<p>Combining transcription factor affinities and open chromatin data for accurate gene expression prediction</p>

Florian Schmidt; Nina Gasparoni; Gilles Gasparoni; Kathrin Gianmoena; Cristina Cadenas; Julia K.  Polansky; Peter Ebert; Karl Nordström; Matthias Barann; Anupam Sinha; Sebastian Fröhler; Jieyi Xiong; Azim Dehghani Amirabad; Fatemeh Behjati Ardakani; Barbara Hutter; Gideon Zipprich; Bärbel Felder; Jürgen Eils; Benedikt Brors; Wei Chen; Jan G. Hengstler; Alf Hamann; Thomas Lengauer; Philip Rosenstiel; Jörn Walter; Marcel H. Schulz

doi:10.7490/f1000research.1113166.1

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Schmidt F, Gasparoni N, Gasparoni G et al. Combining transcription factor affinities and open chromatin data for accurate gene expression prediction [version 1; not peer reviewed]. F1000Research 2016, 5:2358 (poster) (https://doi.org/10.7490/f1000research.1113166.1)

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Combining transcription factor affinities and open chromatin data for accurate gene expression prediction

Florian Schmidt¹, Nina Gasparoni, Gilles Gasparoni, Kathrin Gianmoena, Cristina Cadenas, Julia K. Polansky, Peter Ebert, Karl Nordström, Matthias Barann, Anupam Sinha, Sebastian Fröhler, Jieyi Xiong, Azim Dehghani Amirabad, Fatemeh Behjati Ardakani, Barbara Hutter, Gideon Zipprich, Bärbel Felder, Jürgen Eils, Benedikt Brors, Wei Chen, Jan G. Hengstler, Alf Hamann, Thomas Lengauer, Philip Rosenstiel, Jörn Walter, Marcel H. Schulz

Published 23 Sep 2016 (https://doi.org/10.7490/f1000research.1113166.1)

Author Affiliations

¹ Saarland University, Germany

Copyright © 2016 Schmidt F et al. This is an open access work distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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CITE

Published 23 Sep 2016

Combining transcription factor affinities and open chromatin data for accurate gene expression prediction
[version 1; not peer reviewed]

Author Affiliations

¹ Saarland University, Germany

Presented at

15th European Conference on Computational Biology (ECCB) 2016

Abstract

Competing Interests

No competing interests were disclosed

Keywords

transcription factors, open chromatin, gene regulation, gene expression, DNase-seq, NOMe-seq

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