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Case Report
Revised

Case Report: Acute pyelonephritis and hearing loss in scrub typhus

[version 2; peer review: 2 approved]
PUBLISHED 05 Jul 2019
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Abstract

Acute pyelonephritis is a common renal manifestation in patients with diabetes. A 52-year-old diabetic lady presented with loin pain, dysuria, and fever and urinary incontinence that had begun seven and three days prior to presentation respectively. She was treated with escalating spectra of intravenous antibiotics without improvement. Urine and blood cultures were sterile, while radiological investigations were suggestive of pyelonephritis. Mild hepatic dysfunction prompted consideration of scrub typhus and she improved with empirical doxycycline. Scrub IgM was later confirmed to be positive. In conclusion, local prevalence of systemic infections such as rickettsioses should always be considered in diabetics with fever, even if symptoms and signs otherwise suggest typical diabetes-related infections. We, therefore report a case of acute pyelonephritis caused by scrub typhus which has not been previously described in English medical literature.

Keywords

scrub typhus, acute pyelonephritis, urinary tract infection, hearing loss

Revised Amendments from Version 1

The differences are minor. History of alcohol, past treatment and hospitalizations have been mentioned. Scrub IgM kit was used and the cutoff/diagnostic values have been mentioned.

See the authors' detailed response to the review by Tri Wangrangsimakul
See the authors' detailed response to the review by Dharshan Rangaswamy and Ravindra Prabhu Attur

Introduction

Among patients with diabetes mellitus, the urinary tract is the most common site of infection1. Urinary tract infections (UTI) are either related to the upper or lower urinary tract. Acute and chronic pyelonephritis are upper UTIs1. Bacteria (Escherichia coli), viruses (Adenovirus), fungi (Mucor), and mycobacteria (Mycobacterium tuberculosis) commonly cause upper UTIs in diabetes1. Orientia tsutsugamushi (scrub typhus) has never been reported to cause pyelonephritis in English medical literature.

Case report

A 52-year-old grandmother of Indian origin, non-compliant to insulin for six months, presented to the Emergency Department of our hospital with fever and rigors, vomiting, headache, bilateral leg pain and myalgia, which had persisted for one week and urinary incontinence for the prior three days. She was unemployed, did not consume alcohol and had had no exposure to rodents or mite bites. Apart from over-the-counter antipyretics, she had neither consulted a health practitioner nor had she received antibiotics. On examination, she was conscious, oriented, toxic, febrile, drowsy, dehydrated with slurred speech, with body-mass index 20.2 kg/m2, tachycardia, orthostatic hypotension, diminished hearing, with right renal angle fullness and tenderness. Initial investigations (Table 1) revealed random sugars 435mg/dL, normal renal functions, ketonuria and glycosuria without pyuria, sinus tachycardia (electrocardiogram), and normal echocardiography. There were no malarial parasites on the peripheral smear. Arterial blood gas showed respiratory alkalosis with metabolic acidosis. Intravenous ceftriaxone 2g OD, intravenous fluids, insulin, acetaminophen 500mg three times a day, multivitamins (B12 1000µg, thiamine 100mg, pyridoxine 100mg, riboflavin 5mg and folate 5mg), pantoprazole 40mg, and domperidone 10mg were commenced for probable acute pyelonephritis. On day 3, piperacillin/tazobactam 4.5g every 8 hours and fluconazole 300mg once a day (OD) were substituted for ceftriaxone 2 g OD; oral amitriptyline 25mg was added to treat the patient’s painful neuropathy.

Table 1. Investigations of the patient during hospital stay and follow-up.

Normal ranges for each test are provided. ESR - erythrocyte sedimentation rate.

Day 1Day 3Day 5Day 7Follow up
Sodium (136–142 mmol/ L)125129
Total bilirubin) (1.1–2.4mg/dL)1.872.25
Direct bilirubin (0.1–0.4mg/dL)0.30.4
Total protein (6.3–7.9g/dL) 5.2 6.9
Albumin (3.5–5.5g/dL) 2.8 3.8
Aspartate aminotransferase (12–38U/L)17572
Alanine aminotransferase (7–40U/L)6463
Alkaline phosphatase (35–100U/L)299262
Creatinine (0.5–0.9mg/dL)0.9
Hemoglobin (11.7–15.7g/dL)10.89.08.97.2
Total leukocyte count (4–11 ×10⁹/L)13.18.97.06.8
Platelets (150–450 ×10⁹/L)202311362368
ESR (0–20 mm/hour)1129040

Blood and urine cultures were sterile. Ultrasonogram showed hepatomegaly and bilateral bulky kidneys. She developed diarrhea on day 4. Hence, piperacillin was discontinued after 36hrs even though there appeared to be a partial defervescence; diarrhea subsided after discontinuing piperacillin. Her toxemia and prostration persisted, and she needed assistance to the toilet in view of extreme weakness, but had no focal neurological deficits. On day 5, she was initiated on meropenem 1g every 8 hours and linezolid 600mg every 12 hours for persisting fever (Figure 1A). Liver function tests showed elevated transaminases; hence probable rickettsioses was suspected and empirical doxycycline 100mg twice a day was initiated on day 6. The next day, Scrub Typhus Detect IgM (InBios International) done at a private laboratory returned positive with an OD of 1.732 (Cut-off: <0.500). Intravenous antibiotics were therefore discontinued and there was no recurrence of fever thereafter.

94af17d3-7be6-4588-bfd4-a43247e2efc6_figure1.gif

Figure 1.

(A) Fever spikes plotted from day 1 to day 5. (B) Computed tomography scan revealing bilateral renomegaly and mild fat stranding in the right kidney.

Abdominal computed tomography (CT) on the 8th day showed bilateral bulky kidneys with mild perinephric fat stranding (Figure 1B), thus confirming the provisional diagnosis. The pancreas was normal. She also had left-sided proliferative diabetic retinopathy and bilateral sensorineural hearing loss (average of 75dB and 90dB in the right and left ear respectively). She then completed a 7-day course of doxycycline 100mg twice a day and was advised another week’s therapy at home. She had had no fever thereafter. On follow up, liver function test (LFT) had improved (Table 1), as did her hearing (47 dB in the right and 87 dB in the left) which favored our diagnosis of probable acute scrub typhus.

Discussion

Diabetes mellitus, due to hyperglycemia, ketoacidosis, vascular insufficiency, and impaired neutrophil and monocyte function, makes patients prone to UTIs1. Diagnosis of acute pyelonephritis (APN) clinically is a syndrome of fever, chills, vomiting, and flank pain associated with pyuria, and is often radiologically confirmed2. In a prospective study, only 1/4th patients had a positive urine culture and only 65% had pyuria2, echoing the findings in our patient. In total, 14 among 223 patients had diabetes. Even though our patient did not have pyuria, symptoms/signs in a poorly controlled diabetic led us to a diagnosis of APN and empirical treatment was instituted for the same. Renal abnormalities in scrub typhus range from simple proteinuria/hematuria to acute kidney injury and occasionally, chronic kidney disease3. Our patient had glycosuria and positive microalbuminuria (92µg/mg). Mechanisms postulated for renal involvement include rickettsiae-related vasculitis, tubular interstitial proliferation, and tubular necrosis3. APN in scrub typhus has been reported only once, in Chinese medical literature in a 56-year-old Chinese lady who had urgency, flank pain and an eschar4.

Diabetes is a risk factor for scrub typhus-induced acute kidney injury. Since leukocytosis reduced with ceftriaxone without adequate fever response, we presumed poor control of bacterial/fungal infection and treated her with fluconazole and piperacillin/tazobactum. Since LFT could not be performed prior to day 4 due to technical reasons, rickettsioses were not suspected. Even though our locality is a high-prevalence area for scrub typhus, focal renal signs and symptoms led us to think otherwise5. A convalescent titer of Scrub IgM could not be done due to its unavailability and need for out-of-pocket expenses. PCR was not available. We also erred in contributing her hearing impairment to be the result of her toxemia and poor health. Pure tone audiometry was done 48 hours after doxycycline when the patient became self-ambulatory. Improvement of her hearing loss, albeit partial, two weeks after discharge suggests that scrub typhus could have also contributed to her hearing impairment6. Abdominal CT was also done after doxycycline therapy-whether findings are milder than expected is also debatable. Hypoalbuminemia and rapidly falling hemoglobin over seven days without overt blood or volume loss, could be attributed to hemoconcentration following scrub typhus-related capillary leak syndrome that was observed at initial presentation, and reverted to premorbid levels after fluid supplementation and antibiotics. In retrospect, fever, absence of pyuria, sterile urine, capillary leak syndrome, primary respiratory alkalosis, and hearing loss in a patient with high sugars and ketonuria should have made us think of an alternative etiological diagnosis. The pattern of LFT derangement did not suggest a biliary infection and pancreatic imaging was normal. Also, fever did not recur after initiating doxycycline and discontinuing other intravenous antibiotics which would favor a rickettsial infection rather than a systemic bacterial sepsis.

UTIs in diabetes are common, but scrub typhus as a probable cause of UTI/pyelonephritis has hitherto been unreported in English medical literature. Atypical organisms causing pyelonephritis should be considered in patients with multisystem involvement and in those with a UTI but without pyuria. Furthermore, local prevalence of systemic infections such as rickettsioses should always be considered in diabetics with fever, even if symptoms and signs otherwise suggest typical diabetes-related infections.

Consent

Written informed consent for publication of their clinical details and clinical images were obtained from the patient.

Data availability

All data underlying the results are available as part of the article and no additional source data are required.

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Version 2
VERSION 2 PUBLISHED 20 Mar 2019
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how to cite this article
Venketesan S, Jain D, Viswanathan S and Gayathri MS. Case Report: Acute pyelonephritis and hearing loss in scrub typhus [version 2; peer review: 2 approved]. F1000Research 2019, 8:312 (https://doi.org/10.12688/f1000research.18129.2)
NOTE: If applicable, it is important to ensure the information in square brackets after the title is included in all citations of this article.
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Key to Reviewer Statuses VIEW
ApprovedThe paper is scientifically sound in its current form and only minor, if any, improvements are suggested
Approved with reservations A number of small changes, sometimes more significant revisions are required to address specific details and improve the papers academic merit.
Not approvedFundamental flaws in the paper seriously undermine the findings and conclusions
Version 2
VERSION 2
PUBLISHED 05 Jul 2019
Revised
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7
Cite
Reviewer Report 05 Jul 2019
Tri Wangrangsimakul, Mahidol-Oxford Tropical Medicine Research Unit, Faculty of Tropical Medicine, Mahidol University, Bangkok, Thailand;  Centre for Tropical Medicine and Global Health, Nuffield Department of Clinical Medicine, University of Oxford, Oxford, UK 
Approved
VIEWS 7
The authors have revised the article and provided further useful information that improves the overall quality of the report. The lack of a convalescent sample for serological testing or other confirmatory tests remain a weakness. However, the additional details on risk factors and diagnostic ... Continue reading
CITE
CITE
HOW TO CITE THIS REPORT
Wangrangsimakul T. Reviewer Report For: Case Report: Acute pyelonephritis and hearing loss in scrub typhus [version 2; peer review: 2 approved]. F1000Research 2019, 8:312 (https://doi.org/10.5256/f1000research.21739.r50808)
NOTE: it is important to ensure the information in square brackets after the title is included in all citations of this article.
Version 1
VERSION 1
PUBLISHED 20 Mar 2019
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11
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Reviewer Report 28 May 2019
Tri Wangrangsimakul, Mahidol-Oxford Tropical Medicine Research Unit, Faculty of Tropical Medicine, Mahidol University, Bangkok, Thailand;  Centre for Tropical Medicine and Global Health, Nuffield Department of Clinical Medicine, University of Oxford, Oxford, UK 
Approved with Reservations
VIEWS 11
The authors report a case of a 52 year old diabetic lady with complications, presenting with pyelonephritis. Cultures were negative and she was treated with antibiotics that were regularly escalated. She was also found to have bilateral sensorineural deafness on audiometry. ... Continue reading
CITE
CITE
HOW TO CITE THIS REPORT
Wangrangsimakul T. Reviewer Report For: Case Report: Acute pyelonephritis and hearing loss in scrub typhus [version 2; peer review: 2 approved]. F1000Research 2019, 8:312 (https://doi.org/10.5256/f1000research.19827.r48908)
NOTE: it is important to ensure the information in square brackets after the title is included in all citations of this article.
  • Author Response 05 Jul 2019
    Stalin Viswanathan, Department of General Medicine, Jawaharlal Institute of Postgraduate Medical Education and Research (JIPMER)., Pondicherry, 605009, India
    05 Jul 2019
    Author Response
    Dear Sir,

    Malarial parasites were not visualized on the peripheral smear on at least 2 occasions. Nevertheless, there was no hepatosplenomegaly, discolored urine, jaundice, hyperbilirubinemia and thrombocytopenia to suggest malaria.

    The same ... Continue reading
COMMENTS ON THIS REPORT
  • Author Response 05 Jul 2019
    Stalin Viswanathan, Department of General Medicine, Jawaharlal Institute of Postgraduate Medical Education and Research (JIPMER)., Pondicherry, 605009, India
    05 Jul 2019
    Author Response
    Dear Sir,

    Malarial parasites were not visualized on the peripheral smear on at least 2 occasions. Nevertheless, there was no hepatosplenomegaly, discolored urine, jaundice, hyperbilirubinemia and thrombocytopenia to suggest malaria.

    The same ... Continue reading
Views
20
Cite
Reviewer Report 03 Apr 2019
Dharshan Rangaswamy, Department of Nephrology, Kasturba Medical College, Manipal Academy of Higher Education, Manipal, India 
Ravindra Prabhu Attur, Department of Nephrology, Kasturba Medical College, Manipal Academy of Higher Education, Manipal, India 
Approved
VIEWS 20
The authors describe a rare reported manifestation of Scrub Typhus namely acute pyelonephritis and hearing loss which improved with treatment. Acute pyelonephritis has been reported once as a case report from China and hearing loss in another six cases. The ... Continue reading
CITE
CITE
HOW TO CITE THIS REPORT
Rangaswamy D and Prabhu Attur R. Reviewer Report For: Case Report: Acute pyelonephritis and hearing loss in scrub typhus [version 2; peer review: 2 approved]. F1000Research 2019, 8:312 (https://doi.org/10.5256/f1000research.19827.r45955)
NOTE: it is important to ensure the information in square brackets after the title is included in all citations of this article.
  • Author Response 05 Jul 2019
    Stalin Viswanathan, Department of General Medicine, Jawaharlal Institute of Postgraduate Medical Education and Research (JIPMER)., Pondicherry, 605009, India
    05 Jul 2019
    Author Response
    Dear Sir,

    The lady did not receive any prior treatment. The details have been included.
    It was not a chance sending of Scrub IgM. That facility is not available at our institution. ... Continue reading
COMMENTS ON THIS REPORT
  • Author Response 05 Jul 2019
    Stalin Viswanathan, Department of General Medicine, Jawaharlal Institute of Postgraduate Medical Education and Research (JIPMER)., Pondicherry, 605009, India
    05 Jul 2019
    Author Response
    Dear Sir,

    The lady did not receive any prior treatment. The details have been included.
    It was not a chance sending of Scrub IgM. That facility is not available at our institution. ... Continue reading

Comments on this article Comments (0)

Version 2
VERSION 2 PUBLISHED 20 Mar 2019
Comment
Alongside their report, reviewers assign a status to the article:
Approved - the paper is scientifically sound in its current form and only minor, if any, improvements are suggested
Approved with reservations - A number of small changes, sometimes more significant revisions are required to address specific details and improve the papers academic merit.
Not approved - fundamental flaws in the paper seriously undermine the findings and conclusions
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