<p>SPEAQeasy: a Scalable Pipeline for Expression Analysis and Quantification for R/Bioconductor-powered RNA-seq analyses</p>

Nick Eagles; Emily Burke; Jacob Leonard; Brianna Barry; Joshua Stolz; Louise Huuki; BaDoi Phan; Violeta Serrato; Everardo Gutiérrez-Millán; Israel Aguilar-Ordoñez; Andrew Jaffe; Leonardo Collado Torres

doi:10.7490/f1000research.1118446.1

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Eagles N, Burke E, Leonard J et al. SPEAQeasy: a Scalable Pipeline for Expression Analysis and Quantification for R/Bioconductor-powered RNA-seq analyses [version 1; not peer reviewed]. F1000Research 2020, 9:1463 (slides) (https://doi.org/10.7490/f1000research.1118446.1)

NOTE: it is important to ensure the information in square brackets after the title is included in this citation.

SPEAQeasy: a Scalable Pipeline for Expression Analysis and Quantification for R/Bioconductor-powered RNA-seq analyses

Nick Eagles¹, Emily Burke, Jacob Leonard, Brianna Barry, Joshua Stolz, Louise Huuki, BaDoi Phan, Violeta Serrato, Everardo Gutiérrez-Millán, Israel Aguilar-Ordoñez, Andrew Jaffe, Leonardo Collado Torres

Published 15 Dec 2020 (https://doi.org/10.7490/f1000research.1118446.1)

Author Affiliations

¹ Lieber Institute for Brain Development, USA

Copyright © 2020 Eagles N et al. This is an open access work distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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CITE

Published 15 Dec 2020

SPEAQeasy: a Scalable Pipeline for Expression Analysis and Quantification for R/Bioconductor-powered RNA-seq analyses
[version 1; not peer reviewed]

Author Affiliations

¹ Lieber Institute for Brain Development, USA

Presented at

European Bioconductor Meeting 2020

Abstract

Competing Interests

No competing interests were disclosed

Keywords

pipeline, nextflow, RNA-seq, bioconductor, differential expression

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