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https://doi.org/10.12688/f1000research.9667.2
Research Note metrics
Revised
RNA-seq assembler artifacts can bias expression counts and differential expression analysis - case study on the chickpea transcriptome emphasizes importance of freely accessible data for reproducibility
[version 2; peer review: 2 not approved]
Sandeep Chakraborty
Peer Reviewers Björn Voß; Lilah Toker
LATEST VERSION PUBLISHED 06 Dec 2016
https://doi.org/10.12688/f1000research.10058.1
Software Tool Article metrics
CanVar: A resource for sharing germline variation in cancer patients
[version 1; peer review: 4 approved]
Daniel Chubb, Peter Broderick, Sara E. Dobbins, Richard S. Houlston
Peer Reviewers Laura Valle and Victor Moreno; Pavel Vodička; Wolfgang Huber and Vladislav Kim; James Ware and Nicola Whiffin
  • Funders
  • Bloodwise
  • Seventh Framework Programme
  • Cancer Research UK
PUBLISHED 05 Dec 2016
https://doi.org/10.12688/f1000research.9778.1
Research Article metrics PEER REVIEW DISCONTINUED
Identification of genetic pathways driving Ebola virus disease in humans and targets for therapeutic intervention
[version 1; peer review: 1 not approved]
Daniel A. Achinko, Anton Dormer, Mahesh Narayanan, Elton F. Norman, Muneer Abbas
Peer Reviewers Priya Duggal and Cristian Valencia
PUBLISHED 02 Dec 2016
https://doi.org/10.12688/f1000research.6402.3
Research Article metrics
Revised
The developmental transcriptome of contrasting Arctic charr (Salvelinus alpinus) morphs
[version 3; peer review: 2 approved, 1 approved with reservations]
Johannes Gudbrandsson, Ehsan P. Ahi, Sigridur R. Franzdottir, Kalina H. Kapralova, Bjarni K. Kristjansson, S. Sophie Steinhaeuser, Valerie H. Maier, Isak M. Johannesson, Sigurdur S. Snorrason, Zophonias O. Jonsson, Arnar Palsson
Peer Reviewers Daniel Macqueen; Anne Dalziel; Örjan Östman
LATEST VERSION PUBLISHED 02 Dec 2016
https://doi.org/10.12688/f1000research.10103.1
Method Article metrics
A data-driven approach to estimating the number of clusters in hierarchical clustering
[version 1; peer review: 2 approved, 1 approved with reservations]
Antoine E. Zambelli
Peer Reviewers Xin Zou; Alok Sharma; Dylan M. Owen
PUBLISHED 01 Dec 2016
https://doi.org/10.12688/f1000research.6139.3
Software Tool Article metrics
Revised
MetaGenSense: A web-application for analysis and exploration of high throughput sequencing metagenomic data
[version 3; peer review: 1 approved, 2 approved with reservations]
Damien Correia, Olivia Doppelt-Azeroual, Jean-Baptiste Denis, Mathias Vandenbogaert, Valérie Caro
Peer Reviewers Peter Li; Manuel Corpas and Benedikt Rauscher; Saskia Hiltemann
LATEST VERSION PUBLISHED 01 Dec 2016
https://doi.org/10.12688/f1000research.9629.1
Review metrics
Mitochondrial apoptosis and BH3 mimetics
[version 1; peer review: 3 approved]
Haiming Dai, X. Wei Meng, Scott H. Kaufmann
Peer Reviewers Sharad Kumar; Alan Richardson; Kapil Bhalla
PUBLISHED 01 Dec 2016
https://doi.org/10.12688/f1000research.9679.1
Review metrics
Hyphal ontogeny in Neurospora crassa: a model organism for all seasons
[version 1; peer review: 3 approved]
Meritxell Riquelme, Leonora Martínez-Núñez
Peer Reviewers Brian Shaw and Zachary Schultzhaus; N. Louise Glass; Steven Harris
PUBLISHED 30 Nov 2016
https://doi.org/10.12688/f1000research.9503.1
Review metrics
Genetic factors influencing risk to orofacial clefts: today’s challenges and tomorrow’s opportunities
[version 1; peer review: 2 approved]
Terri H. Beaty, Mary L. Marazita, Elizabeth J. Leslie
Peer Reviewers Charlotte Hobbs; Jacqueline Hecht
PUBLISHED 30 Nov 2016
https://doi.org/10.12688/f1000research.9272.1
Review metrics
Understanding nontuberculous mycobacterial lung disease: it’s been a long time coming
[version 1; peer review: 4 approved]
David E. Griffith, Timothy R. Aksamit
Peer Reviewers Won-Jung Koh; Anne O'Donnell; Jeffrey Glassroth; Adrian M. Zelazny
PUBLISHED 30 Nov 2016
https://doi.org/10.12688/f1000research.9534.1
Review metrics
Recent advances in understanding Streptomyces
[version 1; peer review: 4 approved]
Keith F. Chater
Peer Reviewers Rosemary Loria; Klas Flardh; Paul J Dyson; Wolfgang Wohlleben
PUBLISHED 30 Nov 2016
https://doi.org/10.12688/f1000research.9932.1
Research Article metrics
Mutations of the CHEK2 gene in patients with cancer and their presence in the Latin American population
[version 1; peer review: 3 approved with reservations]
Sandra Guauque-Olarte, Ana-Lucia Rivera-Herrera, Laura Cifuentes-C
Peer Reviewers Claire Palles; Muhammad Usman Rashid; Ewa Grzybowska
PUBLISHED 29 Nov 2016
https://doi.org/10.12688/f1000research.8040.2
Review metrics
Revised
From simple to supercomplex: mitochondrial genomes of euglenozoan protists
[version 2; peer review: 2 approved]
Drahomíra Faktorová, Eva Dobáková, Priscila Peña-Diaz, Julius Lukeš
Peer Reviewers Thomas Becker; Daniel Sloan
LATEST VERSION PUBLISHED 29 Nov 2016
https://doi.org/10.12688/f1000research.9619.1
Review metrics
Recent advances in the medical treatment of breast cancer
[version 1; peer review: 2 approved]
Daniel A. Vorobiof
Peer Reviewers István Láng; Stephen R Johnston
PUBLISHED 29 Nov 2016
https://doi.org/10.12688/f1000research.9705.1
Review metrics
Bacteriophage-based tools: recent advances and novel applications
[version 1; peer review: 3 approved]
Lisa O'Sullivan, Colin Buttimer, Olivia McAuliffe, Declan Bolton, Aidan Coffey
Peer Reviewers Rob Lavigne; Sam R Nugen; Laurent Debarbieux
PUBLISHED 29 Nov 2016
https://doi.org/10.12688/f1000research.9107.1
Review metrics
Plant adaptation to cold climates
[version 1; peer review: 2 approved]
Christian Körner
Peer Reviewers Rowan Sage; Renu Deswal
PUBLISHED 25 Nov 2016
https://doi.org/10.12688/f1000research.9465.1
Review metrics
Advances in the management of osteosarcoma
[version 1; peer review: 2 approved]
Stefan S. Bielack, Stefanie Hecker-Nolting, Claudia Blattmann, Leo Kager
Peer Reviewers Shreyaskumar Patel; Bruno Fuchs
PUBLISHED 25 Nov 2016
https://doi.org/10.12688/f1000research.10255.1
Research Note metrics
Divergent pattern of genomic variation in Plasmodium falciparum and P. vivax
[version 1; peer review: 2 approved with reservations]
Preeti Goel, Gajinder Pal Singh
Peer Reviewers Richard D. Pearson; Charles J. Woodrow and Ipsita Sinha
  • Funders
  • University Grants Commission of India
  • Wellcome Trust/DBT India Alliance
PUBLISHED 25 Nov 2016
https://doi.org/10.12688/f1000research.9375.1
Review metrics
Recent advances in understanding & managing male infertility
[version 1; peer review: 5 approved]
Jared M. Bieniek, Kirk C. Lo
Peer Reviewers Andrea Garolla; Cigdem Tanrikut; Gerhard Haidl; Maciej Kurpisz; Rajender Singh
PUBLISHED 24 Nov 2016
https://doi.org/10.12688/f1000research.9621.1
Review metrics
Recent advances in understanding neuropathic pain: glia, sex differences, and epigenetics
[version 1; peer review: 2 approved]
Halina Machelska, Melih Ö. Celik
Peer Reviewers Venetia Zachariou; Makoto Tsuda
PUBLISHED 22 Nov 2016
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