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https://doi.org/10.12688/f1000research.15447.2
Research Article metrics
Revised
Nucleocytoplasmic distribution of S6K1 depends on the density and motility of MCF-7 cells in vitro
[version 2; peer review: 2 approved]
Viktoriia Kosach, Kateryna Shkarina, Anastasiia Kravchenko, Yuliia Tereshchenko, Evelina Kovalchuk, Larysa Skoroda, Mykhailo Krotevych, Antonina Khoruzhenko
Peer Reviewers Olivier E. Pardo; Yegor Vassetzky and Svetlana Dokudovskaya
  • Funder
  • National Academy of Sciences of Ukraine
LATEST VERSION PUBLISHED 17 Dec 2018
https://doi.org/10.12688/f1000research.10138.2
Research Article metrics
Revised
Mapping of microRNAs related to cervical cancer in Latin American human genomic variants
[version 2; peer review: 2 approved]
Milena Guerrero Flórez, Olivia Alexandra Guerrero Gómez, Jaqueline Mena Huertas, María Clara Yépez Chamorro
Peer Reviewers Juan Manuel Anzola; Subhash Mohan Agarwal
LATEST VERSION PUBLISHED 05 Dec 2018
https://doi.org/10.12688/f1000research.15511.2
Method Article metrics
Revised
Using zebrafish to study the function of nephronophthisis and related ciliopathy genes
[version 2; peer review: 3 approved]
Elisa Molinari, Simon A. Ramsbottom, Veronica Sammut, Frances E. P. Hughes, John A. Sayer
Peer Reviewers Weibin Zhou; Glenn P. Lobo; Roslyn Simms
  • Funders
  • Kidney Research UK
  • Northern Counties Kidney Research Fund
  • Medical Research Council
LATEST VERSION PUBLISHED 03 Dec 2018
https://doi.org/10.12688/f1000research.15650.2
Review metrics
Revised
Variation in RAD51 details a hub of functions: opportunities to advance cancer diagnosis and therapy
[version 2; peer review: 4 approved]
Nick LL van der Zon, Roland Kanaar, Claire Wyman
Peer Reviewers Scott W Morrical; Maria Spies; Mauro Modesti; Michael G Sehorn
  • Funders
  • NWO Exact and Natural Sciences
  • NWO Gravitation program CancerGenomiCs.nl
  • KWF Kankerbestrijding
LATEST VERSION PUBLISHED 03 Dec 2018
https://doi.org/10.12688/f1000research.16851.1
Research Article metrics
In vitro inhibitory and biofilm disruptive activities of ginger oil against Enterococcus faecalis
[version 1; peer review: 1 approved with reservations, 1 not approved]
Shahida Mohd-Said, Wee Wee Kweh, Chong Yi Than, Zamirah Zainal-Abidin, Siti Noor Adnalizawati Adnan, Safura Anita Baharin, Eason Soo
Peer Reviewers Lara Thieme and Mathias W. Pletz; Fathilah Binti Abdul Razak
  • Funder
  • Universiti Kebangsaan Malaysia
PUBLISHED 28 Nov 2018
https://doi.org/10.12688/f1000research.16146.1
Review metrics
RNA interactomics: recent advances and remaining challenges
[version 1; peer review: 2 approved]
Brigitte Schönberger, Christoph Schaal, Richard Schäfer, Björn Voß
Peer Reviewers Roland Hartmann; Lennart Randau
  • Funder
  • Bundesministerium für Bildung und Forschung
PUBLISHED 20 Nov 2018
https://doi.org/10.12688/f1000research.15788.1
Review metrics
Recent advances in understanding dominant spinocerebellar ataxias from clinical and genetic points of view
[version 1; peer review: 3 approved]
Giulia Coarelli, Alexis Brice, Alexandra Durr
Peer Reviewers Harry Orr; Bing-wen Soong; Vikram G Shakkottai
PUBLISHED 12 Nov 2018
https://doi.org/10.12688/f1000research.16473.2
Method Article metrics
Revised
Using zebrafish larval models to study brain injury, locomotor and neuroinflammatory outcomes following intracerebral haemorrhage
[version 2; peer review: 2 approved]
Siobhan Crilly, Alexandra Njegic, Sarah E. Laurie, Elisavet Fotiou, Georgina Hudson, Jack Barrington, Kirsty Webb, Helen L. Young, Andrew P. Badrock, Adam Hurlstone, Jack Rivers-Auty, Adrian R. Parry-Jones, Stuart M. Allan, Paul R. Kasher
Peer Reviewers Claire L. Gibson; Marietta Zille
  • Funders
  • Bundesministerium für Bildung und Forschung
  • Stroke Association
  • National Centre for the Replacement, Refinement and Reduction of Animals in Research
  • British Heart Foundation
LATEST VERSION PUBLISHED 08 Nov 2018
https://doi.org/10.12688/f1000research.13864.2
Research Article metrics
Revised
Loss of Zbtb32 in NOD mice does not significantly alter T cell responses.
[version 2; peer review: 2 approved]
William D. Coley, Yongge Zhao, Charles J. Benck, Yi Liu, Chie Hotta-Iwamura, M. Jubayer Rahman, Kristin V Tarbell
Peer Reviewers Hubert M. Tse; Ivan C. Gerling
  • Funder
  • National Institute of Diabetes and Digestive and Kidney Diseases
LATEST VERSION PUBLISHED 05 Nov 2018
https://doi.org/10.12688/f1000research.15534.1
Research Article metrics
Molecular and in-silico analysis of single nucleotide polymorphism targeting human TP53 gene exon 5-8 in Sudanese esophageal cancer patients
[version 1; peer review: 2 approved, 1 approved with reservations]
Rihab M. Elfaki, Mohammed S. Abdelaziz, Hisham N. Altayb, Munsoor M. Munsoor, Ahmed A. Gameel
Peer Reviewers Carlos Mario Muñetón Peña; Naoise Synnott; Hideo Baba
PUBLISHED 02 Nov 2018
https://doi.org/10.12688/f1000research.15797.1
Review metrics
Epigenomic regulation of heart failure: integrating histone marks, long noncoding RNAs, and chromatin architecture
[version 1; peer review: 2 approved]
Timothy A. McKinsey, Thomas M. Vondriska, Yibin Wang
Peer Reviewers Assam El-Osta; Gianluigi Condorelli
  • Funders
  • American Heart Association
  • National Heart, Lung, and Blood Institute
  • David Geffen School of Medicine at UCLA
  • National Institutes of Health
PUBLISHED 29 Oct 2018
https://doi.org/10.12688/f1000research.16542.1
Research Article metrics
Screening of protease, cellulase, amylase and xylanase from the salt-tolerant and thermostable marine Bacillus subtilis strain SR60
[version 1; peer review: 1 approved with reservations, 1 not approved]
Bruno Oliveira de Veras, Yago Queiroz dos Santos, Katharina Marquez Diniz, Gabriela Silva Campos Carelli, Elizeu Antunes dos Santos
Peer Reviewers Jorge Olmos-Soto; Shohreh Ariaeenejad
  • Funder
  • Universidade Federal de Pernambuco
PUBLISHED 26 Oct 2018
https://doi.org/10.12688/f1000research.16337.1
Research Article metrics
Apoptosis inducing effects of chlorhexidine and essential oil mouthwashes on BHK-21 fibroblast cell line: An in vitro study
[version 1; peer review: 1 approved, 1 not approved]
Shaimaa Ali Hamouda Ali El Basuony, Naglaa El Hossary, Nermine Raouf Amin
Peer Reviewers Marwa Mokbel ElShafei; Thomas E. Lallier
PUBLISHED 26 Oct 2018
https://doi.org/10.12688/f1000research.16290.1
Method Article metrics
A unified GenomeSpace recipe to identify essential genes and associated subnetworks from Genome-Scale CRISPR-Cas9 knockout screens
[version 1; peer review: 2 approved with reservations]
Daniel E. Carlin, Forrest Kim, Trey Ideker, Jill P. Mesirov
Peer Reviewers Shouhong Guang; Xiaowei Wang
  • Funder
  • National Human Genome Research Institute
PUBLISHED 12 Oct 2018
https://doi.org/10.12688/f1000research.15166.2
Research Article metrics
Revised
The inhibition of checkpoint activation by telomeres does not involve exclusion of dimethylation of histone H4 lysine 20 (H4K20me2)
[version 2; peer review: 2 approved, 1 not approved]
Julien Audry, Jinyu Wang, Jessica R. Eisenstatt, Kathleen L. Berkner, Kurt W. Runge
Peer Reviewers Miguel Godinho Ferreira and Toru M. Nakamura; Holger Richly; Jeffrey S. Thompson
  • Funders
  • National Institutes of Health
  • National Science Foundation
LATEST VERSION PUBLISHED 09 Oct 2018
https://doi.org/10.12688/f1000research.13964.2
Research Article metrics
Negative/null result
Revised
Needle lost in the haystack: multiple reaction monitoring fails to detect Treponema pallidum candidate protein biomarkers in plasma and urine samples from individuals with syphilis
[version 2; peer review: 2 approved]
Geert A. Van Raemdonck, Kara K. Osbak, Xaveer Van Ostade, Chris R. Kenyon
Peer Reviewers Mohd M. Khan; Timothy Palzkill
  • Funder
  • Fonds Wetenschappelijk Onderzoek
LATEST VERSION PUBLISHED 09 Oct 2018
https://doi.org/10.12688/f1000research.13196.2
Method Article metrics
Revised
Differential methylation analysis of reduced representation bisulfite sequencing experiments using edgeR
[version 2; peer review: 2 approved, 1 approved with reservations]
Yunshun Chen, Bhupinder Pal, Jane E. Visvader, Gordon K. Smyth
Peer Reviewers Simon Andrews; James W. MacDonald; Peter F.  Hickey
  • Funders
  • Victorian State Government
  • National Health and Medical Research Council
LATEST VERSION PUBLISHED 08 Oct 2018
https://doi.org/10.12688/f1000research.11376.2
Research Article metrics
Revised
Results supporting the concept of the oxidant-mediated protein amino acid conversion, a naturally occurring protein engineering process, in human cells
[version 2; peer review: 2 approved, 1 not approved]
Yuichiro J. Suzuki, Jian-Jiang Hao
Peer Reviewers Joaquim Ros; Dolores Pérez-Sala; Adelina Rogowska-Wrzesinska and Michael J. Davies 
  • Funders
  • National Heart, Lung, and Blood Institute
  • National Institute on Aging
LATEST VERSION PUBLISHED 28 Sep 2018
https://doi.org/10.12688/f1000research.16026.2
Software Tool Article metrics
Revised
DRETools: A tool-suite for differential RNA editing detection
[version 2; peer review: 1 approved, 1 approved with reservations, 1 not approved]
Tyler Weirick, Patrick Trainor, Eric Rouchka, Andrew DeFilippis, Shizuka Uchida
Peer Reviewers Ernesto Picardi; Yicheng Zhao; Graziano Pesole
  • Funders
  • Gheens Foundation
  • National Institutes of Health
  • V.V. Cooke Foundation
  • University of Louisville
LATEST VERSION PUBLISHED 19 Sep 2018
https://doi.org/10.12688/f1000research.16050.1
Research Article metrics
Biomimetic remineralization of acid etched enamel using agarose hydrogel model
[version 1; peer review: 5 approved]
Sara El Moshy, Marwa M.S. Abbass, Amal M. El-Motayam
Peer Reviewers Raneem Farouk Obeid and Radwa Taher el sharkawy; Nehad Samir Taha; Mohamed Shamel; Mahmoud M. Al-Ankily; Mahmoud M. Bakr
PUBLISHED 17 Sep 2018
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