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https://doi.org/10.12688/f1000research.55301.2
Research Article metrics
Revised
A whole genome atlas of 81 Psilocybe genomes as a resource for psilocybin production.
[version 2; peer review: 1 approved with reservations, 1 not approved]
Kevin McKernan, Liam Kane, Yvonne Helbert, Lei Zhang, Nathan Houde, Stephen McLaughlin
Peer Reviewers Bryn T M Dentinger and Alexander Bradshaw; Sebastiaan Werten
LATEST VERSION PUBLISHED 17 Dec 2021
https://doi.org/10.12688/f1000research.73568.1
Research Article metrics AWAITING PEER REVIEW
May Mutation of SNP rs1800947 Affects Length of Stay Outcome of COVID-19 suspects?
[version 1; peer review: awaiting peer review]
Zulmansyah Zulmansyah, Gaga Irawan Nugraha, Dwi Agustian, Dida Akhmad Gurnida
Peer Reviewers Invited
PUBLISHED 14 Dec 2021
https://doi.org/10.12688/f1000research.73895.1
Systematic Review metrics
Population variation in Y-chromosome microdeletion and its role in the evaluation of male infertility management: a systematic review
[version 1; peer review: 1 approved, 2 not approved]
Ponco Birowo, Isaac Ardianson Deswanto, Widi Atmoko, Nur Rasyid
Peer Reviewers Doddy Moesbadianto Soebadi; Yankai Xia; Özlem Okutman
  • Funder
  • PUTI 2020
PUBLISHED 06 Dec 2021
https://doi.org/10.12688/f1000research.53821.2
Software Tool Article metrics
Revised
snpQT: flexible, reproducible, and comprehensive quality control and imputation of genomic data
[version 2; peer review: 2 approved, 1 approved with reservations]
Christina Vasilopoulou, Benjamin Wingfield, Andrew P. Morris, William Duddy
Peer Reviewers Andries T. Marees; Stephanie M. Gogarten; Anna Ulrich
  • Funders
  • Northern Ireland Public Health Agency (HSC R&D)
  • EU Regional Development Fund (ERDF) EU Sustainable Competitiveness Programme for Northern Ireland
LATEST VERSION PUBLISHED 29 Nov 2021
https://doi.org/10.12688/f1000research.52889.2
Research Article metrics
Revised
Boesenbergia pandurata application in Goldfish (Cyprinus carpio) Feed to Enhancing Fish Growth, Immunity System, and Resistance to Bacterial Infection
[version 2; peer review: 2 approved]
Esti Handayani Hardi, Gina Saptiani, Rudi Agung Nugroho, fadlul Rahman, Sulistyawati Sulistyawati, Widyaningsih Rahayu, Ali Supriansyah, Irawan Wijaya Kusuma
Peer Reviewers Angela Mariana Lusiastuti; A. Abinawanto
  • Funder
  • LPDP Fiscal Year 2019- 2021
LATEST VERSION PUBLISHED 26 Nov 2021
https://doi.org/10.12688/f1000research.74524.1
Brief Report metrics
An Atlas of Plant Transposable Elements
[version 1; peer review: 2 approved]
Daniel Longhi Fernandes Pedro, Tharcisio Soares Amorim, Alessandro Varani, Romain Guyot, Douglas Silva Domingues, Alexandre Rossi Paschoal
Peer Reviewers Gökhan Karakülah; Adriana Ludwig
  • Funders
  • Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - Brasil (CAPES)
  • Conselho Nacional de Desenvolvimento Científico e Tecnológico
  • NAPI de Bioinformática - Fundação Araucária
  • NVIDIA from the GPU Grant Program 2019 - Accelerated Data Science Call for the GPU Seed Units: Titan V device
  • PROPPG - UTFPR
PUBLISHED 24 Nov 2021
https://doi.org/10.12688/f1000research.74727.1
Data Note metrics
Ribo-Seq and RNA-Seq of TMA46 (DFRP1) and GIR2 (DFRP2) knockout yeast strains
[version 1; peer review: 3 approved]
Artyom A. Egorov, Desislava S. Makeeva, Nadezhda E. Makarova, Dmitri A. Bykov, Yanislav S. Hrytseniuk, Olga V. Mitkevich, Valery N. Urakov, Alexander I. Alexandrov, Ivan V. Kulakovskiy, Sergey E. Dmitriev
Peer Reviewers Anton A. Komar; Olivier Namy; Nikolay E. Shirokikh and Katrina Woodward
  • Funders
  • Ministry of Science and Higher Education of the Russian Federation
  • Russian Foundation for Basic Research
  • Russian Science Foundation
PUBLISHED 16 Nov 2021
https://doi.org/10.12688/f1000research.53221.3
Research Article metrics
Revised
Molecular Epidemiological Surveillance of CTX-M-15-producing Klebsiella pneumoniae from the patients of a teaching hospital in Sindh, Pakistan.
[version 3; peer review: 3 approved]
Muzaheed Muzaheed, Naveed Sattar Shaikh, Saeed Sattar Shaikh, Sadananda Acharya, Shajiya Sarwar Moosa, Mohammad Habeeb Shaikh, Faisal M. Alzahrani, Amer Ibrahim Alomar
Peer Reviewers SUPRIT DESHPANDE; Abbas Farahani; Mubashir Zafar
LATEST VERSION PUBLISHED 15 Nov 2021
https://doi.org/10.12688/f1000research.54533.2
Software Tool Article metrics
Revised
RNfuzzyApp: an R shiny RNA-seq data analysis app for visualisation, differential expression analysis, time-series clustering and enrichment analysis
[version 2; peer review: 3 approved]
Margaux Haering, Bianca H Habermann
Peer Reviewers Oliver Hahn; Rhonda Bacher; Anita Grigoriadis
  • Funder
  • Agence Nationale de la Recherche
LATEST VERSION PUBLISHED 12 Nov 2021
https://doi.org/10.12688/f1000research.73641.1
Software Tool Article metrics
PlotXpress, a webtool for normalization and visualization of reporter expression data
[version 1; peer review: 3 approved]
Elias Brandorff, Marc Galland, Joachim Goedhart
Peer Reviewers Lorena Pantano Rubino; Guillaume Jacquemet; Vincent J. Lynch
PUBLISHED 08 Nov 2021
https://doi.org/10.12688/f1000research.74169.1
Genome Note metrics
Isolation and sequencing of three RB49-like bacteriophages infecting O antigen-producing E. coli strains
[version 1; peer review: 1 approved, 1 approved with reservations]
Alexander Efimov, Eugene Kulikov, Alla Golomidova, Ilya Belalov, Vladislav Babenko, Andrey Letarov
Peer Reviewers Marcin Los; Mikael Skurnik
  • Funder
  • Ministry of Science and Higher Education of the Russian Federation, WCSC
PUBLISHED 03 Nov 2021
https://doi.org/10.12688/f1000research.53643.2
Research Article metrics
Revised
Correlation between CD44+ cancer stem cell expression and histopathological types of nasopharyngeal carcinoma
[version 2; peer review: 2 approved]
Muhtarum Yusuf, Indriyadevi Indra, Sri Herawati Juniati, Yussy Afriani Dewi
Peer Reviewers Farhat Farhat; Mohd Razif Mohamad Yunus
LATEST VERSION PUBLISHED 03 Nov 2021
https://doi.org/10.12688/f1000research.53926.2
Software Tool Article metrics
Revised
PEGS: An efficient tool for gene set enrichment within defined sets of genomic intervals
[version 2; peer review: 2 approved]
Peter Briggs, A. Louise Hunter, Shen-hsi Yang, Andrew D. Sharrocks, Mudassar Iqbal
Peer Reviewers Nicolae Radu Zabet; Aziz Khan
  • Funders
  • Medical Research Council (MRC)
  • Wellcome Trust
LATEST VERSION PUBLISHED 02 Nov 2021
https://doi.org/10.12688/f1000research.27096.2
Research Article metrics
Revised
Common genetic signatures of Alzheimer’s disease in Down Syndrome
[version 2; peer review: 2 approved, 2 approved with reservations]
Ayati Sharma, Alisha Chunduri, Asha Gopu, Christine Shatrowsky, Wim E. Crusio, Anna Delprato
Peer Reviewers Daniel W. Nixon; William C. Mobley; Ann-Charlotte Granholm; Joseph H. Lee and Nicole Schupf
LATEST VERSION PUBLISHED 25 Oct 2021
https://doi.org/10.12688/f1000research.22039.3
Opinion Article metrics
Revised
Intrinsic negative feedback as a limiting factor for the evolution of higher forms of intelligence
[version 3; peer review: 2 approved]
Stefan T. Arold
Peer Reviewers Rafael Bretas Vieira and Atsushi Iriki; Robert J Sternberg
  • Funder
  • King Abdullah University of Science and Technology
LATEST VERSION PUBLISHED 19 Oct 2021
https://doi.org/10.12688/f1000research.73724.1
Research Article metrics
Detection of CYP2C19*2_ allele among Helicobacter pylori -infected patients in two tertiary hospitals of Khartoum, Sudan, 2019
[version 1; peer review: 1 approved, 1 approved with reservations]
Azza Abbas, Sawazen Malik, Bushra Sulieman, Khalid Enan
Peer Reviewers Mitsushige Sugimoto; Marek Mirowski
PUBLISHED 18 Oct 2021
https://doi.org/10.12688/f1000research.54139.2
Case Report metrics
Revised
Case Report: severe hemoperitoneum due to spontaneous rupture of uterine vessels during the second trimester of pregnancy
[version 2; peer review: 1 approved, 1 approved with reservations]
G.K.C. Jayalath, Ramya Pathiraja, G.V. Ishara Geelaka Bandara Jayarathna
Peer Reviewers Augustus Keshala Prabhodana Ranaweera; Phuc Nhon Nguyen
LATEST VERSION PUBLISHED 18 Oct 2021
https://doi.org/10.12688/f1000research.73094.1
Study Protocol metrics
Efficacy of mesenchymal stromal cells in preclinical models of necrotizing enterocolitis: a systematic review protocol
[version 1; peer review: 2 approved with reservations]
Camille Maltais-Bilodeau, Ewa Henckel, Kelly D. Cobey, Nadera Ahmadzai, Becky Skidmore, Emanuela Ferretti, Bernard Thébaud
Peer Reviewers William W. Hay Jr; Pekka Maattanen
PUBLISHED 05 Oct 2021
https://doi.org/10.12688/f1000research.46399.2
Research Article metrics
Revised
Polymorphisms of the genes ABCG2, SLC22A12 and XDH and their relation with hyperuricemia and hypercholesterolemia in Mexican young adults
[version 2; peer review: 2 approved]
Juan Manuel Vargas-Morales, Martha Guevara-Cruz, Celia Aradillas-García, Lilia G. Noriega, Armando Tovar, Jorge Alejandro Alegría-Torres
Peer Reviewers Ilham Akbar Rahman; Jing He
  • Funder
  • Universidad Autónoma de San Luis Potosí
LATEST VERSION PUBLISHED 24 Sep 2021
https://doi.org/10.12688/f1000research.53287.1
Software Tool Article metrics
SureTypeSCR: R package for rapid quality control and genotyping of SNP arrays from single cells
[version 1; peer review: 1 approved, 2 approved with reservations]
Ivan Vogel, Lishan Cai, Lea Jerman-Plesec, Eva R. Hoffmann
Peer Reviewers Joris Robert Vermeesch; Jason Torres; Kun Lu Lu
  • Funders
  • Danmarks Grundforskningsfond
  • European Research Council
  • Novo Nordisk Fonden
PUBLISHED 21 Sep 2021
181-200 of 2,038 ARTICLES
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