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https://doi.org/10.12688/f1000research.3714.1
Opinion Article metrics
New forms of checks and balances are needed to improve research integrity
[version 1; peer review: 2 approved, 1 not approved]
Elizabeth Iorns, Christin Chong
Peer Reviewers Andrew D. Chalmers; Ivan Oransky; David Soll
PUBLISHED 28 May 2014
https://doi.org/10.12688/f1000research.3-60.v2
Research Article metrics
Revised
An image-based, dual fluorescence reporter assay to evaluate the efficacy of shRNA for gene silencing at the single-cell level
[version 2; peer review: 2 approved]
Shin-ichiro Kojima, Gary G. Borisy
Peer Reviewers Kenneth Yamada and Matthew Kutys; Wen Lu
LATEST VERSION PUBLISHED 20 May 2014
https://doi.org/10.12688/f1000research.3216.1
Review metrics
An analysis on the entity annotations in biological corpora
[version 1; peer review: 2 approved]
Mariana Neves
Peer Reviewers Roman Klinger; Paloma Martínez
PUBLISHED 25 Apr 2014
https://doi.org/10.12688/f1000research.3-47.v2
Software Tool Article metrics
Revised
FeatureViewer, a BioJS component for visualization of position-based annotations in protein sequences
[version 2; peer review: 2 approved]
Leyla Garcia, Guy Yachdav, Maria-Jesus Martin
Peer Reviewers Jim Procter; Andreas Prlic
LATEST VERSION PUBLISHED 09 Apr 2014
https://doi.org/10.12688/f1000research.3784.1
Short Research Article metrics
Prevalence of primary outcome changes in clinical trials registered on ClinicalTrials.gov: a cross-sectional study
[version 1; peer review: 3 approved]
Sreeram V. Ramagopalan, Andrew P. Skingsley, Lahiru Handunnetthi, Michelle Klingel, Daniel Magnus, Julia Pakpoor, Ben Goldacre
Peer Reviewers Janet Wale; Deborah Korenstein; Steven Julious
PUBLISHED 26 Mar 2014
https://doi.org/10.12688/f1000research.3-40.v2
Commentary metrics
Revised
Drugs acting on central nervous system (CNS) targets as leads for non-CNS targets
[version 2; peer review: 2 approved, 1 approved with reservations]
Prashant S. Kharkar
Peer Reviewers Vijay Gokhale; Evans Coutinho; Hariprasad Vankayalapati
LATEST VERSION PUBLISHED 21 Mar 2014
https://doi.org/10.12688/f1000research.3713.1
Data Article metrics
Compound data sets and software tools for chemoinformatics and medicinal chemistry applications: update and data transfer
[version 1; peer review: 3 approved]
Ye Hu, Jürgen Bajorath
Peer Reviewers Ajay Jain; Chris J. Swain; Patrick Walters
PUBLISHED 11 Mar 2014
https://doi.org/10.12688/f1000research.2-281.v2
Research Article metrics
Revised
Rapid and inexpensive body fluid identification by RNA profiling-based multiplex High Resolution Melt (HRM) analysis
[version 2; peer review: 2 approved]
Erin K. Hanson, Jack Ballantyne
Peer Reviewers Gustavo J. Gutierrez Gonzalez and Chiranjeevi Bodda; Titia Sijen
LATEST VERSION PUBLISHED 26 Feb 2014
https://doi.org/10.12688/f1000research.3-36.v2
Data Article metrics
Revised
Matched molecular pair-based data sets for computer-aided medicinal chemistry
[version 2; peer review: 4 approved]
Ye Hu, Antonio de la Vega de León, Bijun Zhang, Jürgen Bajorath
Peer Reviewers Ajay Jain; Peter Ertl; Patrick Walters; Shana Posy
LATEST VERSION PUBLISHED 21 Feb 2014
https://doi.org/10.12688/f1000research.2-217.v2
Method Article metrics
Revised
MethylExtract: High-Quality methylation maps and SNV calling from whole genome bisulfite sequencing data
[version 2; peer review: 3 approved]
Guillermo Barturen, Antonio Rueda, José L. Oliver, Michael Hackenberg
Peer Reviewers Michael B. Stadler; Jörn Walter; Felix Krueger
LATEST VERSION PUBLISHED 21 Feb 2014
https://doi.org/10.12688/f1000research.3-56.v1
Editorial metrics NOT PEER REVIEWED
The BioJS article collection of open source components for biological data visualisation
[version 1; peer review: not peer reviewed]
Manuel Corpas
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.3-50.v1
Software Tool Article metrics
PPI layouts: BioJS components for the display of Protein-Protein Interactions
[version 1; peer review: 2 approved]
Gustavo A. Salazar, Ayton Meintjes, Nicola Mulder
Peer Reviewers Laurent Gatto; Hagen Blankenburg
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.3-49.v1
Web Tool metrics
treeWidget: a BioJS component to visualise phylogenetic trees
[version 1; peer review: 1 approved, 1 approved with reservations]
Fabian Schreiber
Peer Reviewers Jaime Huerta-Cepas; Stephen A. Smith
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.2-244.v2
Research Article metrics
Revised
Mapping whole genome shotgun sequence and variant calling in mammalian species without their reference genomes
[version 2; peer review: 2 approved]
Ted Kalbfleisch, Michael P. Heaton
Peer Reviewers Claire Wade; María Ávila-Arcos
LATEST VERSION PUBLISHED 10 Feb 2014
https://doi.org/10.12688/f1000research.3-17.v1
Web Tool metrics
Ranking the quality of protein structure models using sidechain based network properties
[version 1; peer review: 2 approved]
Soma Ghosh, Saraswathi Vishveshwara
Peer Reviewers Rahul Banerjee; Soumen Roy and Rajdeep Kaur Grewal
PUBLISHED 21 Jan 2014
https://doi.org/10.12688/f1000research.2-260.v2
Commentary metrics
Revised
Promiscuous scaffolds in proteins - non-native, non-additive and non-trivial
[version 2; peer review: 1 approved with reservations, 2 not approved]
Sandeep Chakraborty, Bjarni Asgeirsson, Mouparna Dutta, Anindya S Ghosh, Masataka Oda, Adela Rendón, Felix Goñi, Jean-Marie Frere, Ravindra Venkatramani, Abhaya M. Dandekar, Basuthkar J. Rao
Peer Reviewers Neil D. Rawlings; Abhinav Nath; Christopher Bahl
LATEST VERSION PUBLISHED 20 Jan 2014
https://doi.org/10.12688/f1000research.2-265.v1
Web Tool metrics
PanFunPro: PAN-genome analysis based on FUNctional PROfiles
[version 1; peer review: 3 approved with reservations]
Oksana Lukjancenko, Martin Christen Thomsen, Mette Voldby Larsen, David Wayne Ussery
Peer Reviewers Granger Sutton; Bruno Contreras-Moreira; Cameron Thrash
PUBLISHED 05 Dec 2013
https://doi.org/10.12688/f1000research.2-224.v2
Short Research Article metrics
Revised
Amplicon pyrosequencing and ion torrent sequencing of wild duck eubacterial microbiome from fecal samples reveals numerous species linked to human and animal diseases
[version 2; peer review: 3 approved with reservations]
Thomas Strong, Scot Dowd, Alexander F. Gutierrez, David Molnar, Jonathan Coffman
Peer Reviewers Jorge Santo Domingo; Jonas Waldenström; Benjamin Kirkup
LATEST VERSION PUBLISHED 04 Dec 2013
https://doi.org/10.12688/f1000research.2-264.v1
Software Tool Article metrics
illuminaio: An open source IDAT parsing tool for Illumina microarrays
[version 1; peer review: 2 approved]
Mike L Smith, Keith A. Baggerly, Henrik Bengtsson, Matthew E. Ritchie, Kasper D. Hansen
Peer Reviewers Jan Oosting; Tiffany J. Morris
PUBLISHED 04 Dec 2013
https://doi.org/10.12688/f1000research.2-258.v1
Web Tool metrics
C-Sibelia: an easy-to-use and highly accurate tool for bacterial genome comparison
[version 1; peer review: 2 approved]
Ilya Minkin, Hoa Pham, Ekaterina Starostina, Nikolay Vyahhi, Son Pham
Peer Reviewers Jeffrey McLean; Loren J Hauser
PUBLISHED 25 Nov 2013
601-620 of 631 ARTICLES
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