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https://doi.org/10.12688/f1000research.11404.1
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Marine archaea and archaeal viruses under global change
[version 1; peer review: 2 approved]
Roberto Danovaro, Eugenio Rastelli, Cinzia Corinaldesi, Michael Tangherlini, Antonio Dell'Anno
Peer Reviewers Stéphan Jacquet; Jed A. Fuhrman
  • Funders
  • Project MERCES (Marine Ecosystem Restoration in Changing European Seas; European Union’s Horizon 2020 research and innovation program
  • Project EXPLODIVE
  • EU Project MIDAS (Managing Impacts of Deep-seA resource exploitation)
PUBLISHED 27 Jul 2017
https://doi.org/10.12688/f1000research.11279.1
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Unraveling Neisseria meningitidis pathogenesis: from functional genomics to experimental models
[version 1; peer review: 2 approved]
Marco Soriani
Peer Reviewers Martin Maiden and Odile Harrison; Muhamed-Kheir Taha
PUBLISHED 26 Jul 2017
https://doi.org/10.12688/f1000research.11543.1
Review metrics
Co-evolution techniques are reshaping the way we do structural bioinformatics
[version 1; peer review: 2 approved]
Saulo de Oliveira, Charlotte Deane
Peer Reviewers David Baker; Johannes Söding
  • Funder
  • Engineering and Physical Sciences Research Council
PUBLISHED 25 Jul 2017
https://doi.org/10.12688/f1000research.10903.1
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Senescence in the aging process
[version 1; peer review: 3 approved]
Richard GA Faragher, Anne McArdle, Alison Willows, Elizabeth L. Ostler
Peer Reviewers Thomas von Zglinicki; Parmjit Jat; Jan M. van Deursen
PUBLISHED 25 Jul 2017
https://doi.org/10.12688/f1000research.10713.1
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The potential role of microbiota for controlling the spread of extended-spectrum beta-lactamase-producing Enterobacteriaceae (ESBL-PE) in neonatal population
[version 1; peer review: 2 approved]
Thibaud Delerue, Loic de Pontual, Etienne Carbonnelle, Jean-Ralph Zahar
Peer Reviewers Gyula Tálosi; Colum P Dunne
PUBLISHED 25 Jul 2017
https://doi.org/10.12688/f1000research.11690.1
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Up-and-down immunity of pregnancy in humans
[version 1; peer review: 2 approved]
Philippe Le Bouteiller, Armand Bensussan
Peer Reviewers Judith N Bulmer; Ana Claudia Zenclussen
PUBLISHED 25 Jul 2017
https://doi.org/10.12688/f1000research.12126.1
Research Article metrics
In vitro regulation of reactive oxygen species formation in red blood cells of homozygous sickle cell patients using Vitamin C
[version 1; peer review: 2 approved with reservations]
Ogechukwu Egini, Edouard Guillaume, Titilope Adeyemo, Chiemeziem Nwanyanwu, Fnu Shweta, Eric Jaffe
Peer Reviewers Eitan Fibach; Edeghonghon Olayemi
PUBLISHED 25 Jul 2017
https://doi.org/10.12688/f1000research.11375.1
Review metrics
Glucocorticoid receptor action in metabolic and neuronal function
[version 1; peer review: 3 approved]
Michael J. Garabedian, Charles A. Harris, Freddy Jeanneteau
Peer Reviewers John A Cidlowski; Donald B DeFranco; Inez Rogatsky
PUBLISHED 24 Jul 2017
https://doi.org/10.12688/f1000research.11549.1
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Recent advances in molecular pathology of craniopharyngioma
[version 1; peer review: 2 approved]
Sarah Larkin, Niki Karavitaki
Peer Reviewers Hermann Müller; Juan Pedro Martinez-Barbera
PUBLISHED 24 Jul 2017
https://doi.org/10.12688/f1000research.12122.1
Method Article metrics
Bioconductor workflow for single-cell RNA sequencing: Normalization, dimensionality reduction, clustering, and lineage inference
[version 1; peer review: 1 approved, 2 approved with reservations]
Fanny Perraudeau, Davide Risso, Kelly Street, Elizabeth Purdom, Sandrine Dudoit
Peer Reviewers Stephanie C. Hicks; Andrew McDavid; Michael I. Love
  • Funders
  • National Institutes of Health
  • National Human Genome Research Institute
PUBLISHED 21 Jul 2017
https://doi.org/10.12688/f1000research.11385.1
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Recent advances in the prevention of preterm birth
[version 1; peer review: 2 approved]
Jeff A Keelan, John P Newnham
Peer Reviewers Martijn A Oudijk; Louis Muglia
PUBLISHED 18 Jul 2017
https://doi.org/10.12688/f1000research.11861.1
Software Tool Article metrics
YODEL: Peak calling software for HITS-CLIP data
[version 1; peer review: 2 approved with reservations]
Lance E. Palmer, Mitchell J. Weiss, Vikram R. Paralkar
Peer Reviewers Michele Trabucchi and Silvia Bottini; Neelanjan Mukherjee
  • Funders
  • National Institute of Diabetes and Digestive and Kidney Diseases
  • American Lebanese Syrian Associated Charities
  • Cancer Center Support
PUBLISHED 18 Jul 2017
https://doi.org/10.12688/f1000research.11363.1
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Recent advances in understanding Listeria monocytogenes infection: the importance of subcellular and physiological context
[version 1; peer review: 3 approved]
Daryl J. V. David, Pascale Cossart
Peer Reviewers Jörgen Johansson; Anat A. Herskovits; Sarah D'Orazio
  • Funders
  • European Commission/Marie Curie Actions
  • EMBO Long Term Fellowship
PUBLISHED 13 Jul 2017
https://doi.org/10.12688/f1000research.9259.2
Software Tool Article metrics
Revised
GeneBreak: detection of recurrent DNA copy number aberration-associated chromosomal breakpoints within genes
[version 2; peer review: 2 approved]
Evert van den Broek, Stef van Lieshout, Christian Rausch, Bauke Ylstra, Mark A. van de Wiel, Gerrit A. Meijer, Remond J.A. Fijneman, Sanne Abeln
Peer Reviewers Tobias Marschall; Angel Rubio
LATEST VERSION PUBLISHED 06 Jul 2017
https://doi.org/10.12688/f1000research.11859.2
Data Note metrics
Revised
Draft genome sequencing of the sugarcane hybrid SP80-3280
[version 2; peer review: 2 approved]
Diego Mauricio Riaño-Pachón, Lucia Mattiello
Peer Reviewers Jason Miller; Chakravarthi Mohan
  • Funders
  • Centro Nacional de Processamento de Alto Desempenho em São Paulo
  • Brazilian Bioethanol Science and Technology Laboratory
  • Fundação de Amparo à Pesquisa do Estado de São Paulo
LATEST VERSION PUBLISHED 03 Jul 2017
https://doi.org/10.12688/f1000research.11168.2
Software Tool Article metrics
Revised
TIDDIT, an efficient and comprehensive structural variant caller for massive parallel sequencing data
[version 2; peer review: 2 approved]
Jesper Eisfeldt, Francesco Vezzi, Pall Olason, Daniel Nilsson, Anna Lindstrand
Peer Reviewers Giuseppe Narzisi and Wayne Clarke; Bud Mishra
  • Funders
  • Marianne and Marcus Wallenberg Foundation
  • Vetenskapsrådet
  • Erik Rönnberg Foundation
  • Nilsson Ehle Donations
  • Svenska Sällskapet för Medicinsk Forskning
  • Hjärnfonden
  • Harald and Greta Jeanssons Foundation
  • Stockholms Läns Landsting
LATEST VERSION PUBLISHED 30 Jun 2017
https://doi.org/10.12688/f1000research.10986.1
Review metrics
Microbial metal resistance and metabolism across dynamic landscapes: high-throughput environmental microbiology
[version 1; peer review: 2 approved]
Hans Carlson, Adam Deutschbauer, John Coates
Peer Reviewers Bin Cao; David Emerson
  • Funders
  • ENIGMA
  • U.S. Department of Energy
  • Energy Biosciences Institute
PUBLISHED 29 Jun 2017
https://doi.org/10.12688/f1000research.11997.1
Software Tool Article metrics
valr: Reproducible genome interval analysis in R
[version 1; peer review: 2 approved]
Kent A. Riemondy, Ryan M. Sheridan, Austin Gillen, Yinni Yu, Christopher G. Bennett, Jay R. Hesselberth
Peer Reviewers Robert A. Amezquita; Ryan K. Dale
  • Funders
  • U.S. National Library of Medicine
  • National Institutes of Health
  • Colorado Office of Economic Development and International Trade
  • BioFrontiers Institute, University of Colorado Boulder
  • University of Colorado
PUBLISHED 29 Jun 2017
https://doi.org/10.12688/f1000research.11398.1
Review metrics
Current progress and future perspectives in the development of anti-polo-like kinase 1 therapeutic agents
[version 1; peer review: 4 approved]
Jung-Eun Park, David Hymel, Terrence R. Burke, Jr., Kyung S. Lee
Peer Reviewers Xiaoqi Liu; Taebo Sim; Vincent Archambault; Wei Dai
  • Funder
  • The Intramural Research Program of the National Institutes of Health (NIH) National Cancer Institute (NCI)
PUBLISHED 29 Jun 2017
https://doi.org/10.12688/f1000research.11610.1
Opinion Article metrics
Sanger sequencing as a first-line approach for molecular diagnosis of Andersen-Tawil syndrome
[version 1; peer review: 3 approved]
Armando Totomoch-Serra, Manlio F. Marquez, David E. Cervantes-Barragán
Peer Reviewers Oscar Campuzano; Estelle Gandjbakhch; Coeli M. Lopes and Diomedes E. Logothetis
PUBLISHED 28 Jun 2017
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