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241-260 of 2,028 ARTICLES
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https://doi.org/10.12688/f1000research.24818.3
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Revised
β-lactamases (bla TEM, bla SHV, bla CTXM-1, bla VEB, bla OXA-1) and class C β-lactamases gene frequency in Pseudomonas aeruginosa isolated from various clinical specimens in Khartoum State, Sudan: a cross sectional study
[version 3; peer review: 2 approved]
Dina N. Abdelrahman, Aya A. Taha, Mazar M. Dafaallah, Alaa Abdelgafoor Mohammed, Abdel Rahim M. El Hussein, Ahmed I. Hashim, Yousif F. Hamedelnil, Hisham N. Altayb
Peer Reviewers Nobumichi Kobayashi; Muhammad Qasim
LATEST VERSION PUBLISHED 01 Apr 2021
https://doi.org/10.12688/f1000research.26828.1
Research Article metrics
Attitudes of healthy volunteers to genetic testing in phase 1 clinical trials
[version 1; peer review: 2 approved]
Sebastian Levesque, Thomas M. Polasek, Eric Haan, Sepehr Shakib
Peer Reviewers Martin D. Lewis; Colleen Aldous
PUBLISHED 30 Mar 2021
https://doi.org/10.12688/f1000research.28318.2
Research Article metrics
Revised
Local adaptation in populations of Mycobacterium tuberculosis endemic to the Indian Ocean Rim
[version 2; peer review: 3 approved]
Fabrizio Menardo, Liliana K. Rutaihwa, Michaela Zwyer, Sonia Borrell, Iñaki Comas, Emilyn Costa Conceição, Mireia Coscolla, Helen Cox, Moses Joloba, Horng-Yunn Dou, Julia Feldmann, Lukas Fenner, Janet Fyfe, Qian Gao, Darío García de Viedma, Alberto L. Garcia-Basteiro, Sebastian M. Gygli, Jerry Hella, Hellen Hiza, Levan Jugheli, Lujeko Kamwela, Midori Kato-Maeda, Qingyun Liu, Serej D. Ley, Chloe Loiseau, Surakameth Mahasirimongkol, Bijaya Malla, Prasit Palittapongarnpim, Niaina Rakotosamimanana, Voahangy Rasolofo, Miriam Reinhard, Klaus Reither, Mohamed Sasamalo, Rafael Silva Duarte, Christophe Sola, Philip Suffys, Karla Valeria Batista Lima, Dorothy Yeboah-Manu, Christian Beisel, Daniela Brites, Sebastien Gagneux
Peer Reviewers Tanvi Honap; Miguel Viveiros and João Perdigão; Ola B. Brynildsrud
  • Funders
  • Swiss National Science Foundation
  • European Research Council
LATEST VERSION PUBLISHED 29 Mar 2021
https://doi.org/10.12688/f1000research.26771.2
Software Tool Article metrics
Revised
HPAStainR: a Bioconductor and Shiny app to query protein expression patterns in the Human Protein Atlas
[version 2; peer review: 3 approved]
Tim O. Nieuwenhuis, Marc K. Halushka
Peer Reviewers Mazdak Salavati; Laurent Gatto; Yasin Kaymaz
  • Funders
  • National Heart, Lung, and Blood Institute
  • National Institutes of Health
LATEST VERSION PUBLISHED 22 Mar 2021
https://doi.org/10.12688/f1000research.22989.2
Systematic Review metrics
Revised
Nitride oxide synthase 3 and klotho gene polymorphisms in the pathogenesis of chronic kidney disease and age-related cognitive impairment: a systematic review and meta-analysis
[version 2; peer review: 2 approved]
Atma Gunawan, Jonny Karunia Fajar, Fredo Tamara, Aditya Indra Mahendra, Muhammad Ilmawan, Yeni Purnamasari, Dessy Aprilia Kartini, Eden Suryoiman Winoto, Efriko Septananda Saifillah, Dewi Sri Wulandari, Pratista Adi Krisna, Ema Dianita Mayasari, Tri Wahyudi Iman Dantara, Ramadi Satryo Wicaksono, Djoko Wahono Soeatmadji
Peer Reviewers Hongliang Zhang; Sang Won Park
LATEST VERSION PUBLISHED 19 Mar 2021
https://doi.org/10.12688/f1000research.23740.2
Research Article metrics
Revised
Morphological and genetic evaluation of the thumbprint emperor, Lethrinus harak (Forsskål, 1775) in the Pacific and Indian Oceans
[version 2; peer review: 2 approved, 2 approved with reservations]
Muhammad Afrisal, Yukio Iwatsuki, Andi Iqbal Burhanuddin
Peer Reviewers Jayasankar Pallipuram; Femy Mahmud Sahami; Arvind Kumar Dwivedi; Siti Azizah Mohd Nor
  • Funder
  • Direktorat Jenderal Pendidikan Tinggi
LATEST VERSION PUBLISHED 16 Mar 2021
https://doi.org/10.12688/f1000research.27309.1
Data Note metrics
The complete genome sequences of two species of seventeen-year cicadas: Magicicada septendecim and Magicicada septendecula
[version 1; peer review: 2 approved with reservations]
Harold B. White, Stacy Pirro
Peer Reviewers Hu Li; Shuai Zhan
  • Funder
  • Iridian Genomes
PUBLISHED 16 Mar 2021
https://doi.org/10.12688/f1000research.51479.1
Brief Report metrics
Most Japanese individuals are genetically predisposed to recognize an immunogenic protein fragment shared between COVID-19 and common cold coronaviruses
[version 1; peer review: 2 approved, 1 approved with reservations]
Johannes M. Dijkstra, Aaron P. Frenette, Brian Dixon
Peer Reviewers Brian M. Baker; Andrea J. Sant; Anna Gil
PUBLISHED 10 Mar 2021
https://doi.org/10.12688/f1000research.27532.2
Brief Report metrics
Revised
Genome-wide screening of upstream transcription factors using an expression library
[version 2; peer review: 2 approved]
Naoya Yahagi, Yoshinori Takeuchi
Peer Reviewers Kazuhiko Igarashi; Harukazu Suzuki
  • Funders
  • Suzuken Memorial Foundation
  • SENSHIN Medical Research Foundation
  • Japan Foundation for Applied Enzymology
  • Ministry of Education, Culture, Sports, Science and Technology
  • Uehara Memorial Foundation
  • Naito Foundation
  • Okinaka Memorial Institute for Medical Research
  • Takeda Science Foundation
  • Japan Heart Foundation
  • Kanae Foundation for the Promotion of Medical Science
  • Ono Medical Research Foundation
  • Nakatani Foundation for Advancement of Measuring Technologies in Biomedical Engineering
  • Senri Life Science Foundation
LATEST VERSION PUBLISHED 08 Mar 2021
https://doi.org/10.12688/f1000research.25019.2
Brief Report metrics
Revised
H3S28P Antibody Staining of Okinawan Oikopleura dioica Suggests the Presence of Three Chromosomes
[version 2; peer review: 2 approved]
Andrew W. Liu, Yongkai Tan, Aki Masunaga, Aleksandra Bliznina, Charlotte West, Charles Plessy, Nicholas M. Luscombe
Peer Reviewers Haiyang Feng; Shigeki Fujiwara
LATEST VERSION PUBLISHED 01 Mar 2021
https://doi.org/10.12688/f1000research.51192.1
Research Article metrics PEER REVIEW DISCONTINUED
Measure of unevenness in human genomes, described as a self-affine phase transition in a 'spin-chain’ model
[version 1; peer review: 1 not approved]
Sergey Feranchuk
Peer Reviewers Ying Ji
PUBLISHED 25 Feb 2021
https://doi.org/10.12688/f1000research.51143.1
Software Tool Article metrics
periodicDNA: an R/Bioconductor package to investigate k-mer periodicity in DNA
[version 1; peer review: 1 approved, 3 approved with reservations]
Jacques Serizay, Julie Ahringer
Peer Reviewers Ilya Ioshikhes; Sabarinathan Radhakrishnan; Eugene Korotkov; Boris Lenhard
  • Funders
  • Wellcome Trust Senior Research Fellowship
  • Medical Research Council DTP studentship
PUBLISHED 24 Feb 2021
https://doi.org/10.12688/f1000research.26848.2
Software Tool Article metrics
Revised
CompoundHetVIP: Compound Heterozygous Variant Identification Pipeline
[version 2; peer review: 2 approved]
Dustin B. Miller, Stephen R. Piccolo
Peer Reviewers Soohyun Lee; Sushant Patil
LATEST VERSION PUBLISHED 10 Feb 2021
https://doi.org/10.12688/f1000research.27800.1
Research Article metrics
Influence of polymorphisms in the vascular endothelial growth factor gene on allograft rejection after kidney transplantation: a meta-analysis
[version 1; peer review: 2 approved]
Thanee Eiamsitrakoon, Phuntila Tharabenjasin, Noel Pabalan, Hamdi Jarjanazi, Adis Tasanarong
Peer Reviewers Ileana Constantinescu and Ion Maruntelu; Iman Karimzadeh
PUBLISHED 10 Feb 2021
https://doi.org/10.12688/f1000research.29978.1
Research Article metrics
Differential activation of c-Fos and Egr1 during development of the mouse visual cortex
[version 1; peer review: 1 approved, 1 approved with reservations]
Anna Ivanova, Pavel Rogozin, Grigori Enikolopov, Konstantin Anokhin, Alexander Lazutkin
Peer Reviewers Alison Barth; Marina Yu Khodanovich
  • Funders
  • Ministry of Science and Higher Education of the Russian Federation
  • Russian Science Foundation
PUBLISHED 08 Feb 2021
https://doi.org/10.12688/f1000research.28291.1
Research Article metrics
Analysis of rs1048943 in the CYP1A1 gene in laryngeal cancer - a case control study
[version 1; peer review: 1 approved with reservations, 1 not approved]
Marwa Abdalwahab, Mona Ellaithi
Peer Reviewers Vijaylakshmi Jain; Tracie Cheng
PUBLISHED 05 Feb 2021
https://doi.org/10.12688/f1000research.25713.2
Software Tool Article metrics
Revised
VIRdb 2.0: Interactive analysis of comorbidity conditions associated with vitiligo pathogenesis using co-expression network-based approach
[version 2; peer review: 1 approved, 2 approved with reservations]
Priyansh Srivastava, Mehak Talwar, Aishwarya Yadav, Alakto Choudhary, Sabyasachi Mohanty, Samuel Bharti, Priyanka Narad, Abhishek Sengupta
Peer Reviewers Dinesh Gupta; Mitesh Dwivedi and Rasheedunnisa Begum; Animesh A Sinha
LATEST VERSION PUBLISHED 01 Feb 2021
https://doi.org/10.12688/f1000research.24854.2
Research Article metrics
Revised
Detection of antifungal drug-resistant and ERG11 gene mutations among clinical isolates of Candida species isolated from Khartoum, Sudan.
[version 2; peer review: 2 approved, 1 not approved]
Ahmed Osman Mohamed, Malik Suliman Mohamed, Mohamed Abdelrahman Hussain, Ibrahim Fatahalrahman Ahmed
Peer Reviewers Rasoul Mohammadi; Raja Ahsan Aftab; Muhammad Sajid Hamid Akash
LATEST VERSION PUBLISHED 29 Jan 2021
https://doi.org/10.12688/f1000research.47692.1
Research Article metrics
Complex haploinsufficient interaction between APC11 and CYCLIN A1;2/TARDY ASYNCHRONOUS MEIOSIS in embryo development and seed germination in Arabidopsis
[version 1; peer review: 2 not approved]
Ming Yang, Yixing Wang, Lei Guo, Chun-Ming Liu
Peer Reviewers Xing-You Gu and Bhupinder Singh Batth; Takashi Hirayama
  • Funder
  • Ministry of Science and Technology of the People's Republic of China
PUBLISHED 28 Jan 2021
https://doi.org/10.12688/f1000research.23712.4
Research Article metrics
Revised
Eggshell membrane for DNA sexing of the endangered Maleo (Macrocephalon maleo)
[version 4; peer review: 2 approved]
Pramana Yuda, Andie Wijaya Saputra
Peer Reviewers Sena Adi Subrata; Jessica Worthington Wilmer
  • Funders
  • E-PASS Project
  • Universitas Atma Jaya Yogyakarta
LATEST VERSION PUBLISHED 28 Jan 2021
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