<p>Streamlining the user experience for reproducible image analysis in Galaxy</p>

Armin Dadras; Leonid Kostrykin; Beatriz Serrano-Solano; Riccardo Massei; Karl Rohr

doi:10.7490/f1000research.1120335.1

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Dadras A, Kostrykin L, Serrano-Solano B et al. Streamlining the user experience for reproducible image analysis in Galaxy [version 1; not peer reviewed]. F1000Research 2025, 14:1080 (slides) (https://doi.org/10.7490/f1000research.1120335.1)

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Streamlining the user experience for reproducible image analysis in Galaxy

Armin Dadras, Leonid Kostrykin¹, Beatriz Serrano-Solano, Riccardo Massei, Karl Rohr

Published 13 Oct 2025 (https://doi.org/10.7490/f1000research.1120335.1)

Author Affiliations

¹ Heidelberg University, Heidelberg, Germany

Copyright © 2025 Dadras A et al. This is an open access work distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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CITE

Published 13 Oct 2025

Streamlining the user experience for reproducible image analysis in Galaxy
[version 1; not peer reviewed]

Armin Dadras, Leonid Kostrykin¹, Beatriz Serrano-Solano, Riccardo Massei, Karl Rohr

Author Affiliations

¹ Heidelberg University, Heidelberg, Germany

Presented at

European Galaxy Days

Competing Interests

No competing interests were disclosed

Keywords

Galaxy, reproducible image analysis, user experience, interoperability, OMERO, GeoJSON, Cellpose, SuperDSM, BioImage.IO, TIFF metadata, Docker, virtualization, QuPath annotations

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