<p>Microbiome data science in the <i>SummarizedExperiment</i> universe</p>

Leo Lahti; Felix G.M. Ernst; Sudarshan A Shetty; Tuomas Borman; Ruizhu Huang; Domenick J Braccia; Hector Corrada Bravo; The miaverse collective

doi:10.7490/f1000research.1118712.1

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Lahti L, Ernst FGM, Shetty SA et al. Microbiome data science in the SummarizedExperiment universe [version 1; not peer reviewed]. F1000Research 2021, 10:748 (slides) (https://doi.org/10.7490/f1000research.1118712.1)

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Microbiome data science in the SummarizedExperiment universe

Leo Lahti¹, Felix G.M. Ernst, Sudarshan A Shetty, Tuomas Borman, Ruizhu Huang, Domenick J Braccia, Hector Corrada Bravo, The miaverse collective

Published 04 Aug 2021 (https://doi.org/10.7490/f1000research.1118712.1)

Author Affiliations

¹ University of Turku, Finland

Copyright © 2021 Lahti L et al. This is an open access work distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Published 04 Aug 2021

Microbiome data science in the SummarizedExperiment universe
[version 1; not peer reviewed]

Leo Lahti¹, Felix G.M. Ernst, Sudarshan A Shetty, Tuomas Borman, Ruizhu Huang, Domenick J Braccia, Hector Corrada Bravo, The miaverse collective

Author Affiliations

¹ University of Turku, Finland

Presented at

Bioconductor Virtual Conference 2021

Abstract

Competing Interests

No competing interests were disclosed

Keywords

microbiome, data container, hierarchical data, multi-assay, metagenomics, data integration

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Microbiome data science in the SummarizedExperiment universe

Microbiome data science in the SummarizedExperiment universe [version 1; not peer reviewed]

Terms relating to user comments

Microbiome data science in the SummarizedExperiment universe
[version 1; not peer reviewed]