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Research Article

Evaluation of possible biological control of Fusarium sp. using plant extracts and antagonistic species of microbes in vitro

[version 1; peer review: 3 approved with reservations]
PUBLISHED 03 Dec 2020
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This article is included in the Plant Science gateway.

This article is included in the Agriculture, Food and Nutrition gateway.

Abstract

Background: Fusarium species is one of the most devastating fungi responsible for fruit and vegetable crops rot worldwide. The present study was designed to find an ecofriendly control measure for pathogenic Fusarium species, using suitable bioagents.
Methods: Medicinal plant extracts were evaluated or their antifungal activities against Fusarium species using the poisoned food method. Antagonistic potency of some nonpathogenic microbes was also assessed on Fusarium species using the dual culture method.
Results: Highest inhibition of growth of Fusarium sp. was observed with 68.1% (0.389 mg per 90 mm Petri plate) of mycelia on Coccinia grandis plant leaf extract, in comparison to the control grown with 100.0% (1.22 mg/dish). The highest inhibition of radial growth was observed using Trichoderma viride on Fusarium sp. (46.01% inhibition).
Conclusions: The findings of present study would be benevolent for antifungal drug development to control Fusarium sp. causing fruit and vegetable rot.

Keywords

Fusarium sp., Plants extract, Non-pathogenic microbes, Antagonisms, Biocontrol

Introduction

Fusarium species are a large genus of hyaline filamentous mold fungi, responsible for fruit and vegetable crop rot (Al-Najada & Gherbawy, 2015; Ziedan et al., 2018). Fusarium species are deeply invasive and can cause hematogenously disseminated infections with high mortality in neutropenic patients (Dignani & Anaissie, 2004). Numerous species of Fusarium contribute to yield loss and reduced quality to varying degrees by infection with some mycotoxins (O’Donnell et al., 2009). They also cause decay of various fruit in storage and postharvest conditions (Whiteside et al., 1988). The fruit rot caused by Fusarium incurs enormous yield losses and is often observed in fields and markets (Baria et al., 2015). The application of antagonistic agents and plant extracts in agriculture are becoming a major focus of plant protection research. Different preservatives or fungicide treatments are frequently applied to manage fruits diseases and decay, which is an alarming health concern (Munhuweyi et al., 2020). Since most chemical fungicides are highly toxic to humans and animals and they frequently cause water and soil pollution (Al-Najada & Gherbawy, 2015). Moreover, continuous and indiscriminate use is leading to the development of fungicide resistant strains of pathogens (Tafinta et al., 2013).

In Bangladesh, fruit rot is a destructive disease caused by Fusarium species on pre-harvest and postharvest fruits. To the best of our knowledge, there is no previous research on biological control of this pathogenic fungus. Therefore, the main objective of the study was to find an ecofriendly control system of Fusarium sp., to decrease fruit and vegetable rot in Bangladesh.

Methods

Collection of Fusarium sp.

A pure culture of Fusarium sp. was previously isolated and identified (Accession No. MT856371) from postharvest Citrus reticulata fruit rot (Hasan et al., 2020). The culture was preserved at the Department of Genetic Engineering and Biotechnology, University of Rajshahi (Rajshahi, Bangladesh).

In vitro assessment of antifungal potential of selected plants

For antifungal activities screening, six healthy, mature medicinal plants, Allium sativum, Zingiber officinale, Coccinia grandis, Brassica juncea, Ocimum tenuiflorum and Hibiscus rosa-sinensis were collected from Mirzapur, Binodpur and Kajla village, Motihar, Rajshahi, Bangladesh.

Collected plants were washed with water to remove dust from the plants’ surface and dried in room temperature. Plant extract preparation and fractionation was performed according to the method by Kader et al. (2018). Different parts of selected plants (bulb of Allium sativum; rhizome of Zingiber officinale; leaves of Coccinia grandis, Brassica juncea, Ocimum tenuiflorum; and flowers of Hibiscus rosa-sinensis plants) were cut into small species and ground by blender to form fine powder. The dried powder of the plants (100gm of each plant) were rinsed in methanol (500ml) using a conical flask, and were incubated in a shaking incubator with occasional shaking for fourteen days. The liquid contents were pressed through Markin cloth followed by filtration using Whatman no. 1 filter paper. Obtained filtered liquids were dehydrated in vacuo to leave a blackish and sticky mass. The extracts were collected in vials and preserved in a refrigerator at 4°C.

The inhibitory effect of different plant extracts was measured by following the poisoned food technique (Balamurugan, 2014). For this, 20µg of each plant extract was added to 20ml of potato dextrose agar (PDA) to fill a 90mm size Petri plate and mixed well. After solidification, seven day old 6 mm size fungal plug was placed in the center of the Petri plates. The Petri plates were incubated at 35°C for seven days in static condition.

In vitro antagonistic test

For evaluation of antagonistic effects, six non-pathogenic pure microbe cultures, Escherichia coli, Rhizobium phaseoli, Rhizobium leguminosarum, Neofusicoccum mangifera, Trichoderma viride and Pestalotiopsis sp. were used against Fusarium species. The pure microbe cultures were kindly provided by Dr. Md. Salah Uddin, Associate Professor and Director, Microbiology Lab., Department of Genetic Engineering and Biotechnology, University of Rajshahi, as the part of a collaboration.

To assess the antagonistic effects, the dual culture technique was used, as previously described (Vethavalli & Sudha, 2012). A mycelial disc of 6 mm diameter was cut from the periphery of both antagonist cultures and the test pathogen and placed on a Petri plate with PDA media. For the control, only the test pathogen was placed in the centre of a Petri plate. The Petri plates were incubated at 35°C in darkness.

Data analysis

The inhibition percentage of mycelial growth= [(Gc-Gt)/Gc] × 100; Where, Gc = Mycelial growth in terms of colony diameter in control set, Gt= Mycelial growth in terms of colony diameter in treatment set. The inhibition percentages of Fusarium species growth were calculated using the following formula: Inhibition percentage (%) =100× (dc– dt)/dc; Where, dc = radial growth of pathogen in control, dt = radial growth of pathogen in dual culture. Mean values were compared through least significant different test using SAS software, version 9.4M5 (SAS Inc., Cary, NC, USA). All the experiment and test were replicated thrice.

Results

In vitro screening of extracts presenting antifungal activity

All plant extracts showed a degree of growth inhibition of the tested fungus at the same concentrations. The highest inhibition of growth of the isolates was observed at 68.1% of mycelium on Coccinia grandis, which was followed by 64.1% on Allium sativum, in comparison to the control culture (100.0%). Hibiscus rosa-sinensis showed the lowest inhibition of mycelium with 29.6% against the fungal isolate in comparison to the control. The results are presented in Figure 1 and Figure 2.

aa2fd04d-a75c-49bd-ad10-2818a8eef942_figure1.gif

Figure 1. Effect of different methanol plant extracts on percentage inhibition of mycelial growth of Fusarium species.

Mycelia were collected after seven days of incubation on potato dextrose agar at 35°C in darkness. 90 mm Petri plates were used to culture the tested fungus.

aa2fd04d-a75c-49bd-ad10-2818a8eef942_figure2.gif

Figure 2. Petri dish images showing the effect of plant extracts on inhibition of mycelial growth of Fusarium species.

(A) Allium sativum, (B) Zingiber officinale, (C) Coccinia grandis, (D) Brassica juncea, (E) Ocimum tenuiflorum, and (F) Hibiscus rosa-sinensis. Mycelia were collected after seven days of incubation on potato dextrose agar at 35°C in darkness.

In vitro antagonistic assay

The highest percentage inhibition of radial growth was observed with Trichoderma viride (46.01%) against Fusarium, which was followed by 43.33% and 32.05% on Escherichia coli and Rhizobium phaseoli, respectively (Figure 3). The antagonistic agent Rhizobium leguminosarum did not show any inhibitory activity against the isolated fungus (Figure 3). The control group also did not show any inhibition of radial growth of Fusarium sp.

aa2fd04d-a75c-49bd-ad10-2818a8eef942_figure3.gif

Figure 3. Effect of microbe antagonistic agents on inhibition of mycelial growth of Fusarium species.

(A) Escherichia coli, (B) Rhizobium phaseoli, (C) Rhizobium leguminosarum,(D) Neofusicoccum mangifera, and (E) Trichoderma viride and (F) Pestalotiopsis sp., Mycelia were collected after seven days of incubation on potato dextrose agar at 35°C in darkness.

Discussion

Fruit rot caused by Fusarium species is very common in Bangladesh. The main objective of the present study was to study biological control measures for this fungus. Plant extracts are now a superior choice to control different plant pathogens, as reported by several previous studies (Hasan et al., 2020; Kareem & Al-Araji, 2017; Parveen et al., 2014). In our study, we found that the plant extracts Allium sativum, Zingiber officinale, and Coccinia grandis have significant inhibitory effects on mycelial growth of Fusarium species. Hosen & Shamsi (2019) also found significant antifungal activity using Allium sativum (53.85%), Ocimum sanctum (48.72%) and Zingiber officinale (49.35%) against Fusarium solani and F. oxysporum. Our current results were also supported by data from Khatun et al. (2020) and Kareem & Al-Araji (2017). Confirmation of the potential of antagonists on the radial growth of the pathogen in dual culture have been previously reported by Akhtar et al. (2010). By contrast, Nasrin et al. (2018) reported 87% inhibition potency on mycelium growth of Fusarium oxysporum f. sp. lycopersici by Calotropis proceraon plant extract. In our study, Trichoderma viride, Escherichia coli, Rhizobium phaseoli and Alternaria sp. showed significant antagonistic activity against Fusarium species. Trichoderma viride showed 45.88% growth inhibition on Fusarium merismoides fungi in a study by Hosen & Shamsi (2019), which support our present findings. Nasrin et al. (2018) also reported 82% inhibition radial growth by Trichoderma sp. against Fusarium oxysporum f. sp. lycopersici. In contrast, Bashar & Chakma (2014) reported that volatile substances produced by T. viride, A. niger, A. flavus and A. fumigatus showed 29.75, 20.15, 15.78 and 12.25% growth inhibition, respectively, on F. oxysporum.

In the current investigation, there are some limitations. Although this study showed that some plant extracts and nonpathogenic microbes could control the fungal stain, the number of plant extracts and microbes was limited. In addition, we used only methanol solvent for extraction and did not use other extractions. Moreover, we performed only in vitro techniques for antifungal potency screening and did not use any in vivo techniques. Therefore, we need to perform further studies to detect ecofriendly control this devastating fungal stain in the future.

Conclusions

We evaluated different biological control measures for the devastating Fusarium fungi. Various medicinal plant extracts and non-pathogenic microbes showed promising inhibitory activities on Fusarium sp. in vitro. These identified control measures of Fusarium species show the importance of further research on Fusarium taxonomy to decline the risk of Fusarium-caused fruit rot in Bangladesh.

Data availability

Underlying data

Figshare: Effect of plant extracts on inhibition of mycelial growth of the Fusarium species. https://doi.org/10.6084/m9.figshare.13096262 (Hasan, 2020a). This project contains the images of Petri plates for each treatment condition.

Figshare: Effect of antagonistic agents on inhibition of mycelial growth of the Fusarium species. https://doi.org/10.6084/m9.figshare.13096325 (Hasan, 2020b). This project contains the images of Petri plates for each treatment condition.

Figshare: Effects of different plants extract by methanol on inhibition percentages of mycelial growth of the Fusarium species, https://doi.org/10.6084/m9.figshare.13134953 (Hasan, 2020c).

Figshare: Effect of antagonistic agents on inhibition of mycelial growth of the Fusarium species, https://doi.org/10.6084/m9.figshare.13134962 (Hasan, 2020d).

Data are available under the terms of the Creative Commons Attribution 4.0 International license (CC-BY 4.0).

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Hasan MF, Islam MA and Sikdar B. Evaluation of possible biological control of Fusarium sp. using plant extracts and antagonistic species of microbes in vitro [version 1; peer review: 3 approved with reservations]. F1000Research 2020, 9:1394 (https://doi.org/10.12688/f1000research.27098.1)
NOTE: If applicable, it is important to ensure the information in square brackets after the title is included in all citations of this article.
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ApprovedThe paper is scientifically sound in its current form and only minor, if any, improvements are suggested
Approved with reservations A number of small changes, sometimes more significant revisions are required to address specific details and improve the papers academic merit.
Not approvedFundamental flaws in the paper seriously undermine the findings and conclusions
Version 1
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PUBLISHED 03 Dec 2020
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Reviewer Report 15 Dec 2021
Mustafa M. El-Zayat, Unit of Genetic Engineering and Biotechnology, Mansoura University, Mansoura, Egypt 
Approved with Reservations
VIEWS 8
This research dealt with an important topic in the safe control of the fungus Fusarium sp. that causes damage to many types of fruits without the use of chemicals that represent a danger to the environment and health.
... Continue reading
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M. El-Zayat M. Reviewer Report For: Evaluation of possible biological control of Fusarium sp. using plant extracts and antagonistic species of microbes in vitro [version 1; peer review: 3 approved with reservations]. F1000Research 2020, 9:1394 (https://doi.org/10.5256/f1000research.29932.r96967)
NOTE: it is important to ensure the information in square brackets after the title is included in all citations of this article.
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Reviewer Report 26 Jul 2021
Shaikh Jamal Uddin, Pharmacy Discipline, Life Science School, Khulna University, Khulna, Bangladesh 
Approved with Reservations
VIEWS 9
Authors presented the antifungal activity of some plant extract as a eco-friendly control measure for pathogenic Fusarium species using the poisoned food method. They found some plant extracts showed promising (>65%) inhibitory activity against Fusarium sp. and suggested to use as bioagents ... Continue reading
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Uddin SJ. Reviewer Report For: Evaluation of possible biological control of Fusarium sp. using plant extracts and antagonistic species of microbes in vitro [version 1; peer review: 3 approved with reservations]. F1000Research 2020, 9:1394 (https://doi.org/10.5256/f1000research.29932.r89306)
NOTE: it is important to ensure the information in square brackets after the title is included in all citations of this article.
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Reviewer Report 13 Apr 2021
Natarajan Amaresan, C. G. Bhakta Institute of Biotechnology, Uka Tarsadia University, Surat, Gujarat, India 
Approved with Reservations
VIEWS 18
The authors are reporting some interesting results which will be of significance to the readership however, the manuscript lacks indepth research.

The effect of the bacteria and botanical extracts should be tested in the pot studies for ... Continue reading
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Amaresan N. Reviewer Report For: Evaluation of possible biological control of Fusarium sp. using plant extracts and antagonistic species of microbes in vitro [version 1; peer review: 3 approved with reservations]. F1000Research 2020, 9:1394 (https://doi.org/10.5256/f1000research.29932.r80330)
NOTE: it is important to ensure the information in square brackets after the title is included in all citations of this article.

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Alongside their report, reviewers assign a status to the article:
Approved - the paper is scientifically sound in its current form and only minor, if any, improvements are suggested
Approved with reservations - A number of small changes, sometimes more significant revisions are required to address specific details and improve the papers academic merit.
Not approved - fundamental flaws in the paper seriously undermine the findings and conclusions
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