All Research Articles

You searched for  hackathons
21-40 of 58 ARTICLES
https://doi.org/10.12688/f1000research.8290.2
Software Tool Article metrics
Revised
dbVar structural variant cluster set for data analysis and variant comparison
[version 2; peer review: 2 approved]
Peer Reviewers Lihua Julie Zhu; Justin M. Zook
LATEST VERSION PUBLISHED 28 Feb 2017
https://doi.org/10.12688/f1000research.18238.1
Opinion Article metrics
BioHackathon series in 2013 and 2014: improvements of semantic interoperability in life science data and services
[version 1; peer review: 2 approved with reservations]
Peer Reviewers Todd J. Vision; João Moreira
  • Funder
  • National Bioscience Database Center, the Japan Science and Technology Agency (JST)
PUBLISHED 23 Sep 2019
https://doi.org/10.12688/f1000research.126840.2
Software Tool Article metrics
Revised
Gene expression data visualization tool on the o²S²PARC platform
[version 2; peer review: 2 approved]
Peer Reviewers Joost B. M. Wagenaar; Esra Neufeld
LATEST VERSION PUBLISHED 06 Feb 2023
https://doi.org/10.12688/f1000research.20415.1
Software Tool Article metrics
SNPnotes: high-throughput tissue-specific functional annotation of single nucleotide variants
[version 1; peer review: 2 approved with reservations]
Peer Reviewers Deepti Jain; Pavel P. Kuksa
PUBLISHED 22 Oct 2019
https://doi.org/10.12688/f1000research.11389.2
Software Tool Article metrics
Revised
PubRunner: A light-weight framework for updating text mining results
[version 2; peer review: 1 approved, 2 approved with reservations]
Peer Reviewers Jin-Dong Kim; Fabio Rinaldi; Julien Gobeill
  • Funders
  • National Institutes of Health
  • Vanier Canada
LATEST VERSION PUBLISHED 13 Oct 2017
https://doi.org/10.12688/f1000research.14880.4
Software Tool Article metrics
Revised
SeqAcademy: an educational pipeline for RNA-Seq and ChIP-Seq analysis
[version 4; peer review: 2 approved, 1 not approved]
Peer Reviewers Philip Ewels; Norann A. Zaghloul; Xi Chen
  • Funder
  • U.S. National Library of Medicine
LATEST VERSION PUBLISHED 22 Sep 2020
https://doi.org/10.12688/f1000research.107886.1
Editorial metrics NOT PEER REVIEWED
Lessons from a ten-year-long journey: building a student-driven computational biology society across Turkey
[version 1; peer review: not peer reviewed]
  • Funder
  • ISCB Student Council
PUBLISHED 26 Jan 2022
https://doi.org/10.12688/f1000research.20244.2
Opinion Article metrics
Revised
The de.NBI / ELIXIR-DE training platform - Bioinformatics training in Germany and across Europe within ELIXIR
[version 2; peer review: 2 approved]
Peer Reviewers Roland Krause; Loredana Le Pera and Allegra Via
  • Funders
  • Bundesministerium für Bildung und Forschung
  • Ministerium für Innovation, Wissenschaft und Forschung des Landes Nordrhein-Westfalen
LATEST VERSION PUBLISHED 11 Sep 2020
https://doi.org/10.12688/f1000research.134798.2
Software Tool Article metrics
Revised
Facilitating accessible, rapid, and appropriate processing of ancient metagenomic data with AMDirT
[version 2; peer review: 1 approved, 3 approved with reservations]
Peer Reviewers Timothy Read and Robert Petit III; Jonas Coelho Kasmanas; Intikhab Alam; Emma Griffiths
  • Funders
  • Max Planck-Harvard Research Center for the Archaeoscience of the Ancient Mediterranean
  • Carlsbergfondet
  • H2020 European Research Council
  • Nederlandse Organisatie voor Wetenschappelijk Onderzoek
  • Knut och Alice Wallenbergs Stiftelse
  • National Institutes of Health
  • Carl Tryggers Stiftelse för Vetenskaplig Forskning
  • Deutsche Forschungsgemeinschaft
  • Friedrich-Schiller-Universität Jena
  • Science for Life Laboratory National Sequencing Projects
  • Werner Siemens-Stiftung
  • Max-Planck-Gesellschaft
  • National Science Foundation
  • Leverhulme Trust
  • Svenska Forskningsrådet Formas
  • Science Foundation Ireland-Irish Research Council
  • Science Foundation Ireland Centre for Research Training in Genomics Data Science
  • Università degli Studi di Padova
  • Institut Pasteur
  • H2020 Marie Skłodowska-Curie Actions
LATEST VERSION PUBLISHED 28 May 2024
https://doi.org/10.12688/f1000research.15895.2
Software Tool Article metrics
Revised
NovoGraph: Human genome graph construction from multiple long-read de novo assemblies
[version 2; peer review: 2 approved]
Peer Reviewers Bjarni V. Halldorsson; Korbinian Schneeberger and Manish Goel
  • Funders
  • U.S. National Library of Medicine
  • Jürgen Manchot Stiftung
  • National Institutes of Health
  • National Human Genome Research Institute
LATEST VERSION PUBLISHED 10 Dec 2018
https://doi.org/10.12688/f1000research.14217.1
Software Tool Article metrics
ShinyDiversity - Understanding Alpha and Beta Diversity through Interactive Visualizations
[version 1; peer review: 1 approved, 1 approved with reservations]
Peer Reviewers Jianguo Xia; Richard E. Isaacson
  • Funder
  • U.S. National Library of Medicine
PUBLISHED 20 Apr 2018
https://doi.org/10.12688/f1000research.20408.1
Editorial metrics NOT PEER REVIEWED
Global network of computational biology communities: ISCB's Regional Student Groups breaking barriers
[version 1; peer review: not peer reviewed]
  • Funder
  • International Society for Computational Biology
PUBLISHED 02 Sep 2019
https://doi.org/10.12688/f1000research.6354.1
Software Tool Article metrics
AGRIS: providing access to agricultural research data exploiting open data on the web
[version 1; peer review: 2 approved]
Peer Reviewers Laura Privalle; Robert Paul Davey
PUBLISHED 08 May 2015
https://doi.org/10.12688/f1000research.126734.2
Opinion Article metrics
Revised
Systems Biology in ELIXIR: modelling in the spotlight
[version 2; peer review: 2 approved, 1 approved with reservations]
Peer Reviewers Yoram Vodovotz; Herbert Sauro; Ioannis Androulakis
  • Funder
  • EPAnEk-NSRF
LATEST VERSION PUBLISHED 31 May 2024
https://doi.org/10.12688/f1000research.75071.1
Software Tool Article metrics
SPARClink: an interactive tool to visualize the impact of the SPARC program
[version 1; peer review: 2 approved, 1 approved with reservations]
Peer Reviewers Tao Zeng; Karim Fouad and Abel Torres-Espin; Angela Pinot de Moira
PUBLISHED 31 Jan 2022
https://doi.org/10.12688/f1000research.25873.1
Research Article metrics PEER REVIEW DISCONTINUED
A simulation of a medical ventilator with a realistic lungs model
[version 1; peer review: 1 not approved]
Peer Reviewers Dan Stieper Karbing
  • Funder
  • Azrieli Foundation
PUBLISHED 05 Nov 2020
https://doi.org/10.12688/f1000research.23180.2
Software Tool Article metrics
Revised
Jupyter notebook-based tools for building structured datasets from the Sequence Read Archive
[version 2; peer review: 2 approved]
Peer Reviewers Zichen Wang; Shannon Ellis
  • Funders
  • National Library of Medicine, National Institutes of Health
  • Chan Zuckerberg Initiative
LATEST VERSION PUBLISHED 04 Aug 2020
https://doi.org/10.12688/f1000research.22781.2
Study Protocol metrics
Revised
Data extraction methods for systematic review (semi)automation: A living review protocol
[version 2; peer review: 2 approved]
Peer Reviewers Emma McFarlane; Matt Carter
  • Funder
  • National Institute for Health Research
LATEST VERSION PUBLISHED 08 Jun 2020
https://doi.org/10.12688/f1000research.10420.1
Editorial metrics NOT PEER REVIEWED
ISCB-Student Council Narratives: Strategical development of the ISCB-Regional Student Groups in 2016
[version 1; peer review: not peer reviewed]
  • Funder
  • International Society for Computational Biology
PUBLISHED 20 Dec 2016
https://doi.org/10.12688/f1000research.6517.1
Opinion Article metrics
Connecting Altmetric: Integrating with Institutional Publications Systems
[version 1; peer review: 1 approved, 1 approved with reservations]
Peer Reviewers John Dupuis; Philip Young
PUBLISHED 07 Jul 2015
21-40 of 58 ARTICLES
Articles
We publish a wide range of article types in science, engineering, medicine, social sciences and humanities, with no editorial biases.
Sign In
If you've forgotten your password, please enter your email address below and we'll send you instructions on how to reset your password.

The email address should be the one you originally registered with F1000.

Email address not valid, please try again

You registered with F1000 via Google, so we cannot reset your password.

To sign in, please click here.

If you still need help with your Google account password, please click here.

You registered with F1000 via Facebook, so we cannot reset your password.

To sign in, please click here.

If you still need help with your Facebook account password, please click here.

Code not correct, please try again
Email us for further assistance.
Server error, please try again.