GenomeSpace

GenomeSpace

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1-4 of 4 ARTICLES
 in 
https://doi.org/10.12688/f1000research.16290.1
Method Article metrics
A unified GenomeSpace recipe to identify essential genes and associated subnetworks from Genome-Scale CRISPR-Cas9 knockout screens
[version 1; peer review: 2 approved with reservations]
Daniel E. Carlin, Forrest Kim, Trey Ideker, Jill P. Mesirov
Peer Reviewers Shouhong Guang; Xiaowei Wang
  • Funder
  • National Human Genome Research Institute
PUBLISHED 12 Oct 2018
https://doi.org/10.12688/f1000research.11616.2
Method Article metrics
Revised
A multi-tool recipe to identify regions of protein-DNA binding and their influence on associated gene expression
[version 2; peer review: 2 approved]
Daniel E. Carlin, Kassi Kosnicki, Sara Garamszegi, Trey Ideker, Helga Thorvaldsdóttir, Michael Reich, Jill P. Mesirov
Peer Reviewers Isha Sethi; Andrew D Sharrocks and Munazah Andrabi
  • Funder
  • National Human Genome Research Institute
LATEST VERSION PUBLISHED 30 Jan 2018
https://doi.org/10.12688/f1000research.6644.1
Software Tool Article metrics
Constellation Map: Downstream visualization and interpretation of gene set enrichment results
[version 1; peer review: 2 approved]
Yan Tan, Felix Wu, Pablo Tamayo, W. Nicholas Haining, Jill P. Mesirov
Peer Reviewers Hilary Ann Coller; Sayan Mukherjee
PUBLISHED 24 Jun 2015
https://doi.org/10.12688/f1000research.4492.2
Software Tool Article metrics
Revised
Cytoscape: the network visualization tool for GenomeSpace workflows
[version 2; peer review: 3 approved]
Barry Demchak, Tim Hull, Michael Reich, Ted Liefeld, Michael Smoot, Trey Ideker, Jill P. Mesirov
Peer Reviewers Aris Floratos; Gabriela Bindea and Bernhard Mlecnik; Jan Aerts
LATEST VERSION PUBLISHED 26 Aug 2014
1-4 of 4 ARTICLES
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