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 in 
https://doi.org/10.12688/f1000research.129923.2
Research Article metrics
Revised
Brain-localized CD4 and CD8 T cells perform correlated random walks and not Levy walks
[version 2; peer review: 3 approved]
Dhruv Patel, Raymond Lin, Barun Majumder, Vitaly V. Ganusov
Peer Reviewers Rob De Boer; Masato S. Abe; Jens Stein
  • Funder
  • National Institutes of Health
LATEST VERSION PUBLISHED 03 Oct 2023
https://doi.org/10.12688/f1000research.139488.1
Software Tool Article metrics
Scalable and versatile container-based pipelines for de novo genome assembly and bacterial annotation.
[version 1; peer review: 2 approved, 1 approved with reservations]
Felipe Marques de Almeida, Tatiana Amabile de Campos, Georgios Joannis Pappas Jr
Peer Reviewers Abdolrahman Khezri; Abhinav Sharma and Emilyn Costa Conceição; Austin G Davis-Richardson
  • Funders
  • Scholarship by Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)
  • Grant by Fundação de Amparo à Pesquisa do Distrito Federal (FAP-DF)
PUBLISHED 25 Sep 2023
https://doi.org/10.12688/f1000research.130316.1
Research Article metrics
Impact of estrogen and progesterone hormone receptors on the progression of interferon-γ sensitized breast cancer cells
[version 1; peer review: 1 approved, 1 approved with reservations, 1 not approved]
Israa Shihab, Amal Bouzid, Burcu Yener, Alaa Altaie, Poorna Manasa Bhamidimarri, Mouza Al Ameri, Riyad Bendardaf, Mawieh Hamad, Rifat Hamoudi
Peer Reviewers Aamir Ahmed; Wenbin Zhou; Claudia Lanari and Andrés Elia
  • Funders
  • Al-Jalila Foundation
  • ASPIRE Precision Medicine Research Institute Abu Dhabi
PUBLISHED 08 Sep 2023
https://doi.org/10.12688/f1000research.132952.2
Data Note metrics
Revised
Identification of high-performing antibodies for Superoxide dismutase [Cu-Zn] 1 (SOD1) for use in Western blot, immunoprecipitation, and immunofluorescence
[version 2; peer review: 2 approved]
Riham Ayoubi, Walaa Alshafie, Zhipeng You, Kathleen Southern, Peter S. McPherson, Carl Laflamme
Peer Reviewers Nishant N Vaikath; Chi Kwan Tsang
  • Funders
  • Ontario Genomics
  • Canadian Institutes of Health Research Foundation
  • ALS Society of Canada
  • ALS Association
  • Motor Neurone Disease Association
  • Genome Quebec
  • Mitacs
  • Genome Canada
LATEST VERSION PUBLISHED 31 Aug 2023
https://doi.org/10.12688/f1000research.133203.1
Research Article metrics
An integrated RNA-proteomic landscape of drug induced senescence in a cancer cell line
[version 1; peer review: 1 approved, 1 approved with reservations]
Maha Al-Roshdi, Thomas Stevenson, Franziska Görtler, Sushma Nagaraja Grellscheid
Peer Reviewers Ines Heiland; Kotb Abdelmohsen
  • Funders
  • European Union’s Horizon 2020 research and innovation programme (MESI-STRAT)
  • Trond Mohn Stiftelse
PUBLISHED 21 Aug 2023
https://doi.org/10.12688/f1000research.136998.3
Research Article metrics
Revised
The impact of shift-work light conditions on tissue-specific circadian rhythms of canonical clock genes: insights from a mouse model study
[version 3; peer review: 2 approved]
Bala S. C. Koritala, Panshak P. Dakup, Kenneth I. Porter, Shobhan Gaddameedhi
Peer Reviewers Tianpeng Zhang; Brian J. Altman
  • Funder
  • National Institutes of Health grant
LATEST VERSION PUBLISHED 17 Aug 2023
https://doi.org/10.12688/f1000research.126243.2
Review metrics
Revised
Integration of single-cell RNA sequencing and spatial transcriptomics to reveal the glioblastoma heterogeneity
[version 2; peer review: 3 approved]
Adrian Perdyan, Urszula Lawrynowicz, Monika Horbacz, Bozena Kaminska, Jakub Mieczkowski
Peer Reviewers Dieter Henrik Heiland; Theo Mantamadiotis; Georges Nemer
  • Funders
  • Fundacja na rzecz Nauki Polskiej
  • Narodowe Centrum Nauki
  • National Science Centre
LATEST VERSION PUBLISHED 09 Aug 2023
https://doi.org/10.12688/f1000research.129562.2
Research Article metrics
Revised
Enhanced human periodontal ligament stem cell viability and osteogenic differentiation on two implant materials: An experimental in vitro study
[version 2; peer review: 2 approved]
Sara F. El Shafei, Shereen N. Raafat, Engy A. Farag
Peer Reviewers Samar Darwish; Sahar El Refai
  • Funder
  • Study was self funded
LATEST VERSION PUBLISHED 08 Aug 2023
https://doi.org/10.12688/f1000research.74506.3
Review metrics
Revised
Continued dysregulation of the B cell lineage promotes multiple sclerosis activity despite disease modifying therapies
[version 3; peer review: 2 approved]
Ana C. Londoño, Carlos A. Mora
Peer Reviewers Mickaël Bonnan; Maria Teresa Cencioni
LATEST VERSION PUBLISHED 01 Aug 2023
https://doi.org/10.12688/f1000research.139755.1
Data Note metrics
The identification of high-performing antibodies for Charged multivesicular body protein 2b for use in Western Blot, immunoprecipitation and immunofluorescence
[version 1; peer review: 2 approved]
Walaa Alshafie, Maryam Fotouhi, Riham Ayoubi, Irina Shlaifer, Kathleen Southern, Peter S. McPherson, Carl Laflamme, NeuroSGC/YCharOS/EDDU collaborative group
Peer Reviewers Emma L. Clayton; Xiao-Xin Yan
  • Funders
  • Ontario Genomics
  • Canadian Institutes of Health Research Foundation
  • ALS Society of Canada
  • ALS Association
  • Motor Neurone Disease Association
  • Genome Quebec
  • Mitacs
  • Genome Canada
PUBLISHED 25 Jul 2023
https://doi.org/10.12688/f1000research.133852.1
Research Article metrics
Synergistic effect of the combination of Chrysanthemum cinerariifolium (Trev.) and doxorubicin in inhibiting PI3K and Cyclin D in oral squamous cell carcinoma: in vitro study
[version 1; peer review: 1 approved with reservations]
Anik Listiyana, Yuanita Lely Rachmawati, Hani Susianti, Nurdiana Nurdiana, Hidayat Sujuti, Roihatul Mutiah, Agustina Tri Endharti
Peer Reviewers Laiping Zhong
  • Funder
  • Ministry of Religion of the Republic of Indonesia
PUBLISHED 25 Jul 2023
https://doi.org/10.12688/f1000research.131861.2
Research Article metrics
Revised
Single-cell transcriptional uncertainty landscape of cell differentiation
[version 2; peer review: 2 approved]
Nan Papili Gao, Olivier Gandrillon, András Páldi, Ulysse Herbach, Rudiyanto Gunawan
Peer Reviewers Alessandro Giuliani; Geneviève Dupont
  • Funders
  • Swiss National Science Foundation
  • Agence Nationale de la Recherche
LATEST VERSION PUBLISHED 20 Jul 2023
https://doi.org/10.12688/f1000research.131852.2
Data Note metrics
Revised
The identification of high-performing antibodies for TDP-43 for use in Western Blot, immunoprecipitation and immunofluorescence
[version 2; peer review: 2 approved]
Donovan Worrall, Riham Ayoubi, Maryam Fotouhi, Kathleen Southern, Peter S. McPherson, Carl Laflamme, NeuroSGC/YCharOS/EDDU collaborative group, ABIF Consortium
Peer Reviewers Makoto Urushitani; Seiji Watanabe
  • Funders
  • Ontario Genomics
  • Canadian Institutes of Health Research Foundation
  • ALS Society of Canada
  • ALS Association
  • Motor Neurone Disease Association
  • Genome Quebec
  • Mitacs
  • Genome Canada
LATEST VERSION PUBLISHED 20 Jun 2023
https://doi.org/10.12688/f1000research.134023.1
Research Article metrics
Anti-inflammatory effects of oral cannabidiol in rat models
[version 1; peer review: 1 approved with reservations, 1 not approved]
Sitthiphon Bunman, Sombat Muengtaweepongsa, Dilok Piyayotai, Ratthaphol Charlermroj, Korawit Kanjana, Sudtida Kaew-amdee, Manlika Makornwattana, Sanghyun Kim
Peer Reviewers Marco Biagi; Gökhan Arslan
  • Funder
  • Thammasat University
PUBLISHED 15 Jun 2023
https://doi.org/10.12688/f1000research.133095.1
Research Article metrics
Association of PD-L1 immunoexpression with the clinicopathological characteristics and its prognostic significance in OPMD and OSCC: A cross-sectional study
[version 1; peer review: 2 approved with reservations]
Shelley Rajendra Durge, Alka Hande, Samiha Khan, Madhuri Nitin Gawande, Swati K Patil, Archana Sonone, Aayushi Pakhale
Peer Reviewers Simin Li; Baris Ertugrul
PUBLISHED 14 Jun 2023
https://doi.org/10.12688/f1000research.130883.1
Research Article metrics
Feasibility and guidelines for the use of an injectable fiducial marker (BioXmark®) to improve target delineation in preclinical radiotherapy studies using mouse models.
[version 1; peer review: 1 approved, 2 approved with reservations]
Kathryn Brown, Mihaela Ghita, Kevin M Prise, Karl T Butterworth
Peer Reviewers Emma Biglin; Jane Sosabowski and Rebecca Carter; Katrina Stevenson
  • Funder
  • National Centre for the Replacement Refinement and Reduction of Animals in Research
PUBLISHED 22 May 2023
https://doi.org/10.12688/f1000research.121829.3
Research Article metrics
Revised
Integration of single-cell RNA-Seq and CyTOF data characterises heterogeneity of rare cell subpopulations
[version 3; peer review: 1 approved, 1 approved with reservations]
Emmanouela Repapi, Devika Agarwal, Giorgio Napolitani, David Sims, Stephen Taylor
Peer Reviewers Tallulah Andrews; Xiang Chen
  • Funders
  • Wellcome
  • UK Research and Innovation
LATEST VERSION PUBLISHED 02 May 2023
https://doi.org/10.12688/f1000research.131414.1
Research Article metrics
Preserved correlation matrices pinpoint extracellular matrix organization as a critical factor in pancreatic ductal adenocarcinoma
[version 1; peer review: 1 approved, 1 approved with reservations]
Otília Menyhart, Áron Bartha, Balázs Győrffy
Peer Reviewers Stephan Joel Reshkin; Howard Crawford
  • Funder
  • Nemzeti Kutatási Fejlesztési és Innovációs Hivatal
PUBLISHED 18 Apr 2023
https://doi.org/10.12688/f1000research.127234.2
Review metrics
Revised
Different levels of circadian (de)synchrony ­– where does it hurt?
[version 2; peer review: 2 approved]
Ankita AS. Galinde, Faheem Al-Mughales, Henrik Oster, Isabel Heyde
Peer Reviewers Frank A.J.L. Scheer; Andrew N. Coogan
  • Funders
  • Deutscher Akademischer Austauschdienst
  • Deutsche Forschungsgemeinschaft
LATEST VERSION PUBLISHED 03 Apr 2023
https://doi.org/10.12688/f1000research.129250.3
Research Article metrics
Revised
Goji berry (Lycium barbarum) inhibits the proliferation, adhesion, and migration of oral cancer cells by inhibiting the ERK, AKT, and CyclinD cell signaling pathways: an in-vitro study
[version 3; peer review: 2 approved]
Amee Sanghavi, Ananth Srivatsa, Divya Adiga, Aditi Chopra, Richard Lobo, Shama Prasada Kabekkodu, Shivaprasada Gadag, Usha Nayak, Karthik Sivaraman, Ashmeet Shah
Peer Reviewers Swagat Ray; Poornima Rajendran
  • Funder
  • Indian Council of Medical Research
LATEST VERSION PUBLISHED 01 Mar 2023
61-80 of 800 ARTICLES
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