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https://doi.org/10.12688/f1000research.7387.1
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Continuous Attractor Neural Networks: Candidate of a Canonical Model for Neural Information Representation
[version 1; peer review: 2 approved]
Si Wu, K Y Michael Wong, C C Alan Fung, Yuanyuan Mi, Wenhao Zhang
Peer Reviewers Yi Zhang; Thomas Trappenberg
PUBLISHED 10 Feb 2016
https://doi.org/10.12688/f1000research.7492.1
Review metrics
Up in the air: Untethered Factors of Auxin Response
[version 1; peer review: 5 approved]
Samantha K. Powers, Lucia C. Strader
Peer Reviewers Nihal Dharmasiri; Dolf Weijers; Richard M. Napier; Mark Estelle; Juan Carlos del Pozo
PUBLISHED 03 Feb 2016
https://doi.org/10.12688/f1000research.7180.1
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Catalysts of plant cell wall loosening
[version 1; peer review: 2 approved]
Daniel J. Cosgrove
Peer Reviewers A. Lacey Samuels; Olivier Hamant and Jan Traas
PUBLISHED 29 Jan 2016
https://doi.org/10.12688/f1000research.7562.1
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Reconciling Techno-simplicity and Eco-complexity for future food security
[version 1; peer review: 2 approved with reservations]
Santiago L. Poggio, Sarina Macfadyen, David A. Bohan
Peer Reviewers Joern Fischer; R Ford Denison
PUBLISHED 23 Dec 2015
https://doi.org/10.12688/f1000research.7063.1
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Recent advances in treatment for Benign Prostatic Hyperplasia
[version 1; peer review: 2 approved]
Simon van Rij, Peter Gilling
Peer Reviewers Tevita 'Aho; Kevin Zorn
PUBLISHED 21 Dec 2015
https://doi.org/10.12688/f1000research.6167.1
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A developmental biologist’s journey to rediscover the Zen of plant physiology
[version 1; peer review: 3 approved]
José R. Dinneny
Peer Reviewers Christophe Maurel; David Salt; Jan Traas
PUBLISHED 16 Jul 2015
https://doi.org/10.12688/f1000research.6661.1
Data Note metrics
Comprehensive knowledge base of two- and three-dimensional activity cliffs for medicinal and computational chemistry
[version 1; peer review: 3 approved]
Ye Hu, Norbert Furtmann, Dagmar Stumpfe, Jürgen Bajorath
Peer Reviewers Alexandre Varnek; Veer Shanmugasundaram; Gerhard Müller
PUBLISHED 25 Jun 2015
https://doi.org/10.12688/f1000research.6644.1
Software Tool Article metrics
Constellation Map: Downstream visualization and interpretation of gene set enrichment results
[version 1; peer review: 2 approved]
Yan Tan, Felix Wu, Pablo Tamayo, W. Nicholas Haining, Jill P. Mesirov
Peer Reviewers Hilary Ann Coller; Sayan Mukherjee
PUBLISHED 24 Jun 2015
https://doi.org/10.12688/f1000research.5802.2
Research Article metrics
Revised
The PDB database is a rich source of alpha-helical anti-microbial peptides to combat disease causing pathogens
[version 2; peer review: 2 approved, 1 approved with reservations]
Sandeep Chakraborty, My Phu, Tâmara Prado de Morais, Rafael Nascimento, Luiz Ricardo Goulart, Basuthkar J. Rao, Bjarni Asgeirsson, Abhaya M. Dandekar
Peer Reviewers Jean-Marc Berjeaud; Autar Mattoo and Ravinder Goyal; Kevan Hartshorn
LATEST VERSION PUBLISHED 16 Jun 2015
https://doi.org/10.12688/f1000research.6271.2
Method Article metrics
Revised
Follow-up: Prospective compound design using the ‘SAR Matrix’ method and matrix-derived conditional probabilities of activity
[version 2; peer review: 4 approved]
Disha Gupta-Ostermann, Yoichiro Hirose, Takenao Odagami, Hiroyuki Kouji, Jürgen Bajorath
Peer Reviewers Hans Matter; Georgia B. McGaughey; Stefan A Laufer; Dragos Horvath
LATEST VERSION PUBLISHED 15 Apr 2015
https://doi.org/10.12688/f1000research.3940.2
Opinion Article metrics
Revised
Readable workflows need simple data
[version 2; peer review: 3 approved with reservations, 1 not approved]
Claas-Thido Pfaff, Helge Bruelheide, Sophia Ratcliffe, Christian Wirth, Karin Nadrowski
Peer Reviewers Paolo Missier; Barry Demchak; Kristina Hettne; David Soergel
LATEST VERSION PUBLISHED 17 Nov 2014
https://doi.org/10.12688/f1000research.5564.1
Opinion Article metrics
Collaboration for rare disease drug discovery research
[version 1; peer review: 2 approved]
Nadia K. Litterman, Michele Rhee, David C. Swinney, Sean Ekins
Peer Reviewers Nicholas Meanwell; Stephen Groft
PUBLISHED 31 Oct 2014
https://doi.org/10.12688/f1000research.4510.2
Software Tool Article metrics
Revised
Cytoscape tools for the web age: D3.js and Cytoscape.js exporters
[version 2; peer review: 2 approved]
Keiichiro Ono, Barry Demchak, Trey Ideker
Peer Reviewers Alexander Lex; Jose Villaveces
LATEST VERSION PUBLISHED 28 Oct 2014
https://doi.org/10.12688/f1000research.5486.1
Software Tool Article metrics
Viewing multiple sequence alignments with the JavaScript Sequence Alignment Viewer (JSAV)
[version 1; peer review: 2 approved, 1 approved with reservations]
Andrew C. R. Martin
Peer Reviewers Christoph Gille; David Martin; Robert Paul Davey
PUBLISHED 23 Oct 2014
https://doi.org/10.12688/f1000research.4336.3
Research Article metrics
Revised
Brain-to-Brain (mind-to-mind) interaction at distance: a confirmatory study
[version 3; peer review: 1 approved, 1 not approved]
Patrizio E. Tressoldi, Luciano Pederzoli, Marco Bilucaglia, Patrizio Caini, Pasquale Fedele, Alessandro Ferrini, Simone Melloni, Diana Richeldi, Florentina Richeldi, Agostino Accardo
Peer Reviewers James Lake; Sam Schwarzkopf
LATEST VERSION PUBLISHED 23 Oct 2014
https://doi.org/10.12688/f1000research.5499.1
Software Tool Article metrics
Visualisation of BioPAX Networks using BioLayout Express3D
[version 1; peer review: 2 approved]
Derek W. Wright, Tim Angus, Anton J. Enright, Tom C. Freeman
Peer Reviewers Gary D Bader; Jianguo Xia
PUBLISHED 20 Oct 2014
https://doi.org/10.12688/f1000research.4537.2
Software Tool Article metrics
Revised
GASOLINE: a Cytoscape app for multiple local alignment of PPI networks
[version 2; peer review: 2 approved, 1 approved with reservations]
Giovanni Micale, Andrea Continella, Alfredo Ferro, Rosalba Giugno, Alfredo Pulvirenti
Peer Reviewers Antonio J. Perez Pulido and Pablo Mier; Rintaro Saito; Byung-Jun Yoon and Pablo Mier
LATEST VERSION PUBLISHED 23 Sep 2014
https://doi.org/10.12688/f1000research.4431.2
Software Tool Article metrics
Revised
ReactomeFIViz: a Cytoscape app for pathway and network-based data analysis
[version 2; peer review: 2 approved]
Guanming Wu, Eric Dawson, Adrian Duong, Robin Haw, Lincoln Stein
Peer Reviewers Hamid Bolouri; Nikolaus Schultz and B. Arman Aksoy
LATEST VERSION PUBLISHED 12 Sep 2014
https://doi.org/10.12688/f1000research.3-6.v2
Software Tool Article metrics
Revised
DataUp: A tool to help researchers describe and share tabular data
[version 2; peer review: 2 approved]
Carly Strasser, John Kunze, Stephen Abrams, Patricia Cruse
Peer Reviewers Carol Goble and Katy Wolstencroft; Louise Corti
LATEST VERSION PUBLISHED 12 Sep 2014
https://doi.org/10.12688/f1000research.4669.1
Method Article metrics PEER REVIEW DISCONTINUED
Finite-state discrete-time Markov chain models of gene regulatory networks
[version 1; peer review: peer review discontinued]
Vladimir Skornyakov, Maria Skornyakova, Antonina Shurygina, Pavel Skornyakov
Peer Reviewers Invited
PUBLISHED 12 Sep 2014
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