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https://doi.org/10.12688/f1000research.9762.1
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Viewing RNA-seq data on the entire human genome
[version 1; peer review: 3 approved]
Eric M. Weitz, Lorena Pantano, Jingzhi Zhu, Bennett Upton, Ben Busby
Peer Reviewers Chase A. Miller; Christopher J. Fields; Philip Ewels
  • Funder
  • National Institutes of Health
PUBLISHED 28 Apr 2017
https://doi.org/10.12688/f1000research.10788.1
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Recent advances in predicting gene–disease associations
[version 1; peer review: 2 approved]
Kenneth Opap, Nicola Mulder
Peer Reviewers Kathryn Burdon; Meridee Wouters
  • Funder
  • National Institutes of Health
PUBLISHED 26 Apr 2017
https://doi.org/10.12688/f1000research.11366.1
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Looking into Pandora's Box: The Content of Sci-Hub and its Usage
[version 1; peer review: 2 approved, 2 approved with reservations]
Bastian Greshake
Peer Reviewers April Hathcock; Gabriel Gardner and Stephen McLaughlin; Jill Emery; Balázs Bodó
PUBLISHED 21 Apr 2017
https://doi.org/10.12688/f1000research.11223.1
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GenRank: a R/Bioconductor package for prioritization of candidate genes
[version 1; peer review: 2 not approved]
Chakravarthi Kanduri, Irma Järvelä
Peer Reviewers Joshua W. K. Ho; Emma E. Laing and Carla Moller-Levet
  • Funder
  • Helsingin Yliopisto
PUBLISHED 11 Apr 2017
https://doi.org/10.12688/f1000research.11254.1
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DangerTrack: A scoring system to detect difficult-to-assess regions
[version 1; peer review: 2 approved, 1 approved with reservations]
Igor Dolgalev, Fritz Sedlazeck, Ben Busby
Peer Reviewers Melissa A. Gymrek and Nima Mousavi; Justin M. Zook; Andrew Carroll
  • Funders
  • U.S. National Library of Medicine
  • National Institutes of Health
  • National Science Foundation
PUBLISHED 07 Apr 2017
https://doi.org/10.12688/f1000research.8839.3
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Revised
A cross-package Bioconductor workflow for analysing methylation array data
[version 3; peer review: 4 approved]
Jovana Maksimovic, Belinda Phipson, Alicia Oshlack
Peer Reviewers Timothy J Peters; Peter F.  Hickey; Michael I. Love; Davide Risso
LATEST VERSION PUBLISHED 05 Apr 2017
https://doi.org/10.12688/f1000research.11175.1
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WTFgenes: What's The Function of these genes? Static sites for model-based gene set analysis
[version 1; peer review: 2 approved with reservations]
Christopher J. Mungall, Ian H. Holmes
Peer Reviewers Cedric Simillion; Ruth Isserlin
  • Funders
  • U.S. Department of Energy
  • National Human Genome Research Institute
PUBLISHED 04 Apr 2017
https://doi.org/10.12688/f1000research.10569.2
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Revised
AR2, a novel automatic muscle artifact reduction software method for ictal EEG interpretation: Validation and comparison of performance with commercially available software
[version 2; peer review: 2 approved]
Shennan Aibel Weiss, Ali A Asadi-Pooya, Sitaram Vangala, Stephanie Moy, Dale H Wyeth, Iren Orosz, Michael Gibbs, Lara Schrader, Jason Lerner, Christopher K Cheng, Edward Chang, Rajsekar Rajaraman, Inna Keselman, Perdro Churchman, Christine Bower-Baca, Adam L Numis, Michael G Ho, Lekha Rao, Annapoorna Bhat, Joanna Suski, Marjan Asadollahi, Timothy Ambrose, Andres Fernandez, Maromi Nei, Christopher Skidmore, Scott Mintzer, Dawn S Eliashiv, Gary W Mathern, Marc R Nuwer, Michael Sperling, Jerome Engel Jr, John M Stern
Peer Reviewers Patrícia Figueiredo and Rodolfo Abreu; David M. Groppe and Rodolfo Abreu
  • Funder
  • Epilepsy Foundation
LATEST VERSION PUBLISHED 04 Apr 2017
https://doi.org/10.12688/f1000research.6706.2
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Revised
PSFC: a Pathway Signal Flow Calculator App for Cytoscape
[version 2; peer review: 2 approved]
Lilit Nersisyan, Graham Johnson, Megan Riel-Mehan, Alexander R Pico, Arsen Arakelyan
Peer Reviewers David Ruckerbauer; Maarten Altelaar and Linsey Raaijmakers
LATEST VERSION PUBLISHED 03 Apr 2017
https://doi.org/10.12688/f1000research.10696.1
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Wars between microbes on roots and fruits
[version 1; peer review: 3 approved]
Ben Lugtenberg, Daniel E. Rozen, Faina Kamilova
Peer Reviewers Choong-Min Ryu; Rainer Borriss; Corné Pieterse
PUBLISHED 27 Mar 2017
https://doi.org/10.12688/f1000research.9837.1
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Extending TCGA queries to automatically identify analogous genomic data from dbGaP
[version 1; peer review: 2 approved, 1 approved with reservations]
Erin K. Wagner, Satyajeet Raje, Liz Amos, Jessica Kurata, Abhijit S. Badve, Yingquan Li, Ben Busby
Peer Reviewers Yussanne Ma and Victoria Trinh; Konstantinos Krampis; Tsung-Jung Wu
  • Funders
  • U.S. National Library of Medicine
  • Frances Berger Foundation Fellowship
  • Ramesh Kesanupalli Family
  • Beckman Research Institute, City of Hope
PUBLISHED 24 Mar 2017
https://doi.org/10.12688/f1000research.10739.1
Review metrics
Recent advances in understanding spondyloarthritis
[version 1; peer review: 2 approved]
J.S.H. Gaston
Peer Reviewers Denis Poddubnyy; Robert A. Colbert
PUBLISHED 22 Mar 2017
https://doi.org/10.12688/f1000research.10936.2
Research Note metrics
Revised
Bibliometric analysis of Oropouche research: impact on the surveillance of emerging arboviruses in Latin America
[version 2; peer review: 3 approved]
Carlos Culquichicón, Jaime A. Cardona-Ospina, Andrés M. Patiño-Barbosa, Alfonso J. Rodriguez-Morales
Peer Reviewers Kateryna Kon; Luis Cuauhtémoc Haro-García; Rodrigo Nogueira Angerami
LATEST VERSION PUBLISHED 17 Mar 2017
https://doi.org/10.12688/f1000research.10280.1
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Insight into skin cell-based osteogenesis: a review
[version 1; peer review: 2 approved]
Tingliang Wang, Lian Zhu, Ming Pei
Peer Reviewers Zulma Gazit; Gordana Vunjak-Novakovic
  • Funders
  • Musculoskeletal Transplant Foundation
  • National Institutes of Health
PUBLISHED 17 Mar 2017
https://doi.org/10.12688/f1000research.9742.2
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Revised
whoishRisk – an R package to calculate WHO/ISH cardiovascular risk scores for all epidemiological subregions of the world
[version 2; peer review: 3 approved]
Dylan Collins, Joseph Lee, Niklas Bobrovitz, Constantinos Koshiaris, Alison Ward, Carl J. Heneghan
Peer Reviewers Raivo Kolde; Scott A. Chamberlain; Maria Suarez-Diez
LATEST VERSION PUBLISHED 08 Mar 2017
https://doi.org/10.12688/f1000research.10892.1
Research Article metrics
The impact factor of an open access journal does not contribute to an article’s citations
[version 1; peer review: 2 approved]
SK Chua, Ahmad M Qureshi, Vijay Krishnan, Dinker R Pai, Laila B Kamal, Sharmilla Gunasegaran, MZ Afzal, Lahiru Ambawatta, JY Gan, PY Kew, Than Winn, Suneet Sood
Peer Reviewers Eleftherios P Diamandis; Samiran Nundy
PUBLISHED 02 Mar 2017
https://doi.org/10.12688/f1000research.10416.1
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Lyssaviruses and rabies: current conundrums, concerns, contradictions and controversies
[version 1; peer review: 2 approved]
Charles Rupprecht, Ivan Kuzmin, Francois Meslin
Peer Reviewers Nicholas Johnson; James Childs
PUBLISHED 23 Feb 2017
https://doi.org/10.12688/f1000research.10313.1
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Recent advances in plant-herbivore interactions
[version 1; peer review: 2 approved]
Deron E. Burkepile, John D. Parker
Peer Reviewers Walter Carson; Oswald Schmitz
PUBLISHED 08 Feb 2017
https://doi.org/10.12688/f1000research.10637.1
Research Note metrics
Health care and social media: What patients really understand
[version 1; peer review: 2 approved]
Kyle Hoedebecke, Lindsey Beaman, Joy Mugambi, Sanam Shah, Marwa Mohasseb, Cheyanne Vetter, Kim Yu, Irini Gergianaki, Emily Couvillon
Peer Reviewers Shailendra Prasad; Shabir A. H. Moosa
PUBLISHED 08 Feb 2017
https://doi.org/10.12688/f1000research.10114.3
Research Note metrics
Revised
Optimal threshold estimation for binary classifiers using game theory
[version 3; peer review: 3 approved]
Ignacio Enrique Sanchez
Peer Reviewers Pieter Meysman; Luis Diambra; Marcel Brun and Arjen ten Have
LATEST VERSION PUBLISHED 08 Feb 2017
721-740 of 1,017 ARTICLES
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