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https://doi.org/10.12688/f1000research.124234.1
Research Article metrics
Mathematical model analysis and numerical simulation of intervention strategies to reduce transmission and re-activation of hepatitis B disease
[version 1; peer review: 1 approved with reservations, 1 not approved]
Firaol Asfaw Wodajo, Temesgen Tibebu Mekonnen
Peer Reviewers Mahmood Parsamanesh; Adnan Khan
PUBLISHED 12 Aug 2022
https://doi.org/10.12688/f1000research.20229.2
Research Article metrics
Revised
Statistical models for the deterioration of kidney function in a primary care population: A retrospective database analysis
[version 2; peer review: 2 approved]
Jason L Oke, Benjamin G Feakins, Iryna Schlackow, Borislava Mihaylova, Claire Simons, Chris A O'Callaghan, Daniel S Lasserson, F D Richard Hobbs, Richard J Stevens, Rafael Perera
Peer Reviewers Dorothea Nitsch; Lawrence Hunsicker
  • Funders
  • National Institute for Health Research
  • NIHR Oxford Biomedical Research Centre
  • NIHR School for Primary Care Research
LATEST VERSION PUBLISHED 08 Aug 2022
https://doi.org/10.12688/f1000research.122429.1
Review metrics AWAITING PEER REVIEW
Dysbiosis: Gut feeling
[version 1; peer review: awaiting peer review]
Rekha Jalandra, Ruby Dhar, Karthikeyan Pethusamy, Minakshi Sharma, Subhradip Karmakar
Peer Reviewers Invited
  • Funder
  • CSIR
PUBLISHED 08 Aug 2022
https://doi.org/10.12688/f1000research.51749.2
Method Article metrics
Revised
satuRn: Scalable analysis of differential transcript usage for bulk and single-cell RNA-sequencing applications
[version 2; peer review: 2 approved]
Jeroen Gilis, Kristoffer Vitting-Seerup, Koen Van den Berge, Lieven Clement
Peer Reviewers Marek Cmero; Alejandro Reyes
  • Funders
  • Belgian American Educational Foundation
  • Fonds Wetenschappelijk Onderzoek
LATEST VERSION PUBLISHED 08 Aug 2022
https://doi.org/10.12688/f1000research.50929.3
Systematic Review metrics
Revised
A systematic review of the case findings, testing and management of COVID-19
[version 3; peer review: 2 approved]
Dewi Susanna, Dian Pratiwi, Sang Gede Purnama
Peer Reviewers Sonu Menachem Maimonides Bhaskar; Rahayu Lubis
  • Funder
  • Directorate of Research and Development Universitas Indonesia
LATEST VERSION PUBLISHED 08 Aug 2022
https://doi.org/10.12688/f1000research.26073.2
Method Article metrics
Revised
An R-based reproducible and user-friendly preprocessing pipeline for CyTOF data
[version 2; peer review: 2 approved]
Helena L. Crowell, Stéphane Chevrier, Andrea Jacobs, Sujana Sivapatham, Tumor Profiler Consortium, Bernd Bodenmiller, Mark D. Robinson
Peer Reviewers Marie Trussart; Felix Hartmann and Sean C. Bendall
  • Funders
  • Universitätsspital Basel
  • Universitätsspital Zürich
  • Roche
  • Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung
  • Universität Zürich
LATEST VERSION PUBLISHED 08 Aug 2022
https://doi.org/10.12688/f1000research.7686.2
Method Article metrics
Revised
How to put plant root uptake into a soil water flow model
[version 2; peer review: 2 approved, 1 approved with reservations]
Xuejun Dong
Peer Reviewers Brijesh K Yadav; Jun Fan; Hirotaka Saito
  • Funders
  • Texas A&M AgriLife Research Hatch
  • USDA NIFA
  • North Dakota Agricultural Experiment Station
LATEST VERSION PUBLISHED 08 Aug 2022
https://doi.org/10.12688/f1000research.75633.1
Systematic Review metrics
Cytotoxic T-lymphocyte associated-protein-4 +49A/G-allele (rs231775) single nucleotide polymorphisms are associated with acute allograft renal transplantation rejection: A multilevel modelling of meta-analysis
[version 1; peer review: 1 approved, 1 approved with reservations]
Besut Daryanto, Athaya Febriantyo Purnomo
Peer Reviewers Yuki Nakagawa; Nurul Cholifah Lutfiana
PUBLISHED 05 Aug 2022
https://doi.org/10.12688/f1000research.121980.1
Research Article metrics
Next-generation sequencing (NGS) reveals low-abundance HIV-1 drug resistance mutations among patients experiencing virological failure at the time of therapy switching in Uganda
[version 1; peer review: 1 approved with reservations]
Maria Magdalene Namaganda, Hakim Sendagire, David Patrick Kateete, Edgar Kigozi, Moses Luutu Nsubuga, Fred Ashaba Katabazi, Jupiter Marina Kabahita, Fredrick Elishama Kakembo, Stephen Kanyerezi, Barbara Castelnuovo, Andrew Kambugu, Isaac Ssewanyana, Chris Okirya, Susan Nabadda, Moses Joloba, Gerald Mboowa
Peer Reviewers Pascal O. Bessong
  • Funders
  • The Africa Center of Excellence in Materials, Product Development and Nanotechnology (MAPRONANO ACE)
  • Fogarty International Center of the National Institutes of Health
  • Nurturing Genomics and Bioinformatics Research Capacity in Africa (BRecA)
  • Health Professions Education and Training for Strengthening the Health System and Services in Uganda (HEPI-SHSSU)
PUBLISHED 04 Aug 2022
https://doi.org/10.12688/f1000research.124267.1
Editorial metrics NOT PEER REVIEWED
A research agenda for open energy science: Opportunities and perspectives of the F1000Research Energy Gateway
[version 1; peer review: not peer reviewed]
Daniel Huppmann, Jethro Browell, Benedetto Nastasi, Zita Vale, Diana Süsser
  • Funder
  • Horizon 2020
PUBLISHED 04 Aug 2022
https://doi.org/10.12688/f1000research.113143.1
Research Article metrics
Adverse COVID-19 vaccination effects in Finnish patients with Ménière’s disease: a cross-sectional study
[version 1; peer review: 1 approved, 2 approved with reservations]
Eldre Beukes, Vinaya Manchaiah, Nora Pyykkö, Ilmari Pyykkö
Peer Reviewers Hari Prakash P; Habib Georges Rizk; Sun-Uk Lee
PUBLISHED 04 Aug 2022
https://doi.org/10.12688/f1000research.52173.4
Software Tool Article metrics
Revised
target: an R package to predict combined function of transcription factors
[version 4; peer review: 1 approved, 1 approved with reservations]
Mahmoud Ahmed, Deok Ryong Kim
Peer Reviewers Shulan Tian and Yan Huihuang; Mireia Ramos-Rodríguez
  • Funder
  • National Research Foundation of Korea
LATEST VERSION PUBLISHED 03 Aug 2022
https://doi.org/10.12688/f1000research.109279.2
Correspondence metrics
Revised
Lupeol and pristimerin do not inhibit activation of the human sperm CatSper Ca(2+)-channel
[version 2; peer review: 2 approved, 1 approved with reservations]
Anders Rehfeld, Christian Marcus Pedersen
Peer Reviewers João Ramalho-Santos; Tao Luo; Huafeng Wang
  • Funder
  • Novo Nordisk Fonden
LATEST VERSION PUBLISHED 02 Aug 2022
https://doi.org/10.12688/f1000research.108804.2
Opinion Article metrics
Revised
Making European performance and impact assessment frameworks for research infrastructures glocal
[version 2; peer review: 2 approved]
Ana M.P. Melo, Sofia Oliveira, Jorge S. Oliveira, Corinne S. Martin, Ricardo B. Leite
Peer Reviewers Eugénio Campos Ferreira; Enrico Guarini and Marialuisa Lavitrano
  • Funders
  • ELIXIR
  • H2020 Research Infrastructures
  • Foundation for Science and Technology - Portugal
LATEST VERSION PUBLISHED 02 Aug 2022
https://doi.org/10.12688/f1000research.73825.2
Opinion Article metrics
Revised
Recommendations for connecting molecular sequence and biodiversity research infrastructures through ELIXIR
[version 2; peer review: 2 approved]
Robert M. Waterhouse, Anne-Françoise Adam-Blondon, Donat Agosti, Petr Baldrian, Bachir Balech, Erwan Corre, Robert P. Davey, Henrik Lantz, Graziano Pesole, Christian Quast, Frank Oliver Glöckner, Niels Raes, Anna Sandionigi, Monica Santamaria, Wouter Addink, Jiri Vohradsky, Amandine Nunes-Jorge, Nils Peder Willassen, Jerry Lanfear
Peer Reviewers Donald Hobern; Anders Andersson
  • Funders
  • Grantová Agentura České Republiky
  • Norges Forskningsråd
  • Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung
  • Ministry of Education, Youth and Sports of the Czech Republic
  • Horizon 2020
  • Arcadia Fund
  • Biotechnology and Biological Sciences Research Council
LATEST VERSION PUBLISHED 01 Aug 2022
https://doi.org/10.12688/f1000research.122312.1
Opinion Article metrics
Community-driven ELIXIR activities in single-cell omics
[version 1; peer review: 2 approved with reservations]
Paulo Czarnewski, Ahmed Mahfouz, Raffaele A. Calogero, Patricia M. Palagi, Laura Portell-Silva, Asier Gonzalez-Uriarte, Charlotte Soneson, Tony Burdett, Barbara Szomolay, Pavankumar Videm, Hans-Rudolf Hotz, Irene Papatheodorou, John M. Hancock, Björn Grüning, Wilfried Haerty, Roland Krause, Salvador Capella-Gutierrez, Brane Leskošek, Luca Alessandri, Maddalena Arigoni, Tadeja Rezen, Alexander Botzki, Polonca Ferk, Jessica Lindvall, Katharina F. Heil, Naveed Ishaque, Eija Korpelainen
Peer Reviewers Xiao-Yang Zhao; Feng Zhu
  • Funders
  • ELIXIR
  • Knut och Alice Wallenbergs Stiftelse
PUBLISHED 29 Jul 2022
https://doi.org/10.12688/f1000research.108008.2
Software Tool Article metrics
Revised
The Neuroimaging Data Model Linear Regression Tool (nidm_linreg): PyNIDM Project
[version 2; peer review: 1 approved, 2 approved with reservations, 1 not approved]
Ashmita Kumar, Albert Crowley, Nazek Queder, JB Poline, Satrajit S. Ghosh, David Kennedy, Jeffrey S. Grethe, Karl G. Helmer, David B. Keator
Peer Reviewers Adam G. Thomas and Eric Earl; Karsten Specht; Tengfei Li; Gabriele Lohmann
  • Funders
  • National Institute of Mental Health
  • International Neuroinformatics Coordinating Facility
  • National Institute of Biomedical Imaging and Bioengineering
LATEST VERSION PUBLISHED 29 Jul 2022
https://doi.org/10.12688/f1000research.109612.1
Research Article metrics
Proximate analysis of the high phytochemical activity of encapsulated Mandai cempedak (Artocarpus champeden) vinegar prepared with maltodextrin and chitosan as wall materials
[version 1; peer review: 1 approved, 1 approved with reservations]
Anton Rahmadi, Siti Nurjannah, Yulian Andriyani, Maghfirotin Marta Banin, Miftakhur Rohmah, Nur Amaliah, Kartika Sari, Aswita Emmawati
Peer Reviewers Gülay Baysal; Faith Seke
  • Funder
  • Indonesian Ministry of Education, Culture, Research, and Technology
PUBLISHED 29 Jul 2022
https://doi.org/10.12688/f1000research.121838.1
Research Article metrics
An exploration of trends and future directions in sustainability performance: A bibliometric analysis of Scopus database
[version 1; peer review: 4 approved with reservations]
Kai Han Yang, Ai Chin Thoo
Peer Reviewers Francisco Jesús Gálvez-Sánchez; Norsiah Hami; Qaisar Iqbal; Raghavendran Sivasubramanian
PUBLISHED 29 Jul 2022
https://doi.org/10.12688/f1000research.122453.1
Review metrics
Understanding floral biology for CRISPR-based modification of color and fragrance in horticultural plants
[version 1; peer review: 2 approved with reservations]
Zulqurnain Khan, Asim Razzaq, Tahmina Sattar, Aftab Ahmed, Sultan Habibullah Khan, Muhammad Zubair Ghouri
Peer Reviewers Muhammad Azam; Albert Chern Sun Wong
PUBLISHED 28 Jul 2022
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