<p>Developing an Arvados BWA-GATK pipeline</p>

Pjotr Prins; Joep de Ligt; Isaac J Nijman; Peter Amstutz; Bryan Cosca; Ward Vandewege

doi:10.7490/f1000research.1110026.1

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Prins P, Ligt Jd, Nijman IJ et al. Developing an Arvados BWA-GATK pipeline [version 1; not peer reviewed]. F1000Research 2015, 4(ISCB Comm J):283 (slides) (https://doi.org/10.7490/f1000research.1110026.1)

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Developing an Arvados BWA-GATK pipeline

Pjotr Prins¹, Joep de Ligt, Isaac J Nijman, Peter Amstutz, Bryan Cosca, Ward Vandewege

Published 19 Jul 2015 (https://doi.org/10.7490/f1000research.1110026.1)

Author Affiliations

¹ UMC Utrecht, The Netherlands

Copyright © 2015 Prins P et al. This is an open access work distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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CITE

Published 19 Jul 2015

Developing an Arvados BWA-GATK pipeline
[version 1; not peer reviewed]

Pjotr Prins¹, Joep de Ligt, Isaac J Nijman, Peter Amstutz, Bryan Cosca, Ward Vandewege

Author Affiliations

¹ UMC Utrecht, The Netherlands

Presented at

Bioinformatics Open Source Conference (BOSC 2015)

Competing Interests

BC, PA and WV are employees of Curoverse, the makers of Arvados. This lightning talk was peer reviewed by BOSC.

Keywords

Bioinformatics pipelines scalability

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