Pathogens

Pathogens

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1-20 of 213 ARTICLES
https://doi.org/10.12688/f1000research.171697.2
Research Article metrics
Revised
Antibiogram, antibiotic resistance genes and health risks of Listeria species from fruits and vegetables in selected locations in Nigeria
[version 2; peer review: 1 approved, 1 approved with reservations]
Peer Reviewers Rahul Vashishth; Bahar Onaran Acar
  • Funder
  • National Research Foundation
LATEST VERSION PUBLISHED 23 Jun 2026
https://doi.org/10.12688/f1000research.178446.2
Review metrics
Revised
Rgg/SHP transcriptional regulators, RaS-RiPPs, and their impacts in streptococci
[version 2; peer review: 1 approved, 2 approved with reservations]
Peer Reviewers Laura Cook; Rozenn Gardan and Quentin Caillot; Reid Wilkening
  • Funder
  • National Institutes of Health
LATEST VERSION PUBLISHED 03 Jun 2026
https://doi.org/10.12688/f1000research.178649.2
Case Report metrics
Revised
Case Report: Primary Cutaneous Aspergillosis in a Neutropenic Child with Pulmonary Dissemination: A case report
[version 2; peer review: 1 approved, 1 approved with reservations]
Peer Reviewers Rim Ben Abdallah; Rim Rakkez
LATEST VERSION PUBLISHED 02 Jun 2026
https://doi.org/10.12688/f1000research.161111.3
Research Article metrics
Revised
East Mediterranean Lineage of Brucella melitensis in Human Isolates and Milk Samples in Oman Using MLVA-14
[version 3; peer review: 2 approved with reservations]
Peer Reviewers Md. Sadequl Islam; AbdulHamid Settenda Lukambagire
  • Funder
  • the research council. Gant No: RC/RG-AGR/ANVS/21/01
LATEST VERSION PUBLISHED 01 Jun 2026
https://doi.org/10.12688/f1000research.172284.1
Review metrics AWAITING PEER REVIEW
Herpes Zoster: An Insight Review on Virulence and Diagnosis
[version 1; peer review: awaiting peer review]
Peer Reviewers Invited
PUBLISHED 22 May 2026
https://doi.org/10.12688/f1000research.177569.1
Genome Note metrics
The complete and annotated mitochondrial genome of Hemileia vastatrix Race I, causal agent of coffee leaf rust
[version 1; peer review: 1 approved]
Peer Reviewers Theo Llewellyn
  • Funder
  • Colombian Coffee Growers Federation (FNC) / National Coffee Research Center (CENICAFE)
PUBLISHED 19 May 2026
https://doi.org/10.12688/f1000research.180294.1
Research Article metrics
Genomic characterization of ESBL-producing Escherichia coli isolates from patients in an orthopaedic ward in Mwanza, Tanzania
[version 1; peer review: 2 approved with reservations]
Peer Reviewers Ayorinde O Afolayan; Sijo Asokan
  • Funders
  • Fogarty International Center of the National Institutes of Health
  • Grand Challenges Africa programme
  • Grand Challenges Africa programme
PUBLISHED 05 May 2026
https://doi.org/10.12688/f1000research.109673.3
Research Article metrics
Revised
Denaturing and dNTPs reagents improve SARS-CoV-2 detection via single and multiplex RT-qPCR
[version 3; peer review: 1 approved, 1 approved with reservations]
Peer Reviewers Andrew D. Beggs; Juan Sebastian Quintero Barbosa
  • Funders
  • Ministry of Science, Technology, and Innovation of Colombia (MinCiencias)
  • Vice-Rectory of Research and Extension of Industrial University of Santander
LATEST VERSION PUBLISHED 02 May 2026
https://doi.org/10.12688/f1000research.179903.1
Genome Note metrics
Complete genome sequence of Halorubrum pleomorphic virus 8
[version 1; peer review: 1 approved]
Peer Reviewers Jimmy Saw
  • Funders
  • the University of Helsinki and Research Council of Finland by funding for FINStruct and Instruct Centre FI, part of Biocenter Finland and Instruct-ERIC and Horizon MSCA
  • Research Council of Finland
  • Helsinki University Library
  • European Research Council (ERC) under the European Union’s Horizon Europe research and innovation programme
  • Kone Foundation
PUBLISHED 30 Apr 2026
https://doi.org/10.12688/f1000research.179781.1
Research Article metrics AWAITING PEER REVIEW
Attitudes, Perceptions, and Preparedness for Viral Hemorrhagic Fever Outbreaks Among Medical Students in Uganda.
[version 1; peer review: awaiting peer review]
Peer Reviewers Invited
  • Funder
  • The Rainier Arnhold Senior House Officer Teaching Support (RASHOTS)
PUBLISHED 29 Apr 2026
https://doi.org/10.12688/f1000research.171863.2
Genome Note metrics
Revised
Draft genome sequence of a predatory bacterium from northern peatland soil
[version 2; peer review: 1 approved with reservations]
Peer Reviewers Kai Blin and Judit Szenei
  • Funders
  • Research Council of Finland
  • Kone Foundation
LATEST VERSION PUBLISHED 28 Apr 2026
https://doi.org/10.12688/f1000research.179711.1
Systematic Review metrics
Mycotoxin Occurrence and the Influence of Fermentation and Storage Practices in Traditional Nigerian Fermented Foods: A Systematic Review and Quantitative Synthesis
[version 1; peer review: 1 approved with reservations]
Peer Reviewers Nazish Muzaffar
PUBLISHED 22 Apr 2026
https://doi.org/10.12688/f1000research.164631.3
Brief Report metrics
Revised
Emerging pathogens associated with acute respiratory infections in children in Hanoi, Vietnam: an analysis of microbiology assay data from 2019 to 2023
[version 3; peer review: 1 approved, 1 not approved]
Peer Reviewers Gabriel Montenegro de Campos; Temesgen Zewotir
  • Funder
  • Vinmec Healthcare System
LATEST VERSION PUBLISHED 20 Apr 2026
https://doi.org/10.12688/f1000research.172533.1
Research Article metrics AWAITING PEER REVIEW
Role of knowledge, attitude, and practice behaviors in preventing COVID-19 infection and transmission  in  the  early phase of the pandemic among airport taxi drivers in Thailand: A structural equation modeling approach
[version 1; peer review: awaiting peer review]
Peer Reviewers Invited
  • Funder
  • This study was supported by the Ramathibodi School of Nursing, Faculty of Medicine, Ramathibodi Hospital, Mahidol University
PUBLISHED 06 Mar 2026
https://doi.org/10.12688/f1000research.177155.1
Research Article metrics
Synergistic antibacterial activity of Salvia officinalis and Rosmarinus officinalis L. extracts against oral pathogens: An In Vitro Study
[version 1; peer review: 1 approved with reservations, 2 not approved]
Peer Reviewers Santi Chismirina; Sarmad S. Salih Al Qassar; Noor Nourie Abbass
PUBLISHED 18 Feb 2026
https://doi.org/10.12688/f1000research.175212.1
Research Article metrics
Isolation of Staphylococcus spp. from Eye Infections and Molecular Characterization of Selected Isolates with the Highest Levels of Resistance
[version 1; peer review: 2 not approved]
Peer Reviewers Catarina Freitas; Patryk Wiśniewski
PUBLISHED 09 Feb 2026
https://doi.org/10.12688/f1000research.173479.1
Research Article metrics AWAITING PEER REVIEW
PCR-based detection reveals threefold underdiagnoses of Group A Streptococcus and Pathogenic Non-Group A Streptococci Predominance in Iraqi Tonsillitis Patients
[version 1; peer review: awaiting peer review]
Peer Reviewers Invited
PUBLISHED 16 Jan 2026
https://doi.org/10.12688/f1000research.169601.3
Method Article metrics
Revised
Graph-based epidemic modeling of West Nile Virus: Forecasting and containment
[version 3; peer review: 2 approved, 1 approved with reservations]
Peer Reviewers Michael Wimberly; Laura Antonelli; Katrin Gaardbo Kuhn and Gargi Deshpande
LATEST VERSION PUBLISHED 19 Dec 2025
https://doi.org/10.12688/f1000research.169913.1
Research Article metrics
Biofilm formation in carbapenem-resistant Acinetobacter baumannii: Investigating the prevalence of the pgaABCD locus in clinical isolates
[version 1; peer review: 1 approved, 1 approved with reservations]
Peer Reviewers Chongbing Liao; Fatima Mourabiti
PUBLISHED 24 Nov 2025
https://doi.org/10.12688/f1000research.169930.1
Research Article metrics
The Changing Bacteriological Profile of Early-Onset Neonatal Bacterial Infections
[version 1; peer review: 1 approved]
Peer Reviewers Diomède Noukeu Njinkui
PUBLISHED 17 Nov 2025
1-20 of 213 ARTICLES
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