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https://doi.org/10.12688/f1000research.7536.1
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BioShaDock: a community driven bioinformatics shared Docker-based tools registry
[version 1; peer review: 2 approved]
François Moreews, Olivier Sallou, Hervé Ménager, Yvan Le bras, Cyril Monjeaud, Christophe Blanchet, Olivier Collin
Peer Reviewers Rodrigo Lopez; Björn A. Grüning
PUBLISHED 14 Dec 2015
https://doi.org/10.12688/f1000research.7281.1
Research Note metrics
Metagenomic Chromosome Conformation Capture (3C): techniques, applications, and challenges
[version 1; peer review: 2 approved]
Michael Liu, Aaron Darling
Peer Reviewers Mick Watson; C. Titus Brown
PUBLISHED 30 Nov 2015
https://doi.org/10.12688/f1000research.7015.1
Review metrics
Transversus abdominal plane (TAP) block for postoperative pain management: a review
[version 1; peer review: 2 approved]
Jan G. Jakobsson, Liselott Wickerts, Sune Forsberg, Gustaf Ledin
Peer Reviewers Anne M Lynn; Jacques Chelly
PUBLISHED 26 Nov 2015
https://doi.org/10.12688/f1000research.5754.2
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Revised
G-Links: a gene-centric link acquisition service
[version 2; peer review: 2 approved]
Kazuki Oshita, Masaru Tomita, Kazuharu Arakawa
Peer Reviewers Mark A. Ragan and Sriganesh Srihari; Kenji Satou
LATEST VERSION PUBLISHED 18 Nov 2015
https://doi.org/10.12688/f1000research.6656.2
Software Tool Article metrics
Revised
NetMatchStar: an enhanced Cytoscape network querying app
[version 2; peer review: 2 approved]
Fabio Rinnone, Giovanni Micale, Vincenzo Bonnici, Gary D. Bader, Dennis Shasha, Alfredo Ferro, Alfredo Pulvirenti, Rosalba Giugno
Peer Reviewers Xifeng Yan; Shaillay Dogra
LATEST VERSION PUBLISHED 03 Nov 2015
https://doi.org/10.12688/f1000research.6456.1
Review metrics
Bugs, genes, fatty acids, and serotonin: Unraveling inflammatory bowel disease?
[version 1; peer review: 3 approved]
Jonathan D. Kaunitz, Piyush Nayyar
Peer Reviewers Enzo Ierardi; Rebeca Martin; Waliul I Khan
PUBLISHED 27 Oct 2015
https://doi.org/10.12688/f1000research.6030.2
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Revised
AGA: Interactive pipeline for reproducible gene expression and DNA methylation data analyses
[version 2; peer review: 2 approved]
Michael Considine, Hilary Parker, Yingying Wei, Xaio Xia, Leslie Cope, Michael Ochs, Elana Fertig
Peer Reviewers Subha Madhavan; Matthew McCall
LATEST VERSION PUBLISHED 21 Oct 2015
https://doi.org/10.12688/f1000research.7111.1
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ve-SEQ: Robust, unbiased enrichment for streamlined detection and whole-genome sequencing of HCV and other highly diverse pathogens
[version 1; peer review: 2 approved, 1 approved with reservations]
David Bonsall, M. Azim Ansari, Camilla Ip, Amy Trebes, Anthony Brown, Paul Klenerman, David Buck, STOP-HCV Consortium, Paolo Piazza, Eleanor Barnes, Rory Bowden
Peer Reviewers Fabio Luciani; Nicholas J. Loman; Tanya L Applegate and Rowena Bull
PUBLISHED 13 Oct 2015
https://doi.org/10.12688/f1000research.6944.2
Research Note metrics
Revised
The ubiquitous and ancient ER membrane protein complex (EMC): tether or not?
[version 2; peer review: 2 approved, 1 approved with reservations]
Jeremy G. Wideman
Peer Reviewers Sujoy Lahiri; Courtney Stairs; Christopher Loewen
LATEST VERSION PUBLISHED 05 Oct 2015
https://doi.org/10.12688/f1000research.7104.1
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NGSeasy: a next generation sequencing pipeline in Docker containers
[version 1; peer review: 3 approved with reservations]
Amos A Folarin, Richard JB Dobson, Stephen J Newhouse
Peer Reviewers Fabien Campagne; Brad Chapman; Michael Barton
PUBLISHED 05 Oct 2015
https://doi.org/10.12688/f1000research.6836.2
Software Tool Article metrics
Revised
iCTNet2: integrating heterogeneous biological interactions to understand complex traits
[version 2; peer review: 2 approved]
Lili Wang, Daniel S. Himmelstein, Adam Santaniello, Mousavi Parvin, Sergio E. Baranzini
Peer Reviewers Amitabh Sharma; Gary D Bader
LATEST VERSION PUBLISHED 28 Sep 2015
https://doi.org/10.12688/f1000research.6924.1
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The khmer software package: enabling efficient nucleotide sequence analysis
[version 1; peer review: 2 approved, 1 approved with reservations]
Michael R. Crusoe, Hussien F. Alameldin, Sherine Awad, Elmar Boucher, Adam Caldwell, Reed Cartwright, Amanda Charbonneau, Bede Constantinides, Greg Edvenson, Scott Fay, Jacob Fenton, Thomas Fenzl, Jordan Fish, Leonor Garcia-Gutierrez, Phillip Garland, Jonathan Gluck, Iván González, Sarah Guermond, Jiarong Guo, Aditi Gupta, Joshua R. Herr, Adina Howe, Alex Hyer, Andreas Härpfer, Luiz Irber, Rhys Kidd, David Lin, Justin Lippi, Tamer Mansour, Pamela McA'Nulty, Eric McDonald, Jessica Mizzi, Kevin D. Murray, Joshua R. Nahum, Kaben Nanlohy, Alexander Johan Nederbragt, Humberto Ortiz-Zuazaga, Jeramia Ory, Jason Pell, Charles Pepe-Ranney, Zachary N. Russ, Erich Schwarz, Camille Scott, Josiah Seaman, Scott Sievert, Jared Simpson, Connor T. Skennerton, James Spencer, Ramakrishnan Srinivasan, Daniel Standage, James A. Stapleton, Susan R. Steinman, Joe Stein, Benjamin Taylor, Will Trimble, Heather L. Wiencko, Michael Wright, Brian Wyss, Qingpeng Zhang, en zyme, C. Titus Brown
Peer Reviewers Ewan Birney; Daniel S. Katz; Rob Patro
PUBLISHED 25 Sep 2015
https://doi.org/10.12688/f1000research.6529.2
Method Article metrics
Revised
Amicon-adapted enhanced FASP: an in-solution digestion-based alternative sample preparation method to FASP
[version 2; peer review: 2 approved with reservations]
David Pellerin, Hugo Gagnon, Jean Dubé, Francois Corbin
Peer Reviewers Lloyd D. Fricker; Éric Bonneil
LATEST VERSION PUBLISHED 24 Sep 2015
https://doi.org/10.12688/f1000research.6938.1
Research Article metrics
Repository of mutations from Oman: The entry point to a national mutation database
[version 1; peer review: 3 approved]
Anna Rajab, Nishath Hamza, Salma Al Harasi, Fatma Al Lawati, Una Gibbons, Intesar Al Alawi, Karoline Kobus, Suha Hassan, Ghariba Mahir, Qasim Al Salmi, Barend Mons, Peter Robinson
Peer Reviewers Prajnya Ranganath; Shaillay Dogra; Milan Macek
PUBLISHED 23 Sep 2015
https://doi.org/10.12688/f1000research.7049.1
Research Article metrics
The ICR1000 UK exome series: a resource of gene variation in an outbred population
[version 1; peer review: 3 approved]
Elise Ruark, Márton Münz, Anthony Renwick, Matthew Clarke, Emma Ramsay, Sandra Hanks, Shazia Mahamdallie, Anna Elliott, Sheila Seal, Ann Strydom, Lunter Gerton, Nazneen Rahman
Peer Reviewers Gail Jarvik; Fiona Cunningham; Klaudia Walter
PUBLISHED 22 Sep 2015
https://doi.org/10.12688/f1000research.6078.1
Review metrics
Fatty acids from diet and microbiota regulate energy metabolism
[version 1; peer review: 2 approved]
Joe Alcock, Henry C. Lin
Peer Reviewers Rebecca Pedersen; Timothy G. Dinan
PUBLISHED 09 Sep 2015
https://doi.org/10.12688/f1000research.6894.1
Opinion Article metrics
How to avoid pitfalls in antibody use
[version 1; peer review: 2 approved]
Diana Pauly, Katja Hanack
Peer Reviewers Simon Glerup; Anita Bandrowski
PUBLISHED 07 Sep 2015
https://doi.org/10.12688/f1000research.6653.1
Review metrics
Computer-aided drug discovery
[version 1; peer review: 3 approved]
Jürgen Bajorath
Peer Reviewers Catherine Peishoff; Michael S. Lajiness; Hans Matter
PUBLISHED 26 Aug 2015
https://doi.org/10.12688/f1000research.6925.1
Software Tool Article metrics
GOsummaries: an R Package for Visual Functional Annotation of Experimental Data
[version 1; peer review: 2 approved]
Raivo Kolde, Jaak Vilo
Peer Reviewers Shaillay Dogra; Hilary Ann Coller
PUBLISHED 18 Aug 2015
https://doi.org/10.12688/f1000research.6877.1
Editorial metrics NOT PEER REVIEWED
Highlights of the first ISCB Student Council Symposium in Africa 2015
[version 1; peer review: not peer reviewed]
Yassine Souilmi, Imane Allali, Oussama Badad, Chinmay Kumar Dwibedi
PUBLISHED 17 Aug 2015
541-560 of 631 ARTICLES
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