ELIXIR

ELIXIR

ELIXIR Community White Papers

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1-14 of 14 ARTICLES
https://doi.org/10.12688/f1000research.144515.2
Opinion Article metrics
Revised
Establishing the ELIXIR Microbiome Community
[version 2; peer review: 1 approved, 1 approved with reservations]
Peer Reviewers Charlie Pauvert; Almut Heinken
  • Funders
  • CnrBiomics
  • Fundação para a Ciência e a Tecnologia
  • ELIXIRxNextGenIT
  • National Research Fund Luxembourg
  • Research Foundation Flanders
  • Biotechnology and Biological Sciences Research Council
LATEST VERSION PUBLISHED 08 Sep 2025
https://doi.org/10.12688/f1000research.166538.1
Review metrics
White paper: standards for handling and analyzing plant pan-genomes
[version 1; peer review: 2 approved with reservations]
Peer Reviewers Sunil Kumar Sahu; Xiaoming Xie
  • Funders
  • ELIXIR under the call for proposals on Biodiversity, Food Safety and Pathogens
  • Federal Ministry of Education and Research
PUBLISHED 28 Jul 2025
https://doi.org/10.12688/f1000research.146301.2
Opinion Article metrics
Revised
A research data management (RDM) community for ELIXIR
[version 2; peer review: 2 approved]
Peer Reviewers Jeff Christiansen; Sara El Gebali
  • Funders
  • ELIXIR-CONVERGE: European Union’s Horizon 2020 programme
  • FAIRplus: European Union’s Horizon 2020 programme
LATEST VERSION PUBLISHED 30 Sep 2024
https://doi.org/10.12688/f1000research.126734.2
Opinion Article metrics
Revised
Systems Biology in ELIXIR: modelling in the spotlight
[version 2; peer review: 2 approved, 1 approved with reservations]
Peer Reviewers Yoram Vodovotz; Herbert Sauro; Ioannis Androulakis
  • Funder
  • EPAnEk-NSRF
LATEST VERSION PUBLISHED 31 May 2024
https://doi.org/10.12688/f1000research.133724.2
Opinion Article metrics
Revised
The ELIXIR Biodiversity Community: Understanding short- and long-term changes in biodiversity
[version 2; peer review: 3 approved]
Peer Reviewers Patrick Comer; Abigail Benson and Stephen Formel; Cher FY Chow
  • Funders
  • Swiss State Secretariat for Education, Research and Innovation (SERI)
  • Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung
LATEST VERSION PUBLISHED 22 May 2024
https://doi.org/10.12688/f1000research.74502.2
Opinion Article metrics
Revised
ELIXIR and Toxicology: a community in development
[version 2; peer review: 2 approved]
Peer Reviewers Christopher Southan; Marta Eide
  • Funders
  • Eesti Teadusagentuur
  • Bundesministerium für Bildung und Forschung
  • LIFE programme
  • Miguel Servet
  • Agence Nationale de la Recherche
  • Horizon 2020
  • Stiftelsen Forska Utan Djurförsök
  • Wellcome Trust
  • Umweltbundesamt
  • H2020 Marie Skłodowska-Curie Actions
  • European Regional Development Fund
LATEST VERSION PUBLISHED 03 Oct 2023
https://doi.org/10.12688/f1000research.51747.1
Opinion Article metrics
The future of food and nutrition in ELIXIR
[version 1; peer review: 2 approved with reservations]
Peer Reviewers Graham King; Anu Bansal
PUBLISHED 25 Aug 2022
https://doi.org/10.12688/f1000research.122312.1
Opinion Article metrics
Community-driven ELIXIR activities in single-cell omics
[version 1; peer review: 2 approved with reservations]
Peer Reviewers Xiao-Yang Zhao; Feng Zhu
  • Funders
  • ELIXIR
  • Knut och Alice Wallenbergs Stiftelse
PUBLISHED 29 Jul 2022
https://doi.org/10.12688/f1000research.24887.1
Opinion Article metrics
The ELIXIR Human Copy Number Variations Community: building bioinformatics infrastructure for research
[version 1; peer review: 2 approved]
Peer Reviewers Antonio Rausell; Andrew Lonie
  • Funder
  • ELIXIR Hub
PUBLISHED 13 Oct 2020
https://doi.org/10.12688/f1000research.20559.1
Opinion Article metrics
A community proposal to integrate structural bioinformatics activities in ELIXIR (3D-Bioinfo Community)
[version 1; peer review: 1 approved, 3 approved with reservations]
Peer Reviewers Sjoerd Jacob De Vries and Isaure Chauvot de Beauchene; Silvio C.E Tosatto; Roland L. Dunbrack; Andras Fiser
  • Funder
  • ELIXIR
PUBLISHED 22 Apr 2020
https://doi.org/10.12688/f1000research.20136.1
Opinion Article metrics
An intrinsically disordered proteins community for ELIXIR
[version 1; peer review: 2 approved]
Peer Reviewers Iva Pritisanac and Julie Forman-Kay; Osman Ugur Sezerman
  • Funders
  • Vetenskapsrådet
  • BBSRC
  • European Molecular Biology Laboratory
  • Carlsberg Foundation Distinguished Fellowship
  • National Institutes of Health
  • Israel I-CORE Project
  • ELIXIR
  • Danmarks Grundforskningsfond
  • Instruct-ERIC
  • Swiss Federal Government
  • Marie Skłodowska-Curie
  • COST Action BM1405 NGP-net
  • Wellcome Trust
PUBLISHED 15 Oct 2019
https://doi.org/10.12688/f1000research.12342.2
Opinion Article metrics
Revised
The future of metabolomics in ELIXIR
[version 2; peer review: 3 approved]
Peer Reviewers Charles F. Burant; Carl Brunius; Emmanuel Mikros
  • Funder
  • Horizon 2020 Framework Programme
LATEST VERSION PUBLISHED 30 Oct 2017
https://doi.org/10.12688/f1000research.11751.1
Opinion Article metrics
A community proposal to integrate proteomics activities in ELIXIR
[version 1; peer review: 2 approved]
Peer Reviewers Felix Elortza; Chuming Chen
  • Funder
  • Horizon 2020
PUBLISHED 13 Jun 2017
https://doi.org/10.12688/f1000research.10443.1
Method Article metrics
ELIXIR pilot action: Marine metagenomics – towards a domain specific set of sustainable services
[version 1; peer review: 1 approved, 2 approved with reservations]
Peer Reviewers Marla I. Trindade and Leonardo van Zyl; Takashi Gojobori; Anders Blomberg
  • Funders
  • ELIXIR
  • EMBL-EBI
  • Universitetet i Tromsø
PUBLISHED 23 Jan 2017
1-14 of 14 ARTICLES
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