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https://doi.org/10.12688/f1000research.14133.2
Review metrics
Revised
Role of extracellular matrix in breast cancer development: a brief update
[version 2; peer review: 2 approved, 1 not approved]
Manoj Kumar Jena, Jagadeesh Janjanam
Peer Reviewers Andrew R. Craig; Yunus A. Luqmani; Ren Xu
LATEST VERSION PUBLISHED 12 Jun 2018
https://doi.org/10.12688/f1000research.11236.2
Review metrics
Revised
Autophagy and airway fibrosis: Is there a link?
[version 2; peer review: 3 approved]
Anudeep Kota, Deepak A. Deshpande, Mehra Haghi, Brian Oliver, Pawan Sharma
Peer Reviewers Eugene Roscioli; Kimberley C.W. Wang; Sukhwinder Singh Sohal
  • Funders
  • National Health and Medical Research Council
  • Centre for Health Technologies, University of Technology Sydney
  • National Institutes of Health
LATEST VERSION PUBLISHED 11 Jun 2018
https://doi.org/10.12688/f1000research.14148.2
Software Tool Article metrics
Revised
segment_liftover : a Python tool to convert segments between genome assemblies
[version 2; peer review: 2 approved]
Bo Gao, Qingyao Huang, Michael Baudis
Peer Reviewers Oscar Krijgsman; Ryan K. Dale
  • Funders
  • China Scholarship Council
  • Universität Zürich
LATEST VERSION PUBLISHED 08 Jun 2018
https://doi.org/10.12688/f1000research.14969.1
Research Article metrics
Reversal learning paradigm reveals deficits in cognitive flexibility in the Fmr1 knockout male mouse
[version 1; peer review: 1 approved, 2 approved with reservations]
Suzanne O. Nolan, Joaquin N. Lugo
Peer Reviewers Laura Smith; Andre Fenton; Lisa Monteggia
  • Funder
  • National Institute of Neurological Disorders and Stroke
PUBLISHED 07 Jun 2018
https://doi.org/10.12688/f1000research.12418.2
Research Article metrics
Revised
Hepatic deletion of p110α and p85α results in insulin resistance despite sustained IRS1-associated phosphatidylinositol kinase activity
[version 2; peer review: 2 approved, 1 approved with reservations]
Aditi Chaudhari, Katarina Ejeskär, Yvonne Wettergren, C. Ronald Kahn, Victoria Rotter Sopasakis
Peer Reviewers James R. Woodgett and Prital Patel; Lily Q. Dong; Richard Z. Lin and Lisa Ballou
  • Funders
  • Vetenskapsrådet
  • Stiftelserna Wilhelm och Martina Lundgren
  • Magnus Bergvalls Stiftelse
  • National Institutes of Health
  • Sahlgrenska Akademin
LATEST VERSION PUBLISHED 05 Jun 2018
https://doi.org/10.12688/f1000research.14834.1
Research Article metrics
What does it mean if a patient is positive for anti-Jo-1 in routine hospital practice? A retrospective nested case-control study
[version 1; peer review: 2 approved]
Paresh Jobanputra, Feryal Malick, Emma Derrett-Smith, Tim Plant, Alex Richter
Peer Reviewers Robert Cooper; Stephen Adelstein and MaiAnh Nguyen
PUBLISHED 04 Jun 2018
https://doi.org/10.12688/f1000research.13256.2
Method Article metrics
Revised
META-pipe Authorization service
[version 2; peer review: 2 approved]
Inge Alexander Raknes, Lars Ailo Bongo
Peer Reviewers Mikael Linden; Frank Oliver Glöckner
  • Funders
  • Norges Forskningsråd
  • Horizon 2020 Framework Programme
LATEST VERSION PUBLISHED 01 Jun 2018
https://doi.org/10.12688/f1000research.13383.2
Research Article metrics
Revised
Alternative splice variants of rhomboid proteins: Comparative analysis of database entries for select model organisms and validation of functional potential
[version 2; peer review: 2 approved, 1 not approved]
Joshua Powles, Kenton Ko
Peer Reviewers Martin Kollmar; Lu-Yuan Li; Yuriy L. Orlov
  • Funders
  • Natural Sciences and Engineering Research Council of Canada
  • Queen's University, Kingston, Ontario, Canada
LATEST VERSION PUBLISHED 31 May 2018
https://doi.org/10.12688/f1000research.13842.1
Review metrics
Enhancer functions in three dimensions: beyond the flat world perspective
[version 1; peer review: 3 approved]
Anita Göndör, Rolf Ohlsson
Peer Reviewers Walter Schaffner; Melissa J Fullwood; Philippe Collas
PUBLISHED 30 May 2018
https://doi.org/10.12688/f1000research.13457.2
Research Article metrics
Revised
Successful CRISPR/Cas9 mediated homologous recombination in a chicken cell line
[version 2; peer review: 3 approved]
Ekaterina Antonova, Olga Glazova, Anna Gaponova, Aykaz Eremyan, Svetlana Zvereva, Natalya Grebenkina, Natalya Volkova, Pavel Volchkov
Peer Reviewers Zhiying Zhang and Kun Xu; Lei Qi; Fedor V. Karginov
  • Funder
  • Russian Science Foundation
LATEST VERSION PUBLISHED 30 May 2018
https://doi.org/10.12688/f1000research.14561.1
Software Tool Article metrics
­­­A web resource for nutrient use efficiency-related genes, quantitative trait loci and microRNAs in important cereals and model plants
[version 1; peer review: 2 approved]
Anuj Kumar, Ajay Pandeya, Girik Malik, Mansi Sharma, Hima Kumari P., Anil Kumar S., Vijay Gahlaut, M.N.V. Prasad Gajula, Krishna Pal Singh, Prashanth Suravajhala, Harindra Singh Balyan, Pushpendra K. Gupta
Peer Reviewers Rajib Bandopadhyay; Vishal Acharya
PUBLISHED 29 May 2018
https://doi.org/10.12688/f1000research.12360.2
Research Article metrics
Revised
Effectiveness of model-based clustering in analyzing Plasmodium falciparum RNA-seq time-course data
[version 2; peer review: 1 approved, 1 approved with reservations, 1 not approved]
Jelili Oyelade, Itunuoluwa Isewon, Damilare Olaniyan, Solomon O Rotimi, Jumoke Soyemi
Peer Reviewers Hilary Ann Coller; Thomas D Otto; Ashis Das, P.A. Boopathi and Shibashish Choudhury
LATEST VERSION PUBLISHED 25 May 2018
https://doi.org/10.12688/f1000research.14683.1
Research Article metrics
Molecular characterization of hookworm spp. isolated from food handlers, Khartoum, Sudan: A cross-sectional study
[version 1; peer review: 2 approved with reservations]
Tarig A. Gamar, Hassan H. Musa, Hisham N. Altayb, Mohamed H. Mohamed, Adam D. Abakar
Peer Reviewers Luis Fernando Viana Furtado and Vivian Jordania da Silva; Nicole Gottdenker
PUBLISHED 24 May 2018
https://doi.org/10.12688/f1000research.14776.2
Software Tool Article metrics
Revised
Automation of ReactomeFIViz via CyREST API
[version 2; peer review: 2 approved]
Fred Loney, Guanming Wu
Peer Reviewers Marina Piccirillo; John H. Morris
  • Funder
  • National Institutes of Health
LATEST VERSION PUBLISHED 23 May 2018
https://doi.org/10.12688/f1000research.14736.1
Research Article metrics
Antimicrobial peptide LL-37 and recombinant human mannose-binding lectin express distinct age- and pathogen-specific antimicrobial activity in human newborn cord blood in vitro
[version 1; peer review: 2 approved]
Annette Scheid, Ning Li, Carleen Jeffers, Francesco Borriello, Sweta Joshi, Al Ozonoff, Matthew Pettengill, Ofer Levy
Peer Reviewers Cinzia Auriti; Jerrold Weiss
  • Funders
  • Shire
  • National Institutes of Health
  • Compagnia di San Paolo
  • National Institute of Allergy and Infectious Diseases
  • U.S. Department of Health and Human Services
  • Boston Children's Hospital
  • Università degli Studi di Napoli Federico II
  • Gates Foundation
PUBLISHED 21 May 2018
https://doi.org/10.12688/f1000research.13496.2
Research Article metrics
Revised
Evaluation of the potential defensive strategy against Influenza A in cell line models
[version 2; peer review: 2 approved]
Ekaterina Antonova, Olga Glazova, Anna Gaponova, Aykaz Eremyan, Natalya Grebenkina, Svetlana Zvereva, Natalya Volkova, Pavel Volchkov
Peer Reviewers Gillian M Air; Laurence S. Tiley
  • Funder
  • Russian Science Foundation
LATEST VERSION PUBLISHED 16 May 2018
https://doi.org/10.12688/f1000research.14753.1
Method Article metrics
The use of PrP transgenic Drosophila to replace and reduce vertebrate hosts in the bioassay of mammalian prion infectivity
[version 1; peer review: 2 approved]
Alana M. Thackray, Olivier Andréoletti, Raymond Bujdoso
Peer Reviewers Janne M Toivonen; James Alibhai and Siddharthan Chandran
  • Funder
  • National Centre for the Replacement Refinement and Reduction of Animals in Research
PUBLISHED 15 May 2018
https://doi.org/10.12688/f1000research.13254.2
Software Tool Article metrics
Revised
Simulation and visualization of multiple KEGG pathways using BioNSi
[version 2; peer review: 2 approved, 1 approved with reservations]
Adva Yeheskel, Adam Reiter, Metsada Pasmanik-Chor, Amir Rubinstein
Peer Reviewers Aurélien Naldi; Giovanni Scardoni; Ester Feldmesser and Bareket Dassa
LATEST VERSION PUBLISHED 14 May 2018
https://doi.org/10.12688/f1000research.14785.1
Brief Report metrics
Long non-coding RNA LINC00987 may function as a tumor suppressor in lung adenocarcinoma
[version 1; peer review: 1 approved with reservations, 1 not approved]
Adrian Salavaty, Zahra Rezvani, Ali Najafi
Peer Reviewers Antonio Marco; Wen Cai Zhang
PUBLISHED 04 May 2018
https://doi.org/10.12688/f1000research.14383.1
Case Report metrics
Case Report: Exome sequencing reveals recurrent RETSAT mutations and a loss-of-function POLDIP2 mutation in a rare undifferentiated tongue sarcoma
[version 1; peer review: 3 approved]
Jason Y. K. Chan, Peony Hiu Yan Poon, Yong Zhang, Cherrie W. K. Ng, Wen Ying Piao, Meng Ma, Kevin Y. Yip, Amy B. W. Chan, Vivian Wai Yan Lui
Peer Reviewers Tsung Lin Yang; Marietta Tan; Robin Jones
  • Funders
  • Research Grants Council, University Grants Committee
  • Chinese University of Hong Kong
  • Hong Kong Cancer Fund
  • Dr Stanley Ho Medical Foundation
PUBLISHED 26 Apr 2018
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