<p>BioXSD | BioJSON | BioYAML – Towards unified formats for sequences, alignments, features, and annotations</p>

Matúš Kalaš; Sveinung Gundersen; László Kaján; Hervé Ménager; Jon Ison; Christophe Blanchet; Steve Pettifer; Rodrigo Lopez; Kristoffer Rapacki; Inge Jonassen

doi:10.7490/f1000research.1113048.1

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Kalaš M, Gundersen S, Kaján L et al. BioXSD | BioJSON | BioYAML – Towards unified formats for sequences, alignments, features, and annotations [version 1; not peer reviewed]. F1000Research 2016, 5:2213 (poster) (https://doi.org/10.7490/f1000research.1113048.1)

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BioXSD | BioJSON | BioYAML – Towards unified formats for sequences, alignments, features, and annotations

Matúš Kalaš¹, Sveinung Gundersen, László Kaján, Hervé Ménager, Jon Ison, Christophe Blanchet, Steve Pettifer, Rodrigo Lopez, Kristoffer Rapacki, Inge Jonassen

Published 05 Sep 2016 (https://doi.org/10.7490/f1000research.1113048.1)

Author Affiliations

¹ University of Bergen, Norway

Copyright © 2016 Kalaš M et al. This is an open access work distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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CITE

Published 05 Sep 2016

BioXSD | BioJSON | BioYAML – Towards unified formats for sequences, alignments, features, and annotations
[version 1; not peer reviewed]

Matúš Kalaš¹, Sveinung Gundersen, László Kaján, Hervé Ménager, Jon Ison, Christophe Blanchet, Steve Pettifer, Rodrigo Lopez, Kristoffer Rapacki, Inge Jonassen

Author Affiliations

¹ University of Bergen, Norway

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European Conference on Computational Biology (ECCB) 2016

Abstract

Competing Interests

No competing interests were disclosed

Keywords

Bioinformatics data, interoperability, integrative bioinformatics, biomolecular sequence data, sequence alignment, sequence features, sequence annotation, BioXSD, BioJSON, BioYAML, XML, XML Schema, XSD, JSON, JSON Schema, YAML, data model, exchange format

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