water directly for daily necessities which may result in diseases such as cancer, new genetic mutations or changes in the DNA etc. becoming an epidemic.</p>
            <p>The textile industry in Bangladesh accounts for 45% of all industrial employment and contributes 5% to the total national income
                <sup>
                    <xref ref-type="bibr" rid="ref-4">4</xref>
                </sup>. The industry employs nearly 4 million people, mostly women
                <sup>
                    <xref ref-type="bibr" rid="ref-5">5</xref>
                </sup>. Despite the significant economic contribution, it has brought with it a range of environmental problems, mostly pollution of water resources. The textile industry consumes large quantities of water for various processes and discharges equally large volumes of wastewaters containing a variety of pollutants and coloring agents such as the azo dye
                <sup>
                    <xref ref-type="bibr" rid="ref-6">6</xref>,
                    <xref ref-type="bibr" rid="ref-7">7</xref>
                </sup>.</p>
            <p>It is estimated that over 2,80,000 tons of textile dyes are discharged in industrial effluent every year, worldwide. Therefore, pollution from these discharges contaminated with dyestuff is becoming alarming
                <sup>
                    <xref ref-type="bibr" rid="ref-8">8</xref>,
                    <xref ref-type="bibr" rid="ref-9">9</xref>
                </sup>. This sector is placed as a major source of water pollution in Bangladesh
                <sup>
                    <xref ref-type="bibr" rid="ref-10">10</xref>
                </sup>.</p>
            <p>Textile wastewater is highly colored, resulting in the blocking of the majority of sunlight, thereby retarding the growth of aquatic animals and plants; it also contains the dissolved toxic substance and carcinogens
                <sup>
                    <xref ref-type="bibr" rid="ref-11">11</xref>,
                    <xref ref-type="bibr" rid="ref-12">12</xref>
                </sup>. The serious damage of pollution is caused mainly due to the durability of the dyes in wastewater
                <sup>
                    <xref ref-type="bibr" rid="ref-13">13</xref>
                </sup>. Azo dyes are widely known coloring agents used in industries and hence commonly released in the environment
                <sup>
                    <xref ref-type="bibr" rid="ref-14">14</xref>
                </sup>. The dye wastewaters are extremely toxic to both aquatic fauna and flora, crop plants, and human beings
                <sup>
                    <xref ref-type="bibr" rid="ref-15">15</xref>
                </sup>.</p>
            <p>At present, there are several techniques that can be employed in dye removal from effluents. However, these methods are varied in efficiency due to the variety of existent dyes and to the effluents complexity, and the combination of various methods may be considered since each method showed its limitations. There are three categories of existing methods: physical, chemical and biological. Physical methods like Coagulation/Flocculation, Adsorption, Membrane filtration, and Ion exchange are expensive. Chemical methods like Fenton&#x2019;s reagent, Ozone, Photochemical, Sodium hypochlorite (NaOCl), Electrolysis and wet air oxidation are not cost effective and produce toxic byproduct.</p>
            <p>Biological treatment, in the form of bacterial degradation, has been mainly applied in the removal of azo dyes
                <sup>
                    <xref ref-type="bibr" rid="ref-16">16</xref>&#x2013;
                    <xref ref-type="bibr" rid="ref-17">17</xref>
                </sup>, which generally is resistant to aerobic degradation
                <sup>
                    <xref ref-type="bibr" rid="ref-18">18</xref>,
                    <xref ref-type="bibr" rid="ref-19">19</xref>
                </sup>. However, its degradation was observed in anaerobic conditions, but aromatic amines are formed as a final product, which can be toxic, mutagenic and carcinogenic
                <sup>
                    <xref ref-type="bibr" rid="ref-20">20</xref>
                </sup>. Under these anaerobic conditions, it is not possible to degrade the aromatic amines formed, which in turn are only degraded in an aerobic environment. Thus, to achieve a complete degradation of azo dyes a method that combines anaerobic treatment of the dyes with the mineralization of aromatic amines under aerobic conditions should be applied
                <sup>
                    <xref ref-type="bibr" rid="ref-21">21</xref>,
                    <xref ref-type="bibr" rid="ref-22">22</xref>
                </sup>. This research aimed to identify effective dye degrading bacteria from effluent soil samples and optimize the physiochemical condition for their optimum growth
                <sup>
                    <xref ref-type="bibr" rid="ref-23">23</xref>
                </sup>.</p>
        </sec>
        <sec sec-type="methods">
            <title>Methods</title>
            <sec>
                <title>Soil sample and azo dye collection</title>
                <p>Four soil samples (A: 
                    <italic toggle="yes">23&#x00b0;56&#x2032;52.6&#x2033;N, 90&#x00b0;15&#x2032;32.6&#x2033;E</italic>; B: 
                    <italic toggle="yes">23&#x00b0;47&#x2032;41.7&#x2033;N, 90&#x00b0;15&#x2032;34.1&#x2033;E</italic>; C: 
                    <italic toggle="yes">23&#x00b0;46&#x2032;54.0&#x2033;N, 90&#x00b0;20&#x2032;05.3&#x2033;E</italic>; D: 
                    <italic toggle="yes">23&#x00b0;56&#x2032;52.8&#x2033;N, 90&#x00b0;16&#x2032;01.2&#x2033;E</italic>) were aseptically collected from a textile effluent disposal area, in Savar, Hemayetpur and Aminbazar in June 2015. Sterile plastic containers were used to carry the soil samples. The samples were stored at Microbiology and Biotechnology Research Laboratory under Dpt. of MNS, BRAC University in sterile plastic bags at 4&#x00b0;C (to keep the microorganism viable) for later use
                    <sup>
                        <xref ref-type="bibr" rid="ref-24">24</xref>
                    </sup>. Commercially available azo dyes (Meera Dyestuff Industries, India) were collected from Mitford dye market in Dhaka.</p>
            </sec>
            <sec>
                <title>Inoculation in dye-containing media, isolation and screening</title>
                <p>One gram of each of the soil (effluent) samples (A, B, C, D) were taken to prepare a homogenous suspension. The suspension of each sample was individually applied to sixteen 1% dye containing (eight Orange M2R - OM2R and eight Green GS - GGS) SM broth media (glucose - 10 g/L; #G8270, dipotassium phosphate - 0.6 g/L; #1551128 USP, peptone - 10 g/L; #P7750, monopotassium phosphate - 1.9 g/L; #1551139 USP, magnesium sulfate - 1 g/L; #M2643, yeast extract - 1 g/L; #Y1625, pH: 6.0 - 6.4; Sigma Aldrich, St Louis, MO, USA) to detect the dye degrading capability. 1% solution of OM2R and GGS was made by adding 0.5g of dye into the 50ml distilled water. After 5 days, each conical flask was compared with the control and decolorization was observed. As each of the samples (A, B, C and D) contained a highly concentrated mixture of different types of microorganism, up to 10
                    <sup>-4</sup> and 10
                    <sup>-5</sup> dilutions were performed, and spread plate technique applied on NA plates followed by incubation for 24 hours at 37&#x00b0;C to obtain eight soil isolates (AO, BO, CO, DO, AG, BG, CG, DG). Selected isolates, based on morphology, were enriched in NA media and incubated for 24 hours at 37&#x00b0;C. The plates were sealed, refrigerated at 4&#x00b0;C and were frequently subcultured.</p>
            </sec>
            <sec>
                <title>Media optimization</title>
                <p>Optimum growth conditions for the isolates were identified applying different physiochemical state (dye concentration, pH, NaCl concentration, temperature) to the time of growth. The best four selected isolates were cultured in 50 ml SM broth with three different dye concentrations of 1%, 3% and 5%; for pH (5 to 8; adjusted by adding drops of basic NaOH or acidic diluted HCl in the solution) (Model: E-201-C, China), for NaCl tolerance (added 2%, 4%, 6% and 8% concentrated Sigma brand solution to the broth and incubated), and for temperature (30&#x00b0;C, 37&#x00b0;C, 45&#x00b0;C and 55&#x00b0;C) and incubated (Model: SAARC) at 37&#x00b0;C (except temperature parameter) for a period of 5 days with corresponding dye OM2R and GGS. Then, O.D. was measured by adjusting the wavelength at 590nm for OM2R and 510nm for GGS (Model: UV-VIS spectrophotometer UVmini-1240; Shimadzu, Kyoto, Japan). Each experiment was repeated to validate the results. The representative data is the average of all results. 
                    <inline-formula>
                        <mml:math display="inline" id="math1">
                            <mml:mrow>
                                <mml:mtext>Decolorization</mml:mtext>
                                <mml:mo>was</mml:mo>
                                <mml:mo>measured</mml:mo>
                                <mml:mo>by</mml:mo>
                                <mml:mo>-</mml:mo>
                                <mml:mo>Decolorization</mml:mo>
                                <mml:mo>(</mml:mo>
                                <mml:mo>%</mml:mo>
                                <mml:mo>)</mml:mo>
                                <mml:mo>=</mml:mo>
                                <mml:mrow>
                                    <mml:mo>{</mml:mo>
                                    <mml:mrow>
                                        <mml:mfrac>
                                            <mml:mrow>
                                                <mml:mrow>
                                                    <mml:mo>(</mml:mo>
                                                    <mml:mrow>
                                                        <mml:mtext>Initial O</mml:mtext>
                                                        <mml:mo>.</mml:mo>
                                                        <mml:mo>D</mml:mo>
                                                        <mml:mo>.</mml:mo>
                                                        <mml:mo>-</mml:mo>
                                                        <mml:mtext>Final</mml:mtext>
                                                        <mml:mo>O</mml:mo>
                                                        <mml:mo>.</mml:mo>
                                                        <mml:mo>D</mml:mo>
                                                        <mml:mo>.</mml:mo>
                                                    </mml:mrow>
                                                    <mml:mo>)</mml:mo>
                                                </mml:mrow>
                                            </mml:mrow>
                                            <mml:mrow>
                                                <mml:mtext>Initial</mml:mtext>
                                                <mml:mo>O</mml:mo>
                                                <mml:mo>.</mml:mo>
                                                <mml:mo>D</mml:mo>
                                                <mml:mtext>.</mml:mtext>
                                            </mml:mrow>
                                        </mml:mfrac>
                                    </mml:mrow>
                                    <mml:mo>}</mml:mo>
                                </mml:mrow>
                                <mml:mo>&#x00d7;</mml:mo>
                                <mml:mn>100</mml:mn>
                            </mml:mrow>
                        </mml:math>
                    </inline-formula>
                </p>
            </sec>
            <sec>
                <title>Biochemical characterization</title>
                <p>Gram staining and biochemical tests were performed on the bacterial isolates according to the Microbiology Laboratory Manual
                    <sup>
                        <xref ref-type="bibr" rid="ref-25">25</xref>
                    </sup>. Standard protocols were followed by gram staining and then the dried slides were observed under a microscope. 
                    <ext-link ext-link-type="uri" xlink:href="http://www.microbelibrary.org/library/laboratory-test/3658-motility-test-mediumprotocol">Motility tests</ext-link>, enzyme tests (indole utilization, urease test, 
                    <ext-link ext-link-type="uri" xlink:href="http://www.microbelibrary.org/component/resource/laboratory-test/3203-citrate-testprotocol">citrate utilization</ext-link>, 
                    <ext-link ext-link-type="uri" xlink:href="http://www.austincc.edu/microbugz/handouts/Catalase%20and%20Oxidase%20Tests.pdf">oxidase test</ext-link>, 
                    <ext-link ext-link-type="uri" xlink:href="http://www.austincc.edu/microbugz/handouts/Catalase%20and%20Oxidase%20Tests.pdf">catalase test</ext-link>, 
                    <ext-link ext-link-type="uri" xlink:href="http://www.microbelibrary.org/library/laboratory-test/3780-starch-agar-protocol">starch hydrolysis</ext-link>, 
                    <ext-link ext-link-type="uri" xlink:href="http://www.microbelibrary.org/library/laboratory-test/3660-nitrate-and-nitrite-reductiontest-protocols">nitrate reduction</ext-link>), fermentation tests (
                    <ext-link ext-link-type="uri" xlink:href="http://www.microbelibrary.org/library/laboratory-test/3779-carbohydratefermentation-protocol">carbohydrate fermentation</ext-link>, 
                    <ext-link ext-link-type="uri" xlink:href="http://www.austincc.edu/microbugz/mrvp_test.php">methyl red test</ext-link>, 
                    <ext-link ext-link-type="uri" xlink:href="http://www.austincc.edu/microbugz/mrvp_test.php">Voges-Proskauer test</ext-link>, arabinose test, fructose test, galactose test, glucose test, lactose test, maltose test, mannitol test, sucrose test, trehalose test) and salt tolerant tests
                    <sup>
                        <xref ref-type="bibr" rid="ref-26">26</xref>
                    </sup> were conducted according to individual standard protocols.</p>
            </sec>
        </sec>
        <sec sec-type="results">
            <title>Results</title>
            <p>Four isolates AO, BO, CO and DO were collected from effluent soil samples preliminarily inoculated for 5 days in SM broth containing 1% OM2R azo dye at room temperature to decolorize the dye. CO and AO isolates showed the highest decolorization rate (99% and 93%) and were selected for further optimization. The other two isolates performed moderately. For 1% GGS dye degradation BG (93%) and CG (94%) isolates were better than AG and DG.  (
                <xref ref-type="table" rid="T1">Table 1</xref>).</p>
            <table-wrap id="T1" orientation="portrait" position="anchor">
                <label>Table 1. </label>
                <caption>
                    <title>Results of O.D. at fifth day after de-colorization of 1% concentration dye in SM broth at room temperature.</title>
                </caption>
                <table content-type="article-table" frame="hsides">
                    <thead>
                        <tr>
                            <th colspan="1" rowspan="1"/>
                            <th align="center" colspan="1" rowspan="1">1
                                <sup>st</sup> O.D.</th>
                            <th align="center" colspan="1" rowspan="1">2
                                <sup>nd</sup> O.D.</th>
                            <th align="center" colspan="1" rowspan="1">Avg. O.D.</th>
                            <th align="center" colspan="1" rowspan="1">De-colorization (%)</th>
                        </tr>
                    </thead>
                    <tbody>
                        <tr>
                            <td align="left" colspan="1" rowspan="1">Control</td>
                            <td align="left" colspan="1" rowspan="1">0</td>
                            <td align="left" colspan="1" rowspan="1">0</td>
                            <td align="left" colspan="1" rowspan="1">0</td>
                            <td colspan="1" rowspan="1"/>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1">AO</td>
                            <td align="left" colspan="1" rowspan="1">0.009</td>
                            <td align="left" colspan="1" rowspan="1">0.007</td>
                            <td align="left" colspan="1" rowspan="1">0.008</td>
                            <td align="left" colspan="1" rowspan="1">93</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1">BO</td>
                            <td align="left" colspan="1" rowspan="1">0.025</td>
                            <td align="left" colspan="1" rowspan="1">0.037</td>
                            <td align="left" colspan="1" rowspan="1">0.031</td>
                            <td align="left" colspan="1" rowspan="1">74</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1">CO</td>
                            <td align="left" colspan="1" rowspan="1">0.001</td>
                            <td align="left" colspan="1" rowspan="1">0.001</td>
                            <td align="left" colspan="1" rowspan="1">0.001</td>
                            <td align="left" colspan="1" rowspan="1">99</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1">DO</td>
                            <td align="left" colspan="1" rowspan="1">0.025</td>
                            <td align="left" colspan="1" rowspan="1">0.021</td>
                            <td align="left" colspan="1" rowspan="1">0.023</td>
                            <td align="left" colspan="1" rowspan="1">81</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1">AG</td>
                            <td align="left" colspan="1" rowspan="1">0.021</td>
                            <td align="left" colspan="1" rowspan="1">0.013</td>
                            <td align="left" colspan="1" rowspan="1">0.017</td>
                            <td align="left" colspan="1" rowspan="1">89</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1">BG</td>
                            <td align="left" colspan="1" rowspan="1">0.009</td>
                            <td align="left" colspan="1" rowspan="1">0.013</td>
                            <td align="left" colspan="1" rowspan="1">0.011</td>
                            <td align="left" colspan="1" rowspan="1">93</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1">CG</td>
                            <td align="left" colspan="1" rowspan="1">0.009</td>
                            <td align="left" colspan="1" rowspan="1">0.009</td>
                            <td align="left" colspan="1" rowspan="1">0.009</td>
                            <td align="left" colspan="1" rowspan="1">94</td>
                        </tr>
                        <tr>
                            <td align="left" colspan="1" rowspan="1">DG</td>
                            <td align="left" colspan="1" rowspan="1">0.043</td>
                            <td align="left" colspan="1" rowspan="1">0.033</td>
                            <td align="left" colspan="1" rowspan="1">0.038</td>
                            <td align="left" colspan="1" rowspan="1">76</td>
                        </tr>
                    </tbody>
                </table>
            </table-wrap>
            <sec>
                <title>Dye concentration optimization</title>
                <p>After five days of reaction, CO isolates achieved 98% decolorization in SM broth containing 1% OM2R dye. The same rates were also observed in 3% dye concentration. AO lagged in all three (1%, 3% and 5%) reactions. Degradation rate gradually decreased at higher concentration dye-containing media. Intriguingly, CG isolates resulted in 93% decolorization for both 1% and 3% dye concentration.</p>
                <p>In GGS dye-containing media, 97%, 94% and 81% decolorization were achieved with the BG isolate in 1%, 3% and 5% dye concentration media respectively. CG isolates demonstrated a lesser rate in all three parameters (
                    <xref ref-type="table" rid="T2">Table 2</xref>; 
                    <xref ref-type="other" rid="DS0">Dataset 1</xref>
                    <sup>
                        <xref ref-type="bibr" rid="ref-27">27</xref>
                    </sup>). pH optimization showed, highest rate (90%) in pH 7 by AO isolate in OM2R dye and 92% by BG isolate in the same parameter. AO isolate also showed a slightly higher response in 2% NaCl media compared to CO. Both isolates resulted in gradually reduced rates of decolorization in 4%, 6% and 8% NaCl containing media. For GGS dye, BG isolate was superior to all other isolates, achieving 89% decolorization in 2% NaCl. The optimum temperature was 37&#x00b0;C in all four isolates. AO achieved 93% decolorization and BG 90% in two different dye-containing media. The decolorization rate gradually decreased with temperature elevation (
                    <xref ref-type="table" rid="T3">Table 3</xref>; 
                    <xref ref-type="other" rid="DS1">Dataset 2</xref>
                    <sup>
                        <xref ref-type="bibr" rid="ref-28">28</xref>
                    </sup>). In summary, 1% dye concentration, pH 7, 2% NaCl and 37&#x00b0;C appeared to be the optimum physiochemical condition for dye decolorization.</p>
                <table-wrap id="T2" orientation="portrait" position="anchor">
                    <label>Table 2. </label>
                    <caption>
                        <title>Results of O.D. &amp; de-colorization (%) with different concentrations of dye.</title>
                    </caption>
                    <table content-type="article-table" frame="hsides">
                        <thead>
                            <tr>
                                <th colspan="1" rowspan="1"/>
                                <th align="center" colspan="10" rowspan="1">O.D. &amp; De-colorization (%) in 1% conc.</th>
                                <th align="center" colspan="10" rowspan="1">O.D. &amp; De-colorization (%) in 3% conc.</th>
                                <th align="center" colspan="10" rowspan="1">O.D. &amp; De-colorization (%) in 5% conc.</th>
                            </tr>
                            <tr>
                                <th colspan="1" rowspan="1"/>
                                <th align="center" colspan="2" rowspan="1">Day 1</th>
                                <th align="center" colspan="2" rowspan="1">Day 2</th>
                                <th align="center" colspan="2" rowspan="1">Day 3</th>
                                <th align="center" colspan="2" rowspan="1">Day 4</th>
                                <th align="center" colspan="2" rowspan="1">Day 5</th>
                                <th align="center" colspan="2" rowspan="1">Day 1</th>
                                <th align="center" colspan="2" rowspan="1">Day 2</th>
                                <th align="center" colspan="2" rowspan="1">Day 3</th>
                                <th align="center" colspan="2" rowspan="1">Day 4</th>
                                <th align="center" colspan="2" rowspan="1">Day 5</th>
                                <th align="center" colspan="2" rowspan="1">Day 1</th>
                                <th align="center" colspan="2" rowspan="1">Day 2</th>
                                <th align="center" colspan="2" rowspan="1">Day 3</th>
                                <th align="center" colspan="2" rowspan="1">Day 4</th>
                                <th align="center" colspan="2" rowspan="1">Day 5</th>
                            </tr>
                        </thead>
                        <tbody>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Control</td>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">AO</td>
                                <td align="left" colspan="1" rowspan="1">0.031</td>
                                <td align="left" colspan="1" rowspan="1">74</td>
                                <td align="left" colspan="1" rowspan="1">0.025</td>
                                <td align="left" colspan="1" rowspan="1">79</td>
                                <td align="left" colspan="1" rowspan="1">0.019</td>
                                <td align="left" colspan="1" rowspan="1">84</td>
                                <td align="left" colspan="1" rowspan="1">0.013</td>
                                <td align="left" colspan="1" rowspan="1">89</td>
                                <td align="left" colspan="1" rowspan="1">0.009</td>
                                <td align="left" colspan="1" rowspan="1">93</td>
                                <td align="left" colspan="1" rowspan="1">0.041</td>
                                <td align="left" colspan="1" rowspan="1">70</td>
                                <td align="left" colspan="1" rowspan="1">0.036</td>
                                <td align="left" colspan="1" rowspan="1">74</td>
                                <td align="left" colspan="1" rowspan="1">0.024</td>
                                <td align="left" colspan="1" rowspan="1">82</td>
                                <td align="left" colspan="1" rowspan="1">0.020</td>
                                <td align="left" colspan="1" rowspan="1">86</td>
                                <td align="left" colspan="1" rowspan="1">0.018</td>
                                <td align="left" colspan="1" rowspan="1">87</td>
                                <td align="left" colspan="1" rowspan="1">0.047</td>
                                <td align="left" colspan="1" rowspan="1">72</td>
                                <td align="left" colspan="1" rowspan="1">0.036</td>
                                <td align="left" colspan="1" rowspan="1">78</td>
                                <td align="left" colspan="1" rowspan="1">0.030</td>
                                <td align="left" colspan="1" rowspan="1">82</td>
                                <td align="left" colspan="1" rowspan="1">0.024</td>
                                <td align="left" colspan="1" rowspan="1">85</td>
                                <td align="left" colspan="1" rowspan="1">0.021</td>
                                <td align="left" colspan="1" rowspan="1">87</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">CO</td>
                                <td align="left" colspan="1" rowspan="1">0.020</td>
                                <td align="left" colspan="1" rowspan="1">83</td>
                                <td align="left" colspan="1" rowspan="1">0.011</td>
                                <td align="left" colspan="1" rowspan="1">90</td>
                                <td align="left" colspan="1" rowspan="1">0.009</td>
                                <td align="left" colspan="1" rowspan="1">93</td>
                                <td align="left" colspan="1" rowspan="1">0.007</td>
                                <td align="left" colspan="1" rowspan="1">94</td>
                                <td align="left" colspan="1" rowspan="1">0.003</td>
                                <td align="left" colspan="1" rowspan="1">98</td>
                                <td align="left" colspan="1" rowspan="1">0.029</td>
                                <td align="left" colspan="1" rowspan="1">78</td>
                                <td align="left" colspan="1" rowspan="1">0.022</td>
                                <td align="left" colspan="1" rowspan="1">84</td>
                                <td align="left" colspan="1" rowspan="1">0.015</td>
                                <td align="left" colspan="1" rowspan="1">89</td>
                                <td align="left" colspan="1" rowspan="1">0.011</td>
                                <td align="left" colspan="1" rowspan="1">92</td>
                                <td align="left" colspan="1" rowspan="1">0.008</td>
                                <td align="left" colspan="1" rowspan="1">94</td>
                                <td align="left" colspan="1" rowspan="1">0.038</td>
                                <td align="left" colspan="1" rowspan="1">77</td>
                                <td align="left" colspan="1" rowspan="1">0.030</td>
                                <td align="left" colspan="1" rowspan="1">82</td>
                                <td align="left" colspan="1" rowspan="1">0.021</td>
                                <td align="left" colspan="1" rowspan="1">87</td>
                                <td align="left" colspan="1" rowspan="1">0.020</td>
                                <td align="left" colspan="1" rowspan="1">88</td>
                                <td align="left" colspan="1" rowspan="1">0.016</td>
                                <td align="left" colspan="1" rowspan="1">90</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">BG</td>
                                <td align="left" colspan="1" rowspan="1">0.025</td>
                                <td align="left" colspan="1" rowspan="1">85</td>
                                <td align="left" colspan="1" rowspan="1">0.018</td>
                                <td align="left" colspan="1" rowspan="1">89</td>
                                <td align="left" colspan="1" rowspan="1">0.013</td>
                                <td align="left" colspan="1" rowspan="1">92</td>
                                <td align="left" colspan="1" rowspan="1">0.009</td>
                                <td align="left" colspan="1" rowspan="1">95</td>
                                <td align="left" colspan="1" rowspan="1">0.005</td>
                                <td align="left" colspan="1" rowspan="1">97</td>
                                <td align="left" colspan="1" rowspan="1">0.031</td>
                                <td align="left" colspan="1" rowspan="1">83</td>
                                <td align="left" colspan="1" rowspan="1">0.023</td>
                                <td align="left" colspan="1" rowspan="1">87</td>
                                <td align="left" colspan="1" rowspan="1">0.019</td>
                                <td align="left" colspan="1" rowspan="1">89</td>
                                <td align="left" colspan="1" rowspan="1">0.016</td>
                                <td align="left" colspan="1" rowspan="1">91</td>
                                <td align="left" colspan="1" rowspan="1">0.010</td>
                                <td align="left" colspan="1" rowspan="1">94</td>
                                <td align="left" colspan="1" rowspan="1">0.079</td>
                                <td align="left" colspan="1" rowspan="1">63</td>
                                <td align="left" colspan="1" rowspan="1">0.066</td>
                                <td align="left" colspan="1" rowspan="1">69</td>
                                <td align="left" colspan="1" rowspan="1">0.051</td>
                                <td align="left" colspan="1" rowspan="1">76</td>
                                <td align="left" colspan="1" rowspan="1">0.044</td>
                                <td align="left" colspan="1" rowspan="1">80</td>
                                <td align="left" colspan="1" rowspan="1">0.039</td>
                                <td align="left" colspan="1" rowspan="1">81</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">CG</td>
                                <td align="left" colspan="1" rowspan="1">0.033</td>
                                <td align="left" colspan="1" rowspan="1">80</td>
                                <td align="left" colspan="1" rowspan="1">0.026</td>
                                <td align="left" colspan="1" rowspan="1">85</td>
                                <td align="left" colspan="1" rowspan="1">0.019</td>
                                <td align="left" colspan="1" rowspan="1">89</td>
                                <td align="left" colspan="1" rowspan="1">0.015</td>
                                <td align="left" colspan="1" rowspan="1">91</td>
                                <td align="left" colspan="1" rowspan="1">0.011</td>
                                <td align="left" colspan="1" rowspan="1">93</td>
                                <td align="left" colspan="1" rowspan="1">0.042</td>
                                <td align="left" colspan="1" rowspan="1">76</td>
                                <td align="left" colspan="1" rowspan="1">0.030</td>
                                <td align="left" colspan="1" rowspan="1">83</td>
                                <td align="left" colspan="1" rowspan="1">0.022</td>
                                <td align="left" colspan="1" rowspan="1">86</td>
                                <td align="left" colspan="1" rowspan="1">0.017</td>
                                <td align="left" colspan="1" rowspan="1">90</td>
                                <td align="left" colspan="1" rowspan="1">0.013</td>
                                <td align="left" colspan="1" rowspan="1">93</td>
                                <td align="left" colspan="1" rowspan="1">0.098</td>
                                <td align="left" colspan="1" rowspan="1">54</td>
                                <td align="left" colspan="1" rowspan="1">0.078</td>
                                <td align="left" colspan="1" rowspan="1">63</td>
                                <td align="left" colspan="1" rowspan="1">0.062</td>
                                <td align="left" colspan="1" rowspan="1">71</td>
                                <td align="left" colspan="1" rowspan="1">0.054</td>
                                <td align="left" colspan="1" rowspan="1">75</td>
                                <td align="left" colspan="1" rowspan="1">0.049</td>
                                <td align="left" colspan="1" rowspan="1">77</td>
                            </tr>
                        </tbody>
                    </table>
                </table-wrap>
                <table-wrap id="T3" orientation="portrait" position="anchor">
                    <label>Table 3. </label>
                    <caption>
                        <title>Results of O.D. &amp; de-colorization (%) with different parameters at day 5.</title>
                    </caption>
                    <table content-type="article-table" frame="hsides">
                        <thead>
                            <tr>
                                <th colspan="1" rowspan="1"/>
                                <th align="center" colspan="2" rowspan="1">pH 5</th>
                                <th align="center" colspan="2" rowspan="1">pH 6</th>
                                <th align="center" colspan="2" rowspan="1">pH 7</th>
                                <th align="center" colspan="2" rowspan="1">pH 8</th>
                                <th align="center" colspan="2" rowspan="1">2% NaCl</th>
                                <th align="center" colspan="2" rowspan="1">4% NaCl</th>
                                <th align="center" colspan="2" rowspan="1">6% NaCl</th>
                                <th align="center" colspan="2" rowspan="1">8% NaCl</th>
                                <th align="center" colspan="2" rowspan="1">30&#x00b0;C</th>
                                <th align="center" colspan="2" rowspan="1">37&#x00b0;C</th>
                                <th align="center" colspan="2" rowspan="1">45&#x00b0;C</th>
                                <th align="center" colspan="2" rowspan="1">55&#x00b0;C</th>
                            </tr>
                        </thead>
                        <tbody>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Control</td>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0</td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">AO</td>
                                <td align="left" colspan="1" rowspan="1">0.031</td>
                                <td align="left" colspan="1" rowspan="1">77</td>
                                <td align="left" colspan="1" rowspan="1">0.040</td>
                                <td align="left" colspan="1" rowspan="1">73</td>
                                <td align="left" colspan="1" rowspan="1">0.018</td>
                                <td align="left" colspan="1" rowspan="1">90</td>
                                <td align="left" colspan="1" rowspan="1">0.051</td>
                                <td align="left" colspan="1" rowspan="1">59</td>
                                <td align="left" colspan="1" rowspan="1">0.031</td>
                                <td align="left" colspan="1" rowspan="1">81</td>
                                <td align="left" colspan="1" rowspan="1">0.054</td>
                                <td align="left" colspan="1" rowspan="1">60</td>
                                <td align="left" colspan="1" rowspan="1">0.072</td>
                                <td align="left" colspan="1" rowspan="1">43</td>
                                <td align="left" colspan="1" rowspan="1">0.075</td>
                                <td align="left" colspan="1" rowspan="1">37</td>
                                <td align="left" colspan="1" rowspan="1">0.025</td>
                                <td align="left" colspan="1" rowspan="1">82</td>
                                <td align="left" colspan="1" rowspan="1">0.008</td>
                                <td align="left" colspan="1" rowspan="1">93</td>
                                <td align="left" colspan="1" rowspan="1">0.040</td>
                                <td align="left" colspan="1" rowspan="1">72</td>
                                <td align="left" colspan="1" rowspan="1">0.053</td>
                                <td align="left" colspan="1" rowspan="1">59</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">CO</td>
                                <td align="left" colspan="1" rowspan="1">0.034</td>
                                <td align="left" colspan="1" rowspan="1">75</td>
                                <td align="left" colspan="1" rowspan="1">0.038</td>
                                <td align="left" colspan="1" rowspan="1">74</td>
                                <td align="left" colspan="1" rowspan="1">0.020</td>
                                <td align="left" colspan="1" rowspan="1">89</td>
                                <td align="left" colspan="1" rowspan="1">0.059</td>
                                <td align="left" colspan="1" rowspan="1">52</td>
                                <td align="left" colspan="1" rowspan="1">0.049</td>
                                <td align="left" colspan="1" rowspan="1">71</td>
                                <td align="left" colspan="1" rowspan="1">0.057</td>
                                <td align="left" colspan="1" rowspan="1">58</td>
                                <td align="left" colspan="1" rowspan="1">0.076</td>
                                <td align="left" colspan="1" rowspan="1">40</td>
                                <td align="left" colspan="1" rowspan="1">0.079</td>
                                <td align="left" colspan="1" rowspan="1">34</td>
                                <td align="left" colspan="1" rowspan="1">0.022</td>
                                <td align="left" colspan="1" rowspan="1">84</td>
                                <td align="left" colspan="1" rowspan="1">0.010</td>
                                <td align="left" colspan="1" rowspan="1">92</td>
                                <td align="left" colspan="1" rowspan="1">0.025</td>
                                <td align="left" colspan="1" rowspan="1">82</td>
                                <td align="left" colspan="1" rowspan="1">0.055</td>
                                <td align="left" colspan="1" rowspan="1">57</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">BG</td>
                                <td align="left" colspan="1" rowspan="1">0.042</td>
                                <td align="left" colspan="1" rowspan="1">80</td>
                                <td align="left" colspan="1" rowspan="1">0.055</td>
                                <td align="left" colspan="1" rowspan="1">85</td>
                                <td align="left" colspan="1" rowspan="1">0.051</td>
                                <td align="left" colspan="1" rowspan="1">92</td>
                                <td align="left" colspan="1" rowspan="1">0.089</td>
                                <td align="left" colspan="1" rowspan="1">73</td>
                                <td align="left" colspan="1" rowspan="1">0.019</td>
                                <td align="left" colspan="1" rowspan="1">89</td>
                                <td align="left" colspan="1" rowspan="1">0.045</td>
                                <td align="left" colspan="1" rowspan="1">72</td>
                                <td align="left" colspan="1" rowspan="1">0.070</td>
                                <td align="left" colspan="1" rowspan="1">62</td>
                                <td align="left" colspan="1" rowspan="1">0.099</td>
                                <td align="left" colspan="1" rowspan="1">40</td>
                                <td align="left" colspan="1" rowspan="1">0.031</td>
                                <td align="left" colspan="1" rowspan="1">86</td>
                                <td align="left" colspan="1" rowspan="1">0.025</td>
                                <td align="left" colspan="1" rowspan="1">90</td>
                                <td align="left" colspan="1" rowspan="1">0.035</td>
                                <td align="left" colspan="1" rowspan="1">84</td>
                                <td align="left" colspan="1" rowspan="1">0.075</td>
                                <td align="left" colspan="1" rowspan="1">58</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">CG</td>
                                <td align="left" colspan="1" rowspan="1">0.044</td>
                                <td align="left" colspan="1" rowspan="1">79</td>
                                <td align="left" colspan="1" rowspan="1">0.061</td>
                                <td align="left" colspan="1" rowspan="1">83</td>
                                <td align="left" colspan="1" rowspan="1">0.080</td>
                                <td align="left" colspan="1" rowspan="1">88</td>
                                <td align="left" colspan="1" rowspan="1">0.098</td>
                                <td align="left" colspan="1" rowspan="1">70</td>
                                <td align="left" colspan="1" rowspan="1">0.035</td>
                                <td align="left" colspan="1" rowspan="1">81</td>
                                <td align="left" colspan="1" rowspan="1">0.058</td>
                                <td align="left" colspan="1" rowspan="1">65</td>
                                <td align="left" colspan="1" rowspan="1">0.086</td>
                                <td align="left" colspan="1" rowspan="1">54</td>
                                <td align="left" colspan="1" rowspan="1">0.105</td>
                                <td align="left" colspan="1" rowspan="1">36</td>
                                <td align="left" colspan="1" rowspan="1">0.045</td>
                                <td align="left" colspan="1" rowspan="1">79</td>
                                <td align="left" colspan="1" rowspan="1">0.028</td>
                                <td align="left" colspan="1" rowspan="1">89</td>
                                <td align="left" colspan="1" rowspan="1">0.049</td>
                                <td align="left" colspan="1" rowspan="1">77</td>
                                <td align="left" colspan="1" rowspan="1">0.093</td>
                                <td align="left" colspan="1" rowspan="1">45</td>
                            </tr>
                        </tbody>
                    </table>
                </table-wrap>
            </sec>
            <sec>
                <title>Biochemical tests results</title>
                <p>AO, CO and CG isolates were gram -ve rod and AG and BG were +ve rod bacteria. BO and DO isolates were gram -ve cocci and DG was +ve coccoid. Other biochemical results (
                    <xref ref-type="table" rid="T4">Table 4</xref>) also showed all the isolates were catalase, oxidase, nitrate and aerobic growth positive. All were capable of tolerating 6.5% NaCl in media and withstand 45&#x00b0;C. All recorded negative results for urease, citrate, VP, starch hydrolysis and 10%, 15% NaCl tolerance. Motility, Indole, MR, Casein hydrolysis, 7% NaCl soln. tolerance, carbohydrate tests produced mixed results (A mixture of positive and negative results, which indicated the disparity of a wide range of characteristics in these primarily unidentified organisms) (
                    <xref ref-type="table" rid="T4">Table 4</xref>). Finally, software analysis using 
                    <ext-link ext-link-type="uri" xlink:href="http://www.tgw1916.net/bacteria_logare_desktop.html">ABIS</ext-link> (Version: July 29, 2015) based on morphology characteristics and biochemical tests postulated AO as 
                    <italic toggle="yes">Enterococcus termitis</italic>, BO as 
                    <italic toggle="yes">Enterococcus camelliae</italic>, CO as 
                    <italic toggle="yes">Bacillus farraginis</italic>, AG as 
                    <italic toggle="yes">Bacillus muralis</italic>, BG as 
                    <italic toggle="yes">Paenibacillus macerans</italic>, CG as 
                    <italic toggle="yes">Bacillus decolorationis</italic> and DG as 
                    <italic toggle="yes">Macrococcus brunensis</italic>. DO isolate remain unidentified.</p>
                <table-wrap id="T4" orientation="portrait" position="anchor">
                    <label>Table 4. </label>
                    <caption>
                        <title> Results of biochemical and sugar tests of the isolates collected from Nutrient agar.</title>
                    </caption>
                    <table content-type="article-table" frame="hsides">
                        <thead>
                            <tr>
                                <th align="left" colspan="1" rowspan="2" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">Isolate no</th>
                                <th align="left" colspan="1" rowspan="2" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">Sample Isolate Name</th>
                                <th align="center" colspan="2" rowspan="1" valign="top">Gram
                                    <break/>stain</th>
                                <th align="center" colspan="3" rowspan="1" valign="top">MIU</th>
                                <th align="center" colspan="9" rowspan="1" valign="top">Carbohydrate</th>
                                <th align="left" colspan="1" rowspan="2" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">Catalase</th>
                                <th align="left" colspan="1" rowspan="2" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">Oxidase</th>
                                <th align="left" colspan="1" rowspan="2" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">Simmons Citrate</th>
                                <th align="left" colspan="1" rowspan="2" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">MR</th>
                                <th align="left" colspan="1" rowspan="2" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">VP</th>
                                <th align="left" colspan="1" rowspan="2" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">Casein hydrolysis</th>
                                <th align="left" colspan="1" rowspan="2" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">Nitrate Reduction</th>
                                <th align="left" colspan="1" rowspan="2" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">Starch Hydrolysis</th>
                                <th align="left" colspan="1" rowspan="2" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">45&#x00b0; C</th>
                                <th align="left" colspan="1" rowspan="2" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">6.5% NaCl soln.</th>
                                <th align="left" colspan="1" rowspan="2" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">7% NaCl soln.</th>
                                <th align="left" colspan="1" rowspan="2" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">10% NaCl soln.</th>
                                <th align="left" colspan="1" rowspan="2" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">15% NaCl soln.</th>
                                <th align="left" colspan="1" rowspan="2" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">Aerobic Growth</th>
                                <th align="left" colspan="1" rowspan="2" valign="top">Presumptive Organism</th>
                            </tr>
                            <tr>
                                <th align="left" colspan="1" rowspan="1" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">+/-</th>
                                <th align="left" colspan="1" rowspan="1" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">Shape</th>
                                <th align="left" colspan="1" rowspan="1" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">Motility</th>
                                <th align="left" colspan="1" rowspan="1" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">Indole</th>
                                <th align="left" colspan="1" rowspan="1" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">Urease</th>
                                <th align="left" colspan="1" rowspan="1" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">Glucose</th>
                                <th align="left" colspan="1" rowspan="1" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">Fructose</th>
                                <th align="left" colspan="1" rowspan="1" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">Sucrose</th>
                                <th align="left" colspan="1" rowspan="1" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">Galactose</th>
                                <th align="left" colspan="1" rowspan="1" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">Lactose</th>
                                <th align="left" colspan="1" rowspan="1" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">Mannitol</th>
                                <th align="left" colspan="1" rowspan="1" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">Maltose</th>
                                <th align="left" colspan="1" rowspan="1" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">Trehalose</th>
                                <th align="left" colspan="1" rowspan="1" style="=-webkit-transform:rotate(-90deg);-moz-transform:rotate(-90deg);-o-transform:rotate(-90deg);transform:rotate(-90deg)" valign="top">Arabinose</th>
                            </tr>
                        </thead>
                        <tbody>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">1.</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">AO</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">rod</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <italic toggle="yes">Enterococcus termitis</italic>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">2.</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">BO</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">cocci</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
					
                                    <italic toggle="yes">Enterococcus camelliae</italic>
				</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">3. </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">CO</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">rod</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
					
                                    <italic toggle="yes">Bacillus farraginis</italic>
				</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">4.</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">DO</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">cocci</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
					
                                    <italic toggle="yes">Unknown texon</italic>
				</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">5.</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">AG</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">rod</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
					
                                    <italic toggle="yes">Bacillus muralis</italic>
				</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">6.</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">BG</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">rod</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
					
                                    <italic toggle="yes">Paenibacillus macerans</italic>
				</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">7.</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">CG</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">rod</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
					
                                    <italic toggle="yes">Bacillus decolorationis</italic>
				</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">8.</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">DG</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">cocci</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">-</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">+</td>
                                <td colspan="1" rowspan="1">
                                    <italic toggle="yes">Macrococcus brunensis</italic>
                                </td>
                            </tr>
                        </tbody>
                    </table>
                    <table-wrap-foot>
                        <fn>
                            <p>+ = Positive reaction; - = Negative reaction</p>
                        </fn>
                    </table-wrap-foot>
                </table-wrap>
                <supplementary-material id="DS0" orientation="portrait" position="float" xlink:href="https://f1000researchdata.s3.amazonaws.com/datasets/13757/813fb940-81e1-4457-b7a4-53a96405f0c7_Dataset_1.docx">
                    <label>Results of optical density (O.D) &amp; de-colorization (%) with different concentrations of dye. Average O.D. calculated from 1st and 2nd O.D</label>
                </supplementary-material>
                <supplementary-material id="DS1" orientation="portrait" position="float" xlink:href="https://f1000researchdata.s3.amazonaws.com/datasets/13757/8290d4e1-6f26-4e9d-af23-6beb654eb84c_Dataset_2.docx">
                    <label>Results of optical density (O.D) &amp; de-colorization (%) with different parameters at day 5. Average O.D. calculated from 1st and 2nd O.D</label>
                </supplementary-material>
            </sec>
        </sec>
        <sec sec-type="discussion">
            <title>Discussion</title>
            <p>Most of the isolates from the different soil samples were identified as 
                <italic toggle="yes">Bacillus</italic> species. Dye decolorizing ability of isolates was investigated independently. CO (
                <italic toggle="yes">B. farraginis</italic>) showed the highest dye decolorization capacity (98%) in SM broth media containing 1% OM2R dye for 5 days at 37&#x00b0;C. However, as the concentration of dye increased up to 3% and 5% the decolorization rate decreased to 94% and 90% respectively, because of the intensity of azo dyes. On GGS dye degradation BG (
                <italic toggle="yes">P. macerans</italic>) showed 97% decolorization. This was similarly effective at 3% dye concentration (94%), however, the rate was found to slump at 5% dye concentration (81%).</p>
            <p>pH is one of the important abiotic factors that affect the growth and metabolic homeostasis. The effect was studied at different pH values (5 &#x2013; 8). At pH 7.0 AO (
                <italic toggle="yes">E. termitis</italic>) gave maximum decolorization (90%). A similar rate was observed over the pH range of 5.0 and 6.0, with a swift reduction (59%) observed at pH 8 by AO (
                <italic toggle="yes">E. termitis</italic>). These results suggest that acidic pH values may influence the stability of the enzyme causing denaturation. Chang 
                <italic toggle="yes">et al.</italic> (2001)
                <sup>
                    <xref ref-type="bibr" rid="ref-14">14</xref>
                </sup> found that azo reductase performance was affected by pH, with 2.5 times better dye reduction at pH 7 - 9 than below pH 7. These findings corresponded well to the best decolorization found between pH 7 - 9.5
                <sup>
                    <xref ref-type="bibr" rid="ref-29">29</xref>
                </sup>.</p>
            <p>In the case of GGS, the maximum decolorization rate was attained at pH 7.0 by BG (
                <italic toggle="yes">P. macerans</italic>) at 92%. The majority of the azo dye reducing bacterial species reported so far were able to reduce the dye at pH near 7
                <sup>
                    <xref ref-type="bibr" rid="ref-30">30</xref>&#x2013;
                    <xref ref-type="bibr" rid="ref-32">32</xref>
                </sup>. The requirement of near neutral pH for optimum growth had been reported in several studies
                <sup>
                    <xref ref-type="bibr" rid="ref-33">33</xref>&#x2013;
                    <xref ref-type="bibr" rid="ref-35">35</xref>
                </sup>. Results indicate that a pH increase from 5.0 to 7.0 enhanced the decolorization of GGS dyes. At pH 5 the decolorization rate was 80% of dye by BG (
                <italic toggle="yes">P. macerans</italic>). A small increase was observed at pH 6 (85%) with an abrupt decrease at pH 8.0 (73%). It was observed that better decolorization rates were around pH 6 - 7 bands for both of OM2R and GGS dye by the selected isolates.</p>
            <p>Decolorization percentage of OM2R by selected isolates was found to vary with different concentration (2 - 8 g/L) of NaCl when studied for 120 hours at 37&#x00b0;C. Maximum decolorization of OM2R by AO (
                <italic toggle="yes">E. termitis</italic>) was observed as 81% at 2% NaCl, but the percentage decolorization was found to decrease with increases of NaCl concentration (
                <xref ref-type="table" rid="T3">Table 3</xref>; 
                <xref ref-type="other" rid="DS1">Dataset 2</xref>
                <sup>
                    <xref ref-type="bibr" rid="ref-28">28</xref>
                </sup>). The decolorization attained by AO (
                <italic toggle="yes">E. termitis</italic>) at 37&#x00b0;C for 4%, 6% and 8% NaCl was 60%, 43%, and 37%. Kargi and Dincer (1996)
                <sup>
                    <xref ref-type="bibr" rid="ref-36">36</xref>
                </sup> mention that high salt concentrations (&gt;1% salt) are known to cause plasmolysis and/or loss of cell activity.</p>
            <p>Similarly, at 2% NaCl concentration the degradation percentage of GGS dye was 89% by BG (
                <italic toggle="yes">P. macerans</italic>). The decolorization attained by BG (
                <italic toggle="yes">P. macerans</italic>) at 37&#x00b0;C for 4%, 6% and 8% NaCl was 72%, 62%, and 40% (
                <xref ref-type="table" rid="T3">Table 3</xref>; 
                <xref ref-type="other" rid="DS1">Dataset 2</xref>
                <sup>
                    <xref ref-type="bibr" rid="ref-28">28</xref>
                </sup>).</p>
            <p>To determine the optimum temperature for dye decolorization a temperature range of 30&#x00b0;C &#x2013;55&#x00b0;C was examined. As seen in 
                <xref ref-type="table" rid="T3">Table 3</xref> the optimum temperature for OM2R dye decolorization was 37&#x00b0;C for the AO (
                <italic toggle="yes">E. termitis</italic>) attained a maximum decolorization of 93%. Angelova 
                <italic toggle="yes">et al.</italic> (2008)
                <sup>
                    <xref ref-type="bibr" rid="ref-37">37</xref>
                </sup> found that the azo bond reduction rate rose with an increased temperature, a maximum rate of around 40&#x00b0;C, 3&#x2013;5 times faster than at 20&#x00b0;C. At 30&#x00b0;C and 45&#x00b0;C the degradation rate for OM2R by AO 
                <italic toggle="yes">E. termitis</italic> was 82% and 72% of dye. A low decolorization of 59% of the dye was detected at 55&#x00b0;C by AO (
                <italic toggle="yes">E. termitis</italic>) isolate. Temperatures above 55&#x00b0;C were not studied since results shown that the increase from 37&#x00b0;C to 45&#x00b0;C promoted a marginal decrease in dye decolorization (
                <xref ref-type="table" rid="T3">Table 3</xref>; 
                <xref ref-type="other" rid="DS1">Dataset 2</xref>
                <sup>
                    <xref ref-type="bibr" rid="ref-28">28</xref>
                </sup>).</p>
            <p>The optimum temperature for GGS dye decolorization was 37&#x00b0;C for the BG isolate (
                <italic toggle="yes">P. macerans</italic>), attaining a maximum decolorization of 90% of dye. In the case of BG, at 30&#x00b0;C and 45&#x00b0;C the decolorization percentage was 86% and 84% of dye respectively. No improvement in dye decolorization was observed at temperatures above 45&#x00b0;C, with low decolorization of 58% and 45% of dye detected at 55&#x00b0;C by BG (
                <italic toggle="yes">P. macerans</italic>) isolate as evident from 
                <xref ref-type="table" rid="T3">Table 3</xref>. BG (
                <italic toggle="yes">P. macerans</italic>) has a broad range of compatibility from 30&#x00b0;C to 45&#x00b0;C. Within the optimal values of temperature, the lowest temperature was selected as the optimum temperature since this leads to lower energy costs.</p>
        </sec>
        <sec sec-type="conclusions">
            <title>Conclusion</title>
            <p>Traditional wastewater treatment is inefficient and remains a threat to environment
                <sup>
                    <xref ref-type="bibr" rid="ref-38">38</xref>
                </sup>. Biotreatment offers an easy, cheap and effective alternative for color removal of textile dyes
                <sup>
                    <xref ref-type="bibr" rid="ref-39">39</xref>
                </sup>. Hence, economic and eco-friendly techniques using bacteria can be an alternative method. The present study strongly concluded that the bacterial isolates 
                <italic toggle="yes">E. termitis</italic>, 
                <italic toggle="yes">E. camelliae</italic>, 
                <italic toggle="yes">B. decolorationis</italic>, 
                <italic toggle="yes">P. macerans</italic> species were a good microbial source for textile effluent treatment, in biological degradation of textile dye. However, decolorization potential of the isolates needs to be validated by demonstration in appropriate bioreactors before its application.</p>
        </sec>
        <sec>
            <title>Data availability</title>
            <p>The data referenced by this article are under copyright with the following copyright statement: Copyright: &#x00ef;&#x00bf;&#x00bd; 2018 Rahman SS et al.</p>
            <p>Data associated with the article are available under the terms of the Creative Commons Zero "No rights reserved" data waiver (CC0 1.0 Public domain dedication).
                <ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/publicdomain/zero/1.0/"/>
            </p>
            <p>Dataset 1: Results of optical density (O.D) &amp; de-colorization (%) with different concentrations of dye. Average O.D. calculated from 1st and 2nd O.D. 
                <ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.5256/f1000research.13757.d198164">10.5256/f1000research.13757.d198164</ext-link>
                <sup>
                    <xref ref-type="bibr" rid="ref-27">27</xref>
                </sup>
            </p>
            <p>Dataset 2: Results of optical density (O.D) &amp; de-colorization (%) with different parameters at day 5. Average O.D. calculated from 1st and 2nd O.D. 
                <ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.5256/f1000research.13757.d198165">10.5256/f1000research.13757.d198165</ext-link>
                <sup>
                    <xref ref-type="bibr" rid="ref-28">28</xref>
                </sup>
            </p>
        </sec>
    </body>
    <back>
        <ack>
            <title>Acknowledgements</title>
            <p>Authors are grateful to (Late) Prof. Dr. A. A. Ziauddin Ahmad and Prof. Naiyyum Choudhury of Department of MNS, BRAC University, Dhaka, for their cooperation and support. Their sincere appreciation goes to Dr. Md. Sorowar Hossain, Dr. Aparna Islam, Jebunnesa Chowdhury and Romana Siddique for drawing novel thoughts. And, grateful to Shaan Mahameed, Asma Binte Afzal, Mashiat Nawar Chowdhury, Ahmed Abdullah Fahim, Hasan Hasnain Ahmed, Fatima Labonya and Sadia Zaman Shormy for their unremitting help.</p>
        </ack>
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