<p>Development and validation of a bioinformatics pipeline for routine analysis of whole genome sequencing data for typing of <i>Listeria monocytogenes</i></p>

Qiang Fu; Bert Bogaerts; Raf Winand; Julien Van Braekel; Wesley Mattheus; Pieter-Jan Ceyssens; Bavo Verhaegen; Sigrid C. J. De Keersmaecker; Nancy H. C.  Roosens; Kevin Vanneste

doi:10.7490/f1000research.1117301.1

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Fu Q, Bogaerts B, Winand R et al. Development and validation of a bioinformatics pipeline for routine analysis of whole genome sequencing data for typing of Listeria monocytogenes [version 1; not peer reviewed]. F1000Research 2019, 8(ISCB Comm J):1381 (poster) (https://doi.org/10.7490/f1000research.1117301.1)

NOTE: it is important to ensure the information in square brackets after the title is included in this citation.

Development and validation of a bioinformatics pipeline for routine analysis of whole genome sequencing data for typing of Listeria monocytogenes

Qiang Fu, Bert Bogaerts, Raf Winand, Julien Van Braekel, Wesley Mattheus, Pieter-Jan Ceyssens, Bavo Verhaegen, Sigrid C. J. De Keersmaecker, Nancy H. C. Roosens, Kevin Vanneste¹

Published 07 Aug 2019 (https://doi.org/10.7490/f1000research.1117301.1)

Author Affiliations

¹ Sciensano, Belgium

Copyright © 2019 Fu Q et al. This is an open access work distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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CITE

Published 07 Aug 2019

Development and validation of a bioinformatics pipeline for routine analysis of whole genome sequencing data for typing of Listeria monocytogenes
[version 1; not peer reviewed]

Qiang Fu, Bert Bogaerts, Raf Winand, Julien Van Braekel, Wesley Mattheus, Pieter-Jan Ceyssens, Bavo Verhaegen, Sigrid C. J. De Keersmaecker, Nancy H. C. Roosens, Kevin Vanneste¹

Author Affiliations

¹ Sciensano, Belgium

Presented at

ISMB/ECCB 2019

Abstract

Competing Interests

No competing interests were disclosed

Keywords

whole genome sequencing, bioinformatics, public health, sequence typing, bacteria, Listeria monocytogenes

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Development and validation of a bioinformatics pipeline for routine analysis of whole genome sequencing data for typing of Listeria monocytogenes

Development and validation of a bioinformatics pipeline for routine analysis of whole genome sequencing data for typing of Listeria monocytogenes [version 1; not peer reviewed]

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Development and validation of a bioinformatics pipeline for routine analysis of whole genome sequencing data for typing of Listeria monocytogenes
[version 1; not peer reviewed]