All Research Articles

Home Browse Articles
21-40 of 630 ARTICLES
Previous Next
 in 
https://doi.org/10.12688/f1000research.157875.2
Study Protocol metrics
Revised
Identifying and Assessing Physiological Biomarkers for Food and Energy Intake: A Systematic Review with Meta-Analysis Protocol
[version 2; peer review: 1 approved with reservations]
Jiaying Zhou, Mayue Shi, Mingzhu Cai
Peer Reviewers Faiza Jan Iftikhar
  • Funder
  • Dame Julia Higgins Postdoc Collaborative Research Fund
LATEST VERSION PUBLISHED 03 Apr 2025
https://doi.org/10.12688/f1000research.160063.2
Software Tool Article metrics
Revised
mimicINT: A workflow for microbe-host protein interaction inference
[version 2; peer review: 2 approved, 1 approved with reservations]
Sébastien A. Choteau, Kevin Maldonado, Aurélie Bergon, Marceau Cristianini, Mégane Boujeant, Lilian Drets, Christine Brun, Lionel Spinelli, Andreas Zanzoni
Peer Reviewers Ylva Ivarsson; Sobia Idrees; Leandro Simonetti
  • Funders
  • Excellence Initiative of Aix-Marseille University - A*MIDEX
  • Agence Nationale de la Recherche
  • Fondation pour la Recherche Médicale
  • European Union’s Horizon 2020 Research and Innovation Programme
LATEST VERSION PUBLISHED 28 Mar 2025
https://doi.org/10.12688/f1000research.162719.1
Software Tool Article metrics
The EpiFusion Analysis Framework for joint phylodynamic and epidemiological analysis of outbreak characteristics
[version 1; peer review: 2 approved, 1 approved with reservations]
Ciara Judge, Oliver Brady, Sarah Hill
Peer Reviewers Vijaykrishna Dhanasekaran and Ruopeng Xie; Claire Guinat; Leo A Featherstone
  • Funders
  • National Universities of Ireland Denis Phelan Scholarship
  • Medical Research Council
  • Wellcome Trust
  • Bloomsbury Colleges PhD Studentship
PUBLISHED 28 Mar 2025
https://doi.org/10.12688/f1000research.161076.1
Software Tool Article metrics
ShinyCellPlus: an improved ShinyCell application for the interactive visualization of single cell dat
[version 1; peer review: 2 approved with reservations]
Drew Moore, Bryan Granger, Stefano Berto
Peer Reviewers Valdemaras Petrošius; Pierre-Luc Germain
  • Funder
  • National Institute of General Medical Sciences
PUBLISHED 27 Mar 2025
https://doi.org/10.12688/f1000research.150975.3
Research Article metrics
Revised
Analyzing Molecular Traits of H9N2 Avian Influenza Virus Isolated from a Same Poultry Farm in West Java Province, Indonesia, in 2017 and 2023
[version 3; peer review: 1 approved, 2 approved with reservations]
Muhammad Ade Putra, Amin Soebandrio, I Wayan Teguh Wibawan, Christian Marco Hadi Nugroho Nugroho, Ryan Septa Kurnia, Otto Sahat Martua Silaen, Rifky Rizkiantino, Agustin Indrawati, Okti Nadia Poetri, Desak Gede Budi Krisnamurti
Peer Reviewers Amany Adel; Mark Zanin and Hui Lei; Albert Perlas
  • Funder
  • Universitas Indonesia, PUTI Grant
LATEST VERSION PUBLISHED 05 Mar 2025
https://doi.org/10.12688/f1000research.76068.5
Research Article metrics
Revised
Cicada minimum age tree: Cryptic speciation and exponentially increasing base substitution rates in recent geologic time
[version 5; peer review: 2 approved, 2 approved with reservations, 1 not approved]
Soichi Osozawa, John Wakabayashi
Peer Reviewers Sungsik Kong; David A Duchêne; Fan Song; Jacek Szwedo; Christopher H Dietrich
  • Funder
  • Japan Society for the Promotion of Science
LATEST VERSION PUBLISHED 14 Feb 2025
https://doi.org/10.12688/f1000research.127142.3
Software Tool Article metrics
Revised
Med-ImageTools: An open-source Python package for robust data processing pipelines and curating medical imaging data
[version 3; peer review: 2 approved]
Sejin Kim, Michal Kazmierski, Kevin Qu, Jacob Peoples, Minoru Nakano, Vishwesh Ramanathan, Joseph Marsilla, Mattea Welch, Amber Simpson, Benjamin Haibe-Kains
Peer Reviewers Rachel Sparks; Johann Faouzi
  • Funders
  • Canadian Cancer Society
  • Canadian Institutes of Health Research
LATEST VERSION PUBLISHED 07 Feb 2025
https://doi.org/10.12688/f1000research.157851.2
Genome Note metrics
Revised
A reference genome for the eastern bettong (Bettongia gaimardi)
[version 2; peer review: 3 approved]
Luke W Silver, Richard J Edwards, Linda Neaves, Adrian D. Manning, Carolyn J Hogg, Sam Banks
Peer Reviewers Naoki Osada; Jonathan J Hughes; Németh Attila
  • Funder
  • Australian Research Council
LATEST VERSION PUBLISHED 27 Jan 2025
https://doi.org/10.12688/f1000research.156295.1
Software Tool Article metrics
Facilitating bootstrapped and rarefaction-based microbiome diversity analysis with q2-boots
[version 1; peer review: 1 approved, 2 approved with reservations]
Isaiah Raspet, Elizabeth Gehret, Chloe Herman, Jeff Meilander, Andrew Manley, Anthony Simard, Evan Bolyen, J Gregory Caporaso
Peer Reviewers Digvijay Verma; Vitor Heidrich; Luke R Thompson
  • Funder
  • National Institutes of Health
PUBLISHED 15 Jan 2025
https://doi.org/10.12688/f1000research.146862.3
Research Article metrics
Revised
Molecular docking and dynamics studies to identify novel active compounds targeting potential breast cancer receptor proteins from an indigenous herb Euphorbia thymifolia Linn
[version 3; peer review: 2 approved]
Vasavi Kumblekar, Reshma Kumarchandra, K Sreedhara Ranganath Pai, ShamaPrasada K, Suman Manandhar, Rajeshwari Shastry, Sharada Rai
Peer Reviewers Renukaradhya Math; Subhash Chandra
LATEST VERSION PUBLISHED 09 Dec 2024
https://doi.org/10.12688/f1000research.146350.2
Research Article metrics
Revised
Study anti-viral drugs for their efficiency against multiple SARS CoV-2 drug targets within molecular docking, molecular quantum similarity, and chemical reactivity indices frameworks
[version 2; peer review: 1 approved, 2 approved with reservations, 2 not approved]
Alejandro Morales-Bayuelo, Jesús Sánchez-Márquez, Ricardo Vivas-Reyes, Savaş Kaya
Peer Reviewers Sajjan Rajpoot; Sobia Ahsan Halim; Mohnad Abdalla; Taufik Muhammad Fakih; Estari Mamidaal
  • Funder
  • Unisinu 2024
LATEST VERSION PUBLISHED 06 Dec 2024
https://doi.org/10.12688/f1000research.157679.1
Research Article metrics
Feather keratin in Pavo cristatus: A tentative structure
[version 1; peer review: 1 approved]
Peter Russ, Helmut O.K. Kirchner, Herwig Peterlik, Ingrid M. Weiss
Peer Reviewers Boaz Pokroy
  • Funders
  • Carl-Zeiss-Stiftung
  • Universität Stuttgart
PUBLISHED 07 Nov 2024
https://doi.org/10.12688/f1000research.154860.1
Research Article metrics AWAITING PEER REVIEW
Mapping bread wheat trait ontologies for semantic interoperability
[version 1; peer review: awaiting peer review]
Claire Nédellec, Sophie Aubin, Clara Sauvion, Liliana Ibanescu, Sonia Bravo, Jacques Le Gouis, Thierry C. Marcel, Cyril Pommier, Robert Bossy, Michael Alaux
Peer Reviewers Invited
  • Funder
  • Agence Nationale de la Recherche
PUBLISHED 27 Sep 2024
https://doi.org/10.12688/f1000research.156426.1
Editorial metrics NOT PEER REVIEWED
25 Years of BOSC, the Bioinformatics Open Source Conference
[version 1; peer review: not peer reviewed]
Nomi L. Harris, Karsten Hokamp, Jessica Maia, Hervé Ménager, Monica C. Munoz-Torres, Swapnil Sawant, Deepak Unni, Jason Williams
  • Funders
  • National Science Foundation (JW)
  • Director, Office of Science, Office of Basic Energy Sciences, of the U.S. Department of Energy (NLH)
PUBLISHED 27 Sep 2024
https://doi.org/10.12688/f1000research.140344.2
Research Article metrics
Revised
NCBench: providing an open, reproducible, transparent, adaptable, and continuous benchmark approach for DNA-sequencing-based variant calling
[version 2; peer review: 2 approved]
Friederike Hanssen, Gisela Gabernet, Famke Bäuerle, Bianca Stöcker, Felix Wiegand, Nicholas H. Smith, Christian Mertes, Avirup Guha Neogi, Leon Brandhoff, Anna Ossowski, Janine Altmueller, Kerstin Becker, Andreas Petzold, Marc Sturm, Tyll Stöcker, Sugirthan Sivalingam, Fabian Brand, Axel Schmidt, Andreas Buness, Alexander J. Probst, Susanne Motameny, Johannes Köster
Peer Reviewers Justin M. Zook; Kez Cleal
  • Funders
  • German Federal Ministry for Education and Research
  • Deutsche Forschungsgemeinschaft
LATEST VERSION PUBLISHED 12 Sep 2024
https://doi.org/10.12688/f1000research.153895.1
Opinion Article metrics
From the establishment of a national bioinformatics society to the development of a national bioinformatics infrastructure
[version 1; peer review: 3 approved with reservations]
Bogdan Mirăuță, Cătălina Zenoaga-Barbăroșie, Monica Abrudan, Marius Mihășan, Mădălina Giurgiu, Daria Mihalachi, Michalis-Daniel Lazăr, RSBI Members, Horia L. Banciu
Peer Reviewers Francis Ouellette; Federico Zambelli; Carol Goble
  • Funder
  • EEA Grants/Norway Grants (Bioinformatics Capacity Building Human Genomics, an RSBI and ELIXIR Norway bilateral project)
PUBLISHED 03 Sep 2024
https://doi.org/10.12688/f1000research.131134.2
Research Article metrics
Revised
Improving genomic prediction of rhizomania resistance in sugar beet (Beta vulgaris L.) by implementing epistatic effects and feature selection
[version 2; peer review: 1 approved with reservations, 3 not approved]
Thomas Martin Lange, Felix Heinrich, Friedrich Kopisch-Obuch, Harald Keunecke, Mehmet Gültas, Armin O. Schmitt
Peer Reviewers J Mitchell McGrath; Muhammad Massub Tehseen; Daniela Holtgräwe; Chenggen Chu
LATEST VERSION PUBLISHED 28 Aug 2024
https://doi.org/10.12688/f1000research.151409.1
Research Article metrics
Design, molecular docking, synthesis and in vitro evaluation of anti-influenza activity of oseltamivir carboxamides and their hybrid molecules with hydroxamic acid
[version 1; peer review: 1 approved]
Sumia Samer Tayah, Shakir Mahmood Alwan
Peer Reviewers Hasanain Odhar
PUBLISHED 20 Aug 2024
https://doi.org/10.12688/f1000research.153905.1
Software Tool Article metrics
MirtronStructDB: A Comprehensive Database of Mirtrons with Predicted Secondary Structures
[version 1; peer review: 2 approved with reservations]
Shumin Li, Franklin Wang-Ngai Chow, Lei Chen, Junhao Su, Syed Shakeel Ahmed, Ruibang Luo
Peer Reviewers Panos Kakoulidis; Lachlan Coin
  • Funders
  • The University of Hong Kong
  • Hong Kong Research Grants Council
  • Shenzhen Municipal Government General Program
PUBLISHED 06 Aug 2024
https://doi.org/10.12688/f1000research.138294.2
Systematic Review metrics
Revised
An Assessment of Contemporary Methods and Data-Enabled Approaches for Early Cataract Detection
[version 2; peer review: 1 approved with reservations]
Chris Muchibwa, Muawya H. Sarnoub Eldaw, Mu Mu, Michael Opoku Agyeman
Peer Reviewers Abdullah Alamoodi
LATEST VERSION PUBLISHED 02 Aug 2024
21-40 of 630 ARTICLES
Previous Next
PUBLISH YOUR RESEARCH
Articles
We publish a wide range of article types in science, engineering, medicine, social sciences and humanities, with no editorial biases.
SUBMIT AN ARTICLE
See guidelines and policies.
Sign In
If you've forgotten your password, please enter your email address below and we'll send you instructions on how to reset your password.

The email address should be the one you originally registered with F1000.
Email address not valid, please try again

You registered with F1000 via Google, so we cannot reset your password.

To sign in, please click here.

If you still need help with your Google account password, please click here.

You registered with F1000 via Facebook, so we cannot reset your password.

To sign in, please click here.

If you still need help with your Facebook account password, please click here.

Code not correct, please try again
Email us for further assistance.
Server error, please try again.