<p>SquiDBase: a centralized community resource of microbial paired squiggle-sequence data</p>

Wim L Cuypers; Julia M Gauglitz; Halil Ceylan; Eline Turcksin; Nick de Vrij; Tessa de Block; Koen Vercauteren; Kevin K Ariën; Philippe  Selhorst; Wout Bittremieux; Kris Laukens

doi:10.7490/f1000research.1119905.1

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Cuypers WL, Gauglitz JM, Ceylan H et al. SquiDBase: a centralized community resource of microbial paired squiggle-sequence data [version 1; not peer reviewed]. F1000Research 2024, 13:1157 (poster) (https://doi.org/10.7490/f1000research.1119905.1)

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SquiDBase: a centralized community resource of microbial paired squiggle-sequence data

Wim L Cuypers¹, Julia M Gauglitz, Halil Ceylan, Eline Turcksin, Nick de Vrij, Tessa de Block, Koen Vercauteren, Kevin K Ariën, Philippe Selhorst, Wout Bittremieux, Kris Laukens

Published 07 Oct 2024 (https://doi.org/10.7490/f1000research.1119905.1)

Author Affiliations

¹ Computer Science, University of Antwerp, Antwerp, Flanders, Belgium

Copyright © 2024 Cuypers WL et al. This is an open access work distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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CITE

Published 07 Oct 2024

SquiDBase: a centralized community resource of microbial paired squiggle-sequence data
[version 1; not peer reviewed]

Wim L Cuypers¹, Julia M Gauglitz, Halil Ceylan, Eline Turcksin, Nick de Vrij, Tessa de Block, Koen Vercauteren, Kevin K Ariën, Philippe Selhorst, Wout Bittremieux, Kris Laukens

Author Affiliations

¹ Computer Science, University of Antwerp, Antwerp, Flanders, Belgium

Presented at

Intelligent Systems for Molecular Biology Conference (ISMB), 2025

Abstract

Competing Interests

No competing interests were disclosed

Keywords

Nanopore, sequencing, Raw sequencing data, Database, Pathogens

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