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https://doi.org/10.12688/f1000research.24904.1
Editorial metrics NOT PEER REVIEWED
Making the most of genomic data with OMA
[version 1; peer review: not peer reviewed]
Natasha M. Glover
  • Funder
  • Swiss Institute of Bioinformatics
PUBLISHED 01 Jul 2020
https://doi.org/10.12688/f1000research.24680.1
Research Article metrics
Isolation and characterization of a novel bacterial strain from a Tris-Acetate-Phosphate agar medium plate of the green micro-alga Chlamydomonas reinhardtii that can utilize common environmental pollutants as a carbon source
[version 1; peer review: 3 approved]
Mautusi Mitra, Kevin Manoap-Anh-Khoa Nguyen, Taylor Wayland Box, Jesse Scott Gilpin, Seth Ryan Hamby, Taylor Lynne Berry, Erin Harper Duckett
Peer Reviewers Dickson Aruhomukama; Ruby A. Ynalvez; Juan Campos Guillén
  • Funder
  • University of West Georgia
PUBLISHED 29 Jun 2020
https://doi.org/10.12688/f1000research.22092.1
Review metrics
An overview of mammalian p38 mitogen-activated protein kinases, central regulators of cell stress and receptor signaling
[version 1; peer review: 2 approved]
Jiahuai Han, Jianfeng Wu, John Silke
Peer Reviewers Jonathan D. Ashwell; Guadalupe Sabio
  • Funders
  • The 111 Project
  • National Natural Science Foundation of China
  • National Health and Medical Research Council
PUBLISHED 29 Jun 2020
https://doi.org/10.12688/f1000research.14900.6
Research Article metrics
Revised
Fibroblast growth factor-6 enhances CDK2 and MATK expression in microvesicles derived from human stem cells extracted from exfoliated deciduous teeth
[version 6; peer review: 2 approved, 1 not approved]
Ahmed Othman, Rabab Mubarak, Dina Sabry
Peer Reviewers Asma Abdullah Nurul; Thanaphum Osathanon; Abbas Ali Khademi
LATEST VERSION PUBLISHED 24 Jun 2020
https://doi.org/10.12688/f1000research.18721.2
Research Article metrics
Revised
Mutation profiling of anaplastic ependymoma grade III by Ion Proton next generation DNA sequencing
[version 2; peer review: 2 approved]
Ejaz Butt, Sabra Alyami, Tahani Nageeti, Muhammad Saeed, Khalid AlQuthami, Abdellatif Bouazzaoui, Mohammad Athar, Zainularifeen Abduljaleel, Faisal Al-Allaf, Mohiuddin Taher
Peer Reviewers Luni Emdad; Firoz Ahmad
  • Funder
  • Umm-Al-Qura University
LATEST VERSION PUBLISHED 22 Jun 2020
https://doi.org/10.12688/f1000research.22554.1
Review metrics
Neuronal regulation of bone marrow stem cell niches
[version 1; peer review: 3 approved]
Claire Fielding, Simón Méndez-Ferrer
Peer Reviewers Toshio Suda; Partha Dutta; Satoshi Yamazaki
  • Funders
  • National Health Service Blood and Transplant
  • Cancer Research UK
  • Horizon 2020
  • Wellcome Trust
PUBLISHED 16 Jun 2020
https://doi.org/10.12688/f1000research.22139.2
Software Tool Article metrics
Revised
scRepertoire: An R-based toolkit for single-cell immune receptor analysis
[version 2; peer review: 2 approved]
Nicholas Borcherding, Nicholas L. Bormann, Gloria Kraus
Peer Reviewers Lorenzo Drufuca, Raoul Jean Pierre Bonnal and Massimiliano Pagani; Tim Stuart and Raoul Jean Pierre Bonnal
  • Funder
  • National Cancer Institute
LATEST VERSION PUBLISHED 15 Jun 2020
https://doi.org/10.12688/f1000research.24625.1
Review metrics
Recent advances in understanding the molecular basis of melanogenesis in melanocytes
[version 1; peer review: 2 approved]
Norihiko Ohbayashi, Mitsunori Fukuda
Peer Reviewers Subba Rao Gangi Setty; Santiago Di Pietro
  • Funders
  • Ministry of Education, Culture, Sports, Science and Technology
  • Japan Science and Technology Agency
PUBLISHED 15 Jun 2020
https://doi.org/10.12688/f1000research.23289.2
Method Article metrics
Revised
A non-fluorescent HaloTag blocker for improved measurement and visualization of protein synthesis in living cells
[version 2; peer review: 2 approved]
Laurie D. Cohen, Ayub Boulos, Noam E. Ziv
Peer Reviewers Timothy Ryan; Susanne tom Dieck
  • Funders
  • Volkswagen Foundation
  • German-Israeli Foundation for Scientific Research and Development
  • Israel Science Foundation
  • Niedersächsischen Krebsgesellschaft
LATEST VERSION PUBLISHED 08 Jun 2020
https://doi.org/10.12688/f1000research.24033.1
Case Report metrics
Case Report: Management of rectal squamous cell carcinoma - a treatment dilemma
[version 1; peer review: 1 approved, 2 approved with reservations]
Nathaniel A. Parker, Yasmine Hussein Agha, Charles Scott Buess, Daniel Lalich, Jeremy M. Deutsch
Peer Reviewers Pratiksha Singh; George S. Stoyanov; Mukesh S. Paudel
PUBLISHED 03 Jun 2020
https://doi.org/10.12688/f1000research.23780.1
Research Article metrics
Analysis of tRNACys processing under salt stress in Bacillus subtilis spore outgrowth using RNA sequencing data
[version 1; peer review: 2 approved, 2 approved with reservations]
Iván Arvizu Hernández, José Luis Hernández Flores, Juan Caballero Pérez, Héctor Gutiérrez Sánchez, Miguel Ángel Ramos López, Sergio Romero Gómez, Andrés Cruz Hernández, Carlos Saldaña Gutierrez, Erika Álvarez Hidalgo, George H. Jones, Juan Campos Guillén
Peer Reviewers Anne Moir; Jungwook Kim; Fabian M. Commichau; José E. Barboza Corona
  • Funder
  • Universidad Autónoma de Querétaro
PUBLISHED 03 Jun 2020
https://doi.org/10.12688/f1000research.23783.2
Research Article metrics
Revised
Glycoalkaloids in commercial potato varieties traded in Nairobi, Kenya
[version 2; peer review: 1 approved, 1 approved with reservations]
Consolata Nolega Musita, Michael Wandayi Okoth, George Ooko Abong', Duke Gekonge Omayio
Peer Reviewers David K. Weaver; Helen Tai
  • Funder
  • University of Nairobi
LATEST VERSION PUBLISHED 29 May 2020
https://doi.org/10.12688/f1000research.24260.1
Review metrics
Recent advances in understanding the role of leptin in energy homeostasis
[version 1; peer review: 2 approved]
Heike Münzberg, Prachi Singh, Steven B. Heymsfield, Sangho Yu, Christopher D. Morrison
Peer Reviewers Greg M Anderson; Carol F Elias
  • Funder
  • National Institutes of Health
PUBLISHED 27 May 2020
https://doi.org/10.12688/f1000research.22367.1
Review metrics
Coordination of Rheb lysosomal membrane interactions with mTORC1 activation
[version 1; peer review: 4 approved]
Brittany Angarola, Shawn M. Ferguson
Peer Reviewers Rolf Heumann; David M Sabatini and Justin Roberts; Robbie Loewith; Roberto Zoncu
  • Funder
  • National Institutes of Health
PUBLISHED 27 May 2020
https://doi.org/10.12688/f1000research.21642.2
Software Tool Article metrics
Revised
Generalized EmbedSOM on quadtree-structured self-organizing maps
[version 2; peer review: 2 approved]
Miroslav Kratochvíl, Abhishek Koladiya, Jiří Vondrášek
Peer Reviewers Evan Newell and Hugh MacMilan; Nikolay Oskolkov
  • Funders
  • Institute of Organic Chemistry and Biochemistry of the CAS
  • Ministerstvo Školství, Mládeže a Tělovýchovy
  • European Regional Development Fund
LATEST VERSION PUBLISHED 19 May 2020
https://doi.org/10.12688/f1000research.22393.1
Review metrics
Endocytosis and the internalization of pathogenic organisms: focus on phosphoinositides
[version 1; peer review: 3 approved]
Glenn F. W. Walpole, Sergio Grinstein
Peer Reviewers Volker Haucke; Tamas Balla; Joel Swanson
  • Funder
  • Canadian Institutes for Health Research
PUBLISHED 15 May 2020
https://doi.org/10.12688/f1000research.15841.2
Research Article metrics
Revised
The signs of adaptive mutations identified in the chloroplast genome of the algae endosymbiont of Baikal sponge.
[version 2; peer review: 3 approved, 1 approved with reservations]
Sergey Feranchuk, Natalia Belkova, Lubov Chernogor, Ulyana Potapova, Sergei Belikov
Peer Reviewers Michael G. Sadovsky; Roman Kondratov; Ashraf Al-Ashhab; OPhir Nave
  • Funders
  • Russian Foundation for Basic Research
  • Ministry of Education and Science of the Russian Federation
LATEST VERSION PUBLISHED 14 May 2020
https://doi.org/10.12688/f1000research.23639.1
Brief Report metrics
The IMPDH inhibitor merimepodib provided in combination with the adenosine analogue remdesivir reduces SARS-CoV-2 replication to undetectable levels in vitro
[version 1; peer review: 2 approved with reservations]
Natalya Bukreyeva, Rachel A. Sattler, Emily K. Mantlo, Timothy Wanninger, John T. Manning, Cheng Huang, Slobodan Paessler, Jerome B. Zeldis
Peer Reviewers Luka Čičin-Šain; Mahmoud Kandeel
  • Funders
  • National Center for Advancing Translational Sciences
  • Trek Therapeutics
  • National Institutes of Health
PUBLISHED 13 May 2020
https://doi.org/10.12688/f1000research.22715.1
Research Article metrics
Predicting response and toxicity to PD-1 inhibition using serum autoantibodies identified from immuno-mass spectrometry
[version 1; peer review: 2 approved]
Milena Music, Marco Iafolla, Antoninus Soosaipillai, Ihor Batruch, Ioannis Prassas, Melania Pintilie, Aaron R. Hansen, Philippe L. Bedard, Stephanie Lheureux, Anna Spreafico, Albiruni Abdul Razak, Lillian L. Siu, Eleftherios P. Diamandis
Peer Reviewers Gerasimos Sykiotis; Francesco Salvatore, Domenico Salvatore and Porcelli Tommaso
  • Funders
  • Princess Margaret Cancer Foundation
  • Merck
PUBLISHED 07 May 2020
https://doi.org/10.12688/f1000research.22115.1
Review metrics
Recent advances in the treatment of osteoarthritis
[version 1; peer review: 3 approved]
Susanne Grässel, Dominique Muschter
Peer Reviewers Changhai Ding; Andrew Pitsillides; Frank Zaucke
  • Funder
  • Deutsche Forschungsgemeinschaft
PUBLISHED 04 May 2020
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