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A theoretical model for optimal control of banana Moko (Musa AAB Simmonds)

[version 2; peer review: 2 approved]
Previously titled: A theoretical model for the prevention of banana Moko (Musa AAB Simmonds)
PUBLISHED 19 Feb 2021
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This article is included in the Agriculture, Food and Nutrition gateway.

Abstract

A population simulation model with non-linear ordinary differential equations is presented, which interprets the dynamics of the banana Moko, with prevention of the disease and population of susceptible and infected plants over time. A crop with a variable population of plants and a logistic growth of replanting is assumed, taking into account the maximum capacity of plants in the delimited study area. Also, with the help of farmers, the costs of implementing prevention strategies and elimination of infected plants were calculated per week in order to determine the optimal conditions that control the disease and reduce production costs. We found that the implementation of prevention strategies (f) plays an important role, but the parameter that most influences the threshold value is the elimination of infected plants g.  However, to reduce production costs due to the high implementation of prevention strategies and to maintain the disease in a controlled state, both controls u1 and u2 should be implemented between 40% and 60%, obtaining with this percentage an approximate reduction of 51.37% in production costs per week, where in 23 weeks following the same conditions it is expected to have a healthy plantation without infected plants.

Keywords

Mathematical model, Moko, Banana, Ralstonia solanacearum, Logistic growth

Revised Amendments from Version 1

In this version we include the evaluators' suggestions; The explanation of the mathematical model that was not clear was included, the sensitivity and stability analysis was organized into independent items and the optimal control problem was included with the new graphs complementing the results. This improved version is longer but more complete.

To read any peer review reports and author responses for this article, follow the "read" links in the Open Peer Review table.

Introduction

The banana is a fruit of great economic importance and food sovereignty, because it is found in the shopping basket of people across different social strata and because of its nutritional content. However, its production is threatened by re-emerging diseases such as Moko, caused by the bacterium Ralstonia solanacearum race 2 philotype II (Fegan & Prior, 2006), which causes wilting and deterioration of the plant. Symptoms are usually visible when there is a great spread of bacteria and adjacent plants may have already been infected (Viljoen et al., 2016). Moko is a peculiar manifestation of bacterial wilt; it is a quarantine pest that, once inside the host, moves through the vascular bundles. Being a vascular disease, this bacterium not only affects the vegetative part but also the daughter hill, promoting the spread of the disease, which is accelerated by the high optimal minimum, optimal and maximum temperatures of 10°C, 35°C and 41°C, respectively, infecting triploid plantains, heliconia (Heliconia spp.) and other ornamental Musacea plants (Jiang et al., 2017).

The development of mathematical models has contributed through the use of a wide range of techniques to the study of epidemics and diseases, helping to answer biological questions and raising new questions related to the epidemiology and ecology of pathogens and the diseases they cause; in most cases, mathematical models lead directly to applications in the control of the disease (Jeger et al., 2018). In plants, some prediction models have evaluated the control of some diseases in plantain and bananas, such as banana wilt by Xanthomonas (BXW) using mathematical models, describing a deterministic SI-type epidemic model for control of BXW focusing on the integrated management of the disease through cultural control as in Nannyonga et al. (2015), who considered the optimal control strategies associated with the prevention of transmission by the use of contaminated tools. The researchers assumed a model with three modes of transmission: vertical (from the mother plant to its child), horizontal (indirect) from the vector to plant, and through contaminated agricultural tools (Nannyonga et al., 2015).

Likewise, Nakakawa et al. (2016) presented a mathematical model for BXW propagated by an insect vector. The mathematical model they formulated takes into account inflorescence infection and vertical transmission from the mother corm to the daughter hills, but not tool-based transmission by humans (Nakakawa et al., 2016). In this context, a dynamic system is formulated based on ordinary two-dimensional differential equations that interprets the dynamics of incidence of banana Moko disease, including prevention and treatment.

In the research carried out by (Bautista-Montealegre et al., 2016), the state of the disease in 2016 is shown, these authors to contribute to the management of banana Moko disease in the department of Quindío-Colombia, evaluated the relationship between the incidence of the disease and variables related to physical and chemical properties of the soil, as well as the use of the soil and the altitudinal location in 269 farms analyzing soils and foliar tissues, as well as the symptoms of the disease to establish the effect of the variables on the probability of occurrence of the disease, finding a positive and significant correlation between the incidence of the disease, the hydraulic conductivity and the saturation of potassium in the soil; and negative and significant with the altitude, foliar copper concentration and presence of associated crops; Likewise, they argue that 10 of the 12 municipalities in the department have a high percentage of the disease, demonstrating the inadequate phytosanitary management that is still being carried out (Bautista-Montealegre et al., 2016).

The model

Mathematical models are a tool of a growing scientific branch and of a notorious and marked interdisciplinary nature, linking mainly biologists and mathematicians, but also researchers from other areas with the challenge of applying mathematical techniques to the study of biological processes (García-Macías & Ubertini, 2019). Previously, they were used mainly in epidemiology in SI, SIS, SIR, SIRS epidemic models among others; at present, mathematical models are, therefore, a useful tool in biology, agronomy, phytopathology, chemistry, environment and among many other areas, since they allow to make a representation of a biological system, the behavior of a certain disease etc., and with them facilitate the understanding of its dynamics in order to make predictions for future decisions on actions that facilitate control (Jeger et al., 2018).

The model presents the following assumptions:

  • In the plantation the total plant population is assumed to be positive.

  • It is considered a plantation with a maximum capacity of banana plants k

  • It is considered that the disease of the banana Moko, follows a model Epidemic type SI (Susceptible-Infectious).

  • Banana plants in asymptomatic state are not considered.

  • Removal of infected plants is considered.

A population model with nonlinear ordinary differential equations is presented, which interprets the dynamics of the banana Moko, including a constant rate of disease prevention in the population of susceptible plants over time. A variable population of plants and a logistic growth of replanting are assumed, taking into account the maximum capacity of plants in the study region. The variables and parameters of the model are: x(t), the average number of susceptible banana plants; y(t), the average number of diseased banana plants; and P(t) = x(t) + y(t), total number of banana plants at one time t, shown in Figure 1.

a2b58905-4a14-4769-a417-5ba7e157576e_figure1.gif

Figure 1. Banana Moko's disease diagram with prevention.

The model parameters are: γ, constant overseeding rate; k, load capacity (maximum capacity) of banana plants in the study region; and β, probability of transmission of infection. Preventive controls are: g, fraction of infected banana plants removed; and f, fraction of susceptible banana plants that receive prevention of contagion of the bacteria. The dynamic system that interprets the infectious process including prevention and elimination, is formed by the following two nonlinear differential equations:

dx(t)dt=γ(1x(t)+y(t)k)x(t)βy(t)x(t)+y(t)(1f)x(t)h(.)(1)

dy(t)dt=βy(t)x(t)+y(t)(1f)x(t)gy(t)ω(.)(2)

With initial conditions x(0) = x0, y(0) = y0, P(0) = x(0) + y(0), γ, k > 0, 0 < f, g, β < 1, Pk, x(t) ≡ x, and y(t) ≡ y.

The region of eco-epidemiological sense is defined where the trajectories of the plant infection dynamics make sense,

Ω={(x,y)R+2:x+yk}.

In the first equation, the derivative dxdt indicates the variation of the susceptible banana plant population with respect to time in weeks t, which is given by the inflow, the growth of susceptible banana plants by replanting γx regulated by the factor 1x+yk minus the outflow, the incidence of banana plants λ(y)(1 – f)x, where λ(y)=βyx+y is the infection force of banana Moko and (1 – f) is the fraction of population of susceptible banana plants on which no preventive measures were taken.

Similarly, in the second equation the derivative dydt represents the variation of the population of infected plants with respect to time in weeks t, given by the inflow the incidence of banana plants minus the outflow the population of plants infected deleted gy.

Stability analysis

We start by finding the equilibrium populations, the constant solutions of the system, where the population variation of susceptible plants and variation of infected plants become zero, that is, dxdt=0;dydt=0

{γ(1x+yk)β(1f)yx+y}x=0(3)
{β(1f)xx+yg}y=0(4)

We solve this non-linear algebraic system for x and y, determining the equilibrium point according to agricultural conditions.

From Equation (4) y = 0 o

β(1f)x=g(x+y)(5)

Substituting y = 0 in Equation (3), we obtain

γ(1x+yk)x=0

Of which x = 0 or x = k. Therefore, we have the point E0 = (0,0), which does not make agricultural sense, since P > 0 and the equilibrium point E1 = (k,0), disease free and in which the susceptible population equals the capacity maximum.

Solving for y from Equation (5), we obtain

y=[β(1f)g]xg(6)

Substituting Equation (6) in Equation (3), we obtain the components of equilibrium point with disease, E3 = (x^, y^).

x^=kβ(1f)g(1β(β(1f)g1)(1f)γβ(1f)g),y^=k(β(1f)g1)β(1f)g(1β(β(1f)g1)(1f)γβ(1f)g)

Considering,

ξ0=β(1f)gandρ=β(β(1f)g1)(1f)γβ(1f)g=β(ξ01)(1f)γξ0,

We write x and y like this

x^=kξ0(1ρ),y^=k(ξ01)ξ0(1ρ)

In coexistence of populations x^>0 and y^>0, which is true when ξ0 > 1 and ρ < 1.

Since P = x + y, the total plant population in equilibrium is, P^=x^+y^. That is,

P^=kξ0(1ρ)+k(ξ01)ξ0(1ρ)

Therefore, P^=k(ρ1).

ξ0, indicates the average number of infected plants that an infected plant produces during the infectious period (before being killed) in the population of susceptible plants and is considered the threshold of infected plants. We can consider this threshold as a function that depends on f and g,

ξ0(f,g)=β(1f)g.

To determine the stability of each equilibrium point (E), we apply the Hartman-Grobman theorem (Perko, 2008), linearizing the system of non-linear Equation (1)Equation (2), obtaining the linearization matrix (Jacobian matrix) of the form:

J(E)=(hx(E)hy(E)ωx(E)ωy(E))(7)

With the following partial derivative elements,

a11=hx(E)=γγk(x^+y^)γkx^β(1f)y^2(x^+y^)2

a12=hy(E)=γkx^β(1f)x^2(x^+y^)2

a21=ωx(E)=β(1f)y^2(x^+y^)2

a22=ωy(E)=β(1f)x^2(x^+y^)2g

These elements of the matrix J (E) are the coefficients of the linear system

ddtU=J(E)U

Where, U = (u, v)t (transposed vector).

We analyze the equilibrium points with an agricultural sense E1 = (k, 0) y E3 = (x^, y^). For E1, we obtain the Jacobian matrix,

J(E1)=(λ{γ+β(1f)}0g(ξ01))

Because it is a triangular matrix, the eigenvalues (λi, i = 1,2)

λ1=γ,λ2=g(ξ01)

where λ2 < 0 since the threshold ξ0 < 1.

We conclude that the free equilibrium point of Moko disease is locally and asymptomatically stable.

For case E3=(x^,y^), in matrix (7) we obtain the trace and the determinant of J(E3), respectively,

Traz.J(E3)=a11+a22;det.J(E3)=a11a22a12a21

We conclude that the equilibrium point with susceptible plants and infected plants is locally and asymptomatically stable if the threshold inequalities (ξ0 > 1 and ρ < 1) and the inequalities are met,

γ+β(1f)x^2(x^+y^)2<γk(x^+y^)+γkx^+β(1f)y^2(x^+y^)2+g

{γkx^+β(1f)x^2(x^+y^)2}β(1f)y^2(x^+y^)2>{γγk(x^+y^)γkx^β(1f)y^2(x^+y^)2}[gβ(1f)x^2(x^+y^)2]

These analytical results are shown in the phase planes of Figure 2, made with Maple 18 software (free trial available; SageMath is an openly available alternative), for different scenarios varying initial conditions.

a2b58905-4a14-4769-a417-5ba7e157576e_figure2.gif

Figure 2. Local stability of the susceptible plant population and infected plant population corresponding to ξ0 = 7 y ξ0 = 0.79.

Sensitivity analysis

The local sensitivity analysis was performed that is a measure of the relative change in a variable when its parameters change (Chitnis et al., 2008; Hamby, 1994; Rodrigues et al., 2013). That is,

Iξ0p=ξ0ppξ0

Where,

ξ0=β(1f)g

y p: β, g, f, are previously defined parameters.

The indices of local sensitivity of the threshold ξ0p were calculated with respect to each parameter:

Iξ0β=(1f)gββ(1f)g=1
Iξ0f=βgfβ(1f)g=f1f
Iξ0g=β(1f)g2gβ(1f)g=1

With respect to the values of the threshold indices of the disease and the Figure 3., the following observations are made:

  • For f = 0.5 it is true that Iξ0g = Iξ0f

  • When the percentage of plants receiving prevention increases, the disease threshold decreases, that is, they are inversely proportional. This behavior is good in managing the disease.

  • For values of f,g < 0.5, the disease threshold index is lower for the elimination of infected plants (g) and in the case that f,g > 0.5, the disease threshold index is lower in the case of prevention of susceptible plants.

  • The disease threshold increases proportionally with respect to the transmission probability.

a2b58905-4a14-4769-a417-5ba7e157576e_figure3.gif

Figure 3. In the graph the line (∙∙∙∙∙∙) corresponds to the index Iξ0g , the line (---) at the index Iξ0β and the line ( ______ ) at the index Iξ0f , p indicates each parameter g,β and f.

It is concluded that mathematical simulation models are a useful tool for research in banana Moko disease. With them it was determined that the elimination of banana plants infected with the disease plays an essential role in the good agronomic management of the crop.

Optimal control problem

An objective, quadratic and cost functional linked to a system is presented of nonlinear ordinary differential equations, which interprets the dynamics of banana Moko (Figure 4), including a constant rate of disease prevention in the population of susceptible plants over time. It assumes a variable population of plants and a logistic growth of replanting having taken into account the maximum capacity of plants in the study region (Cherruault & Gallego, 1985; Louadj et al., 2018). The variables and parameters of the optimal control problem are described in Table 1.

a2b58905-4a14-4769-a417-5ba7e157576e_figure4.gif

Figure 4. Dynamics of banana Moko with variable controls.

The functional objective of direct and indirect costs is proposed:

J(x,u)=0TL(x,u)dt=0T{η1y(t)+η22u12(t)+η32u22(t)}dt

Table 1. Variables, parameters, parameter values, and initial populations at t = 0.

Variables,
parameters
DescriptionValueReference
x(t)Susceptible plants800assigned
y(t)Infected plants8assigned
p(t) = x(t) + x(t)Total plants808assigned
kLoading capacity1300per hectare
βTransmission probability0.7assigned
γReplanting rate3assigned
u1Prevention practices____________
u2Elimination of infected plants____________
η1Costs for each y10200farmer
η2Costs of applying u167260farmer
η3Costs of applying u251000farmer

Linked to the system of differential equations:

dx(t)dt=γ(1x(t)+y(t)k)x(t)βy(t)x(t)+y(t)(1u1(t))x(t)f1
dy(t)dt=βy(t)x(t)+y(t)(1u1(t))x(t)u2(t)y(t)f2

With initial conditions x(0) = x0, y(0) = y0, P(0) = x(0) + y(0), γ, k > 0, 0 ≤ u1, u2, β ≤ 1 and Pk.

It is about finding optimal control (u¯1(t),u¯2(t)) such that:

J(u¯1(t),u¯2(t))=minΓJ(u¯1(t),u¯2(t))

Where,

Γ={(u¯1(t),u¯2(t))L2(0,T):0u1(t)1,0u2(t)1}

is the space of admissible controls and L2 is the space of integrable functions, and T is the control terminal time.

Optimal control problem analysis

The Hamiltonian function or (Pontryagin function) is of the form:

H(x,u,λ)=L(x,u)+i=12λifi

where x = (x, y) is the vector of state variables, u = (u1; u2) the vector of controls, λ = (λ1, λ2) the vector of attached or conjugate variables and L is the Lagrangian. That is to say,

H(x,u,λ)=η1y(t)+η22u12(t)+η32u22(t)
+λ1[γ(1x(t)+y(t)k)x(t)βy(t)x(t)+y(t)(1u1(t))x(t)]
+λ2[βy(t)x(t)+y(t)(1u1(t))x(t)u2(t)y(t)]

Applying the first order condition Hu1=0yHu2=0,, the optimal control is obtained:

u1(t)=min(max(0,(λ2λ1η2)βxyx+y),1)
u2(t)=min(max(0,(λ2yη3)),1)

The conjugate system (or adjoint system) has the form:

dλdt=Hx(x,λ,u)

that is to say,

dλ1dt=λ1Aλ2Cg1(x,u,λ)
dλ2dt=η1λ1Bλ2Dg2(x,u,λ)

Where,

A=γγk(xy)γkxβ(1u¯1)y2(x+y)2
B=γkxβ(1u¯1)x2(x+y)2
C=β(1u¯1)y2(x+y)2
D=β(1u¯1)x2(x+y)2u¯2

with transversality conditions λi(T) = 0, i = 1,2.

The contour problem is formed by the system of state variables of the dynamics of the Moko with their respective initial conditions, the conjugated system and the terminal conditions and the optimal controls:

{dxdt=F(x,u¯)x(0)=x0dλdt=G(x,u¯,λ)λ(T)=0u1(t)=min(max(0,(λ2λ1η2)βxyx+y),1)u2(t)=min(max(0,(λ2yη3)),1)

Results and conclusions

Numerical analysis of the contour problem: with this analysis we can observe the decrease of the infected plants varying different conditions of the controls u1 and u2, showing that when u1 and u2 are not implemented as shown in the figure at week 120, the population of infected plants tends to increase (Figure 5), and that the implementation of control u1 in approximately 45% (Figure 6) and the implementation of control u2 in approximately 60% (Figure 7), produces a complete decrease in infected plants at week 23.

a2b58905-4a14-4769-a417-5ba7e157576e_figure5.gif

Figure 5. Behavior of infected plants of banana Moko disease in the time t.

a2b58905-4a14-4769-a417-5ba7e157576e_figure6.gif

Figure 6. The trajectories of the control u1(t).

a2b58905-4a14-4769-a417-5ba7e157576e_figure7.gif

Figure 7. The trajectories of the controls u2(t).

With this we can determine that if both controls are implemented in 40% and 60% respectively, the banana Moko disease in a crop with good agronomic management tends to disappear, likewise it contributes to reducing the production costs associated with the loss of plants due to infection and the costs of implementing prevention strategies by 51.13% weekly, which is equivalent to 60,756 Colombian pesos.

We conclude that in order to reduce production costs and maintain the disease in a controlled state, the recommended prevention strategies should be implemented, and with greater relevance the detection and rapid elimination of infected plants.

Data availability

All data underlying the results are available as part of the article and no additional source data are required.

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Grajales-Amorocho M and Muñoz Loaiza A. A theoretical model for optimal control of banana Moko (Musa AAB Simmonds) [version 2; peer review: 2 approved]. F1000Research 2021, 9:1443 (https://doi.org/10.12688/f1000research.27373.2)
NOTE: If applicable, it is important to ensure the information in square brackets after the title is included in all citations of this article.
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Version 2
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PUBLISHED 19 Feb 2021
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Reviewer Report 01 Mar 2021
Dalia M. Muñoz, Oceanographic Research Institute, Universidad Autónoma de Baja California, Ensenada, Mexico 
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This new version is clearer, more complete, and presents the relevance of the study.

This version already includes more recent references.

The optimal control section already appears as a complete and consistent section with ... Continue reading
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Muñoz DM. Reviewer Report For: A theoretical model for optimal control of banana Moko (Musa AAB Simmonds) [version 2; peer review: 2 approved]. F1000Research 2021, 9:1443 (https://doi.org/10.5256/f1000research.54612.r79924)
NOTE: it is important to ensure the information in square brackets after the title is included in all citations of this article.
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Reviewer Report 24 Feb 2021
Ana Maria Pulecio Montoya, Department of Mathematics and Statistics, University of Nariño, Pasto, Colombia 
Approved
VIEWS 6
The authors made all the suggested changes. In my opinion, the article is a great scientific contribution to understand ... Continue reading
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Pulecio Montoya AM. Reviewer Report For: A theoretical model for optimal control of banana Moko (Musa AAB Simmonds) [version 2; peer review: 2 approved]. F1000Research 2021, 9:1443 (https://doi.org/10.5256/f1000research.54612.r79925)
NOTE: it is important to ensure the information in square brackets after the title is included in all citations of this article.
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Reviewer Report 04 Jan 2021
Ana Maria Pulecio Montoya, Department of Mathematics and Statistics, University of Nariño, Pasto, Colombia 
Approved with Reservations
VIEWS 10
The manuscript deals with analytical and numerical study of a model of Ordinary Differential Equations to treat banana Moko dynamics. I submit the following suggestions in order to improve this article:
  • The abstract needs to explain
... Continue reading
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Pulecio Montoya AM. Reviewer Report For: A theoretical model for optimal control of banana Moko (Musa AAB Simmonds) [version 2; peer review: 2 approved]. F1000Research 2021, 9:1443 (https://doi.org/10.5256/f1000research.30252.r76032)
NOTE: it is important to ensure the information in square brackets after the title is included in all citations of this article.
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Reviewer Report 23 Dec 2020
Dalia M. Muñoz, Oceanographic Research Institute, Universidad Autónoma de Baja California, Ensenada, Mexico 
Approved with Reservations
VIEWS 13
The authors present a simulation model to treat banana Moko dynamics, which constitutes an essential topic in food safety.  The model seems to be correctly implemented. However, the manuscript lacks some clarity, and more discussion on the results is strongly ... Continue reading
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Muñoz DM. Reviewer Report For: A theoretical model for optimal control of banana Moko (Musa AAB Simmonds) [version 2; peer review: 2 approved]. F1000Research 2021, 9:1443 (https://doi.org/10.5256/f1000research.30252.r76029)
NOTE: it is important to ensure the information in square brackets after the title is included in all citations of this article.

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Not approved - fundamental flaws in the paper seriously undermine the findings and conclusions
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