<p>Transitioning to new PDB IDs and PDBx/mmCIF format at the Protein Data Bank</p>

Irina Persikova; Zukang  Feng; Yuhe Liang; Ezra Peisach; Jasmine Y Young; The Worldwide Protein Data Bank (wwPDB) Team; Stephen K Burley

doi:10.7490/f1000research.1120118.1

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Persikova I, Feng Z, Liang Y et al. Transitioning to new PDB IDs and PDBx/mmCIF format at the Protein Data Bank [version 1; not peer reviewed]. F1000Research 2025, 14:350 (poster) (https://doi.org/10.7490/f1000research.1120118.1)

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Transitioning to new PDB IDs and PDBx/mmCIF format at the Protein Data Bank

Irina Persikova¹, Zukang Feng, Yuhe Liang, Ezra Peisach, Jasmine Y Young, The Worldwide Protein Data Bank (wwPDB) Team, Stephen K Burley

Published 28 Mar 2025 (https://doi.org/10.7490/f1000research.1120118.1)

Author Affiliations

¹ Research Collaboratory for Structural Bioinformatics Protein Data Bank, Piscataway Township, New Jersey, USA

Copyright © 2025 Persikova I et al. This is an open access work distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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CITE

Published 28 Mar 2025

Transitioning to new PDB IDs and PDBx/mmCIF format at the Protein Data Bank
[version 1; not peer reviewed]

Irina Persikova¹, Zukang Feng, Yuhe Liang, Ezra Peisach, Jasmine Y Young, The Worldwide Protein Data Bank (wwPDB) Team, Stephen K Burley

Author Affiliations

¹ Research Collaboratory for Structural Bioinformatics Protein Data Bank, Piscataway Township, New Jersey, USA

Presented at

18th Annual International Biocuration Conference 2025

Abstract

Competing Interests

No competing interests were disclosed

Keywords

Protein Data Bank (PDB), Worldwide Protein Data Bank (wwPDB), Extended PDB IDs, PDBx/mmCIF format, Scientific data repositories, Data format transition, Data accessibility, FAIR data principles, Structural biology, Biological macromolecules, Educational resources

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