<p>MicrobiomeExperiment and the emerging R ecosystem for microbiome research</p>

Felix G.M. Ernst; Sudarshan A Shetty; Ruizhu Huang; Domenick J Braccia; Hector Corrada Bravo; Leo M Lahti

doi:10.7490/f1000research.1118445.1

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Ernst FGM, Shetty SA, Huang R et al. MicrobiomeExperiment and the emerging R ecosystem for microbiome research [version 1; not peer reviewed]. F1000Research 2020, 9:1459 (poster) (https://doi.org/10.7490/f1000research.1118445.1)

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MicrobiomeExperiment and the emerging R ecosystem for microbiome research

Felix G.M. Ernst¹, Sudarshan A Shetty², Ruizhu Huang³, Domenick J Braccia⁴, Hector Corrada Bravo⁴, Leo M Lahti⁵

Published 15 Dec 2020 (https://doi.org/10.7490/f1000research.1118445.1)

Author Affiliations

¹ German Center for Neurodegenerative Diseases, Germany
² University Medical Center, Utrecht, The Netherlands
³ University of Zurich, Switzerland
⁴ University of Maryland, College Park, USA
⁵ University of Turku, Finland

Copyright © 2020 Ernst FGM et al. This is an open access work distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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CITE

Published 15 Dec 2020

MicrobiomeExperiment and the emerging R ecosystem for microbiome research
[version 1; not peer reviewed]

Felix G.M. Ernst¹, Sudarshan A Shetty², Ruizhu Huang³, Domenick J Braccia⁴, Hector Corrada Bravo⁴, Leo M Lahti⁵

Author Affiliations

Presented at

European Bioconductor Meeting 2020

Abstract

Competing Interests

No competing interests were disclosed

Keywords

microbiome, metagenomics, multiomics, R, Bioconductor, analysis, SummarizedExperiment, pipeline, workflow

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