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https://doi.org/10.12688/f1000research.26452.1
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Lessons learned in virulence factor identification and data management from a hackathon on microbial virulence
[version 1; peer review: 1 approved, 1 approved with reservations]
Brett E. Pickett, Ryan Connor, Tamiru Berhanu-Denka, Sherry Bhalla, Vyacheslav Brover, Michael James Chambers, Kumardeep Chaudhary, Ousmane H. Cissé, Allissa Dillman, Moamen M. Elmassry, Michael Feldgarden, Eric Holloway, Xin Huang, William Klimke, Catarina Inês Mendes, S. Elizabeth Norred, Jonathan Parkinson, Samantha Sevilla, Monica Garcia Solache, Defne Surujon, Udana Torian, Vadim Zalunin, Ben Busby
Peer Reviewers Rick Stevens and James Davis; Kevin Tyler
  • Funders
  • Fundação para a Ciência e a Tecnologia
  • Scientific and Technological Research Council of Turkey
  • Intramural Research Program of the National Library of Medicine
PUBLISHED 09 Feb 2022
https://doi.org/10.12688/f1000research.28225.2
Research Article metrics
Revised
Human Proteinase 3, an important autoantigen of c-ANCA associated vasculitis, shares cross-reactive epitopes with serine protease allergens from mites: an in silico analysis
[version 2; peer review: 1 approved, 2 approved with reservations]
Emiro Buendía, Múnera Marlon, Orlando Parra, María Sánchez, Andrés Sánchez, Jorge Sánchez, Diego Viasus
Peer Reviewers Chandrabose Selvaraj; Tomas Erban; Hiroshi Tanaka
  • Funder
  • Fondo Nacional de Financiamiento para la Ciencia, la Tecnología y la Innovación
LATEST VERSION PUBLISHED 03 Feb 2022
https://doi.org/10.12688/f1000research.75856.1
Review metrics
Food supplements to complement brain functioning: the benefits of a combination of magnesium, folic acid, omega-3 fatty acids and vitamin E
[version 1; peer review: 1 approved]
Rita Businaro
Peer Reviewers Ned D Heindel
  • Funder
  • Unconditioned grant from Angelini Pharma S.p.A., Rome, Italy (for editorial assistance)
PUBLISHED 03 Feb 2022
https://doi.org/10.12688/f1000research.72808.2
Research Article metrics
Revised
Student biocuration projects as a learning environment
[version 2; peer review: 2 approved]
Katherine E. Thurlow, Ruth C. Lovering, Sandra De Miranda Pinheiro
Peer Reviewers Nicole A. Vasilevsky; Anna Delprato
  • Funders
  • National Institute for Health Research University College London Hospitals Biomedical Research Centre
  • Alzheimer’s Research UK
LATEST VERSION PUBLISHED 02 Feb 2022
https://doi.org/10.12688/f1000research.79530.1
Software Tool Article metrics
bit: a multipurpose collection of bioinformatics tools
[version 1; peer review: 2 not approved]
Michael Lee
Peer Reviewers Kai Zhang; Georges Hattab
PUBLISHED 31 Jan 2022
https://doi.org/10.12688/f1000research.108489.1
Research Article metrics
Quantification of the effects of chimerism on read mapping, differential expression and annotation following short-read de novo assembly.
[version 1; peer review: 2 approved with reservations]
Raquel Linheiro, John Archer
Peer Reviewers Ben J. Mans; Kun Lu Lu
  • Funder
  • Fundacão para a Ciência e a Tecnologia (FCT)
PUBLISHED 31 Jan 2022
https://doi.org/10.12688/f1000research.74254.1
Brief Report metrics
DNA barcoding for the discrimination of Uncaria gambir and its closely related species using internal transcribed spacer genes
[version 1; peer review: 1 approved with reservations, 1 not approved]
Epi Supri Wardi, Sumaryati Syukur, Zulkarnain Chaidir, Jamsari Jamsari, Bastian Nova
Peer Reviewers Jarrett Phillips; Andrey Yurkov
  • Funder
  • Kementerian Riset Teknologi Dan Pendidikan Tinggi Republik Indonesia
PUBLISHED 27 Jan 2022
https://doi.org/10.12688/f1000research.74551.1
Method Article metrics
A population of in silico models identifies the interplay between Nav 1.8 conductance and potassium currents as key in regulating human dorsal root ganglion neuron excitability
[version 1; peer review: 1 approved, 3 approved with reservations]
Oliver J. Britton, Blanca Rodriguez
Peer Reviewers Dr. Gonzalo Hernandez Hernandez and Igor Vorobyov; Stewart Heitmann; Markos Xenakis; Joseph J Pancrazio
  • Funders
  • National Centre for the Replacement Refinement and Reduction of Animals in Research
  • Wellcome Trust
PUBLISHED 27 Jan 2022
https://doi.org/10.12688/f1000research.107886.1
Editorial metrics NOT PEER REVIEWED
Lessons from a ten-year-long journey: building a student-driven computational biology society across Turkey
[version 1; peer review: not peer reviewed]
Yasin Kaya, Tülay Karakulak, Cemil Can Saylan, E. Ravza Gür, Engin Tatlıdil, Sevilay Güleşen, Fatma Betül Dinçaslan, Handan Melike Dönertaş
  • Funder
  • ISCB Student Council
PUBLISHED 26 Jan 2022
https://doi.org/10.12688/f1000research.76828.1
Software Tool Article metrics
The software for interactive evaluation of mass spectrometric imaging heterogeneity
[version 1; peer review: 1 approved with reservations]
Evgeny Zhvansky, Ekaterina Zhdanova, Maxim Belenikin, Maria Shamraeva, Sergei Silkin, Konstantin Bocharov, Anatoly A. Sorokin
Peer Reviewers Jean-Nicolas Audinot
  • Funder
  • Ministry of Science and Higher Education of the Russian Federation
PUBLISHED 25 Jan 2022
https://doi.org/10.12688/f1000research.52785.2
Brief Report metrics
Revised
Global stability analysis of hepatitis B virus dynamics
[version 2; peer review: 2 approved, 1 approved with reservations]
Olajumoke Oludoun, Olukayode Adebimpe, James Ndako, Oluwakemi E. Abiodun, Babatunde Gbadamosi, Benedicta B. Aladeitan
Peer Reviewers Abimbola Abolarinwa; Ran Zhang; Syafruddin Side
LATEST VERSION PUBLISHED 21 Jan 2022
https://doi.org/10.12688/f1000research.24567.2
Case Report metrics
Revised
Case Report: Sustained mitochondrial damage in cardiomyocytes in patients with severe propofol infusion syndrome
[version 2; peer review: 2 approved]
Satoshi Karasawa, Taka-aki Nakada, Naoto Mori, Michiko Daimon, Hideyuki Miyauchi, Tetsuya Kanai, Hiroyuki Takano, Yoshio Kobayashi, Shigeto Oda
Peer Reviewers Susanne Haen and Petra Fallier-Becker; Anja Karlstaedt
LATEST VERSION PUBLISHED 20 Jan 2022
https://doi.org/10.12688/f1000research.27413.3
Research Article metrics
Revised
Narcolepsy in Parkinson's disease with insulin resistance
[version 3; peer review: 3 approved]
Alisha Chunduri, Wim E. Crusio, Anna Delprato
Peer Reviewers Makoto Hashimoto; Qing Wang; Daniel Enterría-Morales
LATEST VERSION PUBLISHED 20 Jan 2022
https://doi.org/10.12688/f1000research.53682.4
Research Article metrics
Revised
Frequency of parasitic infections in Arachishypogaea L (groundnuts), Citrulluslanatus seeds (watermelon seeds), and Ziziphusspina-christi (nabag) sold by street vendors in Khartoum State, Sudan: a cross-sectional study
[version 4; peer review: 2 approved]
Arwa Suleiman Mohammed, Ahmed Abd Alla, Ahmed Galander, Tayseer Elfaki, Ahmed Ibrahim Hashim, Hisham N. Altayb
Peer Reviewers Samar Al Nahhas; Erastus Mulinge
LATEST VERSION PUBLISHED 20 Jan 2022
https://doi.org/10.12688/f1000research.51900.2
Software Tool Article metrics
Revised
ContactJ: Characterization of lipid droplet-mitochondrial contacts using fluorescence microscopy and image analysis
[version 2; peer review: 2 approved]
Gemma Martín, Marta Bosch, Elisenda Coll, Robert G. Parton, Albert Pol, Maria Calvo
Peer Reviewers Mafalda Sousa and Maria Azevedo; Gadea Mata Martinez
  • Funder
  • European Cooperation in Science and Technology
LATEST VERSION PUBLISHED 18 Jan 2022
https://doi.org/10.12688/f1000research.52467.2
Research Article metrics
Revised
Do Maya women have the chance to improve their quality of life?
[version 2; peer review: 3 approved with reservations]
Anna Siniarska, Napoleon Wolański
Peer Reviewers Maciej Henneberg; Richard L Jantz; Elisabetta Marini
  • Funder
  • Consejo Nacional de Ciencia y Tecnología
LATEST VERSION PUBLISHED 18 Jan 2022
https://doi.org/10.12688/f1000research.52197.3
Brief Report metrics
Revised
Fractionation of Averrhoa bilimbi hexane extract corresponding to brown adipocytes stimulation
[version 3; peer review: 1 approved, 1 approved with reservations]
Mohamad Faiz Hamzah, Azimah Amanah, Wai Kwan Lau
Peer Reviewers Yusuf Andriana; Nor Akmalazura Jani
  • Funder
  • Ministry of Higher Education Malaysia
LATEST VERSION PUBLISHED 18 Jan 2022
https://doi.org/10.12688/f1000research.20504.2
Data Note metrics
Revised
Supplementary data on virus-like particles in the brainstem of Parkinson’s disease patients and controls
[version 2; peer review: 2 approved]
Robert R. Dourmashkin, Peter Locker, Sherman A. McCall, Matthew J. Hannah
Peer Reviewers Doris Bucher; Marie-Eve Tremblay
LATEST VERSION PUBLISHED 17 Jan 2022
https://doi.org/10.12688/f1000research.52026.2
Method Article metrics
Revised
A deep learning segmentation strategy that minimizes the amount of manually annotated images
[version 2; peer review: 2 approved]
Thierry Pécot, Alexander Alekseyenko, Kristin Wallace
Peer Reviewers Alice Lucas; Romain F Laine
  • Funder
  • Chan Zuckerberg Initiative
LATEST VERSION PUBLISHED 17 Jan 2022
https://doi.org/10.12688/f1000research.53365.2
Case Report metrics
Revised
Case Report: Priapism as The Clinical Presenting Feature of Chronic Myeloid Leukemia: Case Report and 20-Year Literature Review
[version 2; peer review: 2 approved]
Siprianus Ugroseno Yudho Bintoro, Pradana Zaky Romadhon, Satriyo Dwi Suryantoro, Rusdi Zakki Aminy, Choirina Windradi, Krisnina Nurul Widiyastuti
Peer Reviewers Wulyo Rajabto; Ritu Gupta
LATEST VERSION PUBLISHED 13 Jan 2022
841-860 of 4,526 ARTICLES
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