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https://doi.org/10.12688/f1000research.51143.1
Software Tool Article metrics
periodicDNA: an R/Bioconductor package to investigate k-mer periodicity in DNA
[version 1; peer review: 1 approved, 3 approved with reservations]
Jacques Serizay, Julie Ahringer
Peer Reviewers Ilya Ioshikhes; Sabarinathan Radhakrishnan; Eugene Korotkov; Boris Lenhard
  • Funders
  • Wellcome Trust Senior Research Fellowship
  • Medical Research Council DTP studentship
PUBLISHED 24 Feb 2021
https://doi.org/10.12688/f1000research.25164.2
Study Protocol metrics
Revised
Protocol for a controlled, randomized, blind, clinical trial to assess the effects of anodal transcranial direct current stimulation dorsolateral prefrontal cortex associated with balance training using games in the postural balance of older people
[version 2; peer review: 2 approved]
Andre Issao Kunitake, João Carlos Ferrari Corrêa, Klaine Silva Nascimento, Bianca Barioni Cardoso de Oliveira, Natalia Maciel Muniz, Soraia Micaela Silva, Fernanda Ishida Corrêa
Peer Reviewers Fernando Zanela da Silva Arêas; Rodrigo Vitório
  • Funder
  • Coordenação de Aperfeiçoamento de Pessoal de Nível Superior
LATEST VERSION PUBLISHED 23 Feb 2021
https://doi.org/10.12688/f1000research.17511.3
Method Article metrics
Revised
Assembling cheap, high-performance microphones for recording terrestrial wildlife: the Sonitor system
[version 3; peer review: 3 approved]
Kevin F.A. Darras, Bjørn Kolbrek, Andreas Knorr, Volker Meyer, Mike Zippert, Arne Wenzel
Peer Reviewers Sarab S. Sethi; Holger Klinck; Catharina Karlsson
  • Funder
  • Deutsche Forschungsgemeinschaft
LATEST VERSION PUBLISHED 19 Feb 2021
https://doi.org/10.12688/f1000research.24714.3
Brief Report metrics
Revised
biogitflow: development workflow protocols for bioinformatics pipelines with git and GitLab
[version 3; peer review: 2 approved]
Choumouss Kamoun, Julien Roméjon, Henri de Soyres, Apolline Gallois, Elodie Girard, Philippe Hupé
Peer Reviewers Bernard Pope; Julia Ponomarenko
  • Funder
  • Institut National Du Cancer
LATEST VERSION PUBLISHED 19 Feb 2021
https://doi.org/10.12688/f1000research.27140.2
Software Tool Article metrics
Revised
Effective image visualization for publications – a workflow using open access tools and concepts
[version 2; peer review: 2 approved]
Christopher Schmied, Helena Klara Jambor
Peer Reviewers Guillaume Jacquemet; Georgina Fletcher and David Barry
  • Funder
  • Deutsche Krebshilfe
LATEST VERSION PUBLISHED 18 Feb 2021
https://doi.org/10.12688/f1000research.51094.1
Case Report metrics
Case Report: Ziprasidone induced neuroleptic malignant syndrome
[version 1; peer review: 2 approved]
Yub Raj Sedhai, Alok Atreya, Prabin Phuyal, Soney Basnyat, Sagar Pokhrel
Peer Reviewers Prajwal Ghimire; Ashish Saraf
PUBLISHED 17 Feb 2021
https://doi.org/10.12688/f1000research.27504.2
Method Article metrics
Revised
Isolation and primary culture of Galleria mellonella hemocytes for infection studies
[version 2; peer review: 2 approved]
Nicola J. Senior, Richard W. Titball
Peer Reviewers Lauren Ames; Daniel R. Neill and Joanne Fothergill
  • Funder
  • National Centre for the Replacement Refinement and Reduction of Animals in Research
LATEST VERSION PUBLISHED 16 Feb 2021
https://doi.org/10.12688/f1000research.28450.1
Research Article metrics
Defining and validating regenerative farm systems using a composite of ranked agricultural practices
[version 1; peer review: 2 approved]
Tommy L.D. Fenster, Claire E. LaCanne, Jacob R. Pecenka, Ryan B. Schmid, Michael M. Bredeson, Katya M. Busenitz, Alex M. Michels, Kelton D. Welch, Jonathan G. Lundgren
Peer Reviewers John M. Holland and Jenny Bussell; Richard W. Teague
  • Funders
  • North Central SARE
  • Globetrotter Foundation
  • USDA-Pest Management Alternatives Program Grant
  • Ecdysis Foundation
  • Western SARE
PUBLISHED 15 Feb 2021
https://doi.org/10.12688/f1000research.20046.6
Brief Report metrics
Revised
Methane emissions in triple rice cropping: patterns and a method for reduction
[version 6; peer review: 1 approved, 1 approved with reservations, 1 not approved]
Masato Oda, Huu Chiem Nguyen
Peer Reviewers Arika Bridhikitti; Tran Dang Hoa; Kazuyuki Yagi
LATEST VERSION PUBLISHED 15 Feb 2021
https://doi.org/10.12688/f1000research.27036.2
Research Article metrics
Revised
Supplementation of rice husk activated charcoal in feed and its effects on growth and histology of the stomach and intestines from giant trevally, Caranx ignobilis
[version 2; peer review: 2 approved, 1 approved with reservations]
Firdus Firdus, Samadi Samadi, Abdullah A. Muhammadar, Muhammad A. Sarong, Zainal A. Muchlisin, Widya Sari, Siska Mellisa, Satria Satria, Boihaqi Boihaqi, Agung Setia Batubara
Peer Reviewers Karun Thongprajukaew; Reiny A. Tumbol; Siti Azizah Mohd Nor
  • Funder
  • Universitas Syiah Kuala
LATEST VERSION PUBLISHED 15 Feb 2021
https://doi.org/10.12688/f1000research.26872.2
Software Tool Article metrics
Revised
Fiji plugins for qualitative image annotations: routine analysis and application to image classification
[version 2; peer review: 2 approved, 1 approved with reservations]
Laurent S. V. Thomas, Franz Schaefer, Jochen Gehrig
Peer Reviewers Jan Eglinger; Christian Tischer and Aliaksandr Halavatyi; Elisabet Teixido
  • Funder
  • Horizon 2020
LATEST VERSION PUBLISHED 12 Feb 2021
https://doi.org/10.12688/f1000research.26848.2
Software Tool Article metrics
Revised
CompoundHetVIP: Compound Heterozygous Variant Identification Pipeline
[version 2; peer review: 2 approved]
Dustin B. Miller, Stephen R. Piccolo
Peer Reviewers Soohyun Lee; Sushant Patil
LATEST VERSION PUBLISHED 10 Feb 2021
https://doi.org/10.12688/f1000research.27800.1
Research Article metrics
Influence of polymorphisms in the vascular endothelial growth factor gene on allograft rejection after kidney transplantation: a meta-analysis
[version 1; peer review: 2 approved]
Thanee Eiamsitrakoon, Phuntila Tharabenjasin, Noel Pabalan, Hamdi Jarjanazi, Adis Tasanarong
Peer Reviewers Ileana Constantinescu and Ion Maruntelu; Iman Karimzadeh
PUBLISHED 10 Feb 2021
https://doi.org/10.12688/f1000research.24163.2
Method Article metrics
Revised
Spatial mapping of single cells in the Drosophila embryo from transcriptomic data based on topological consistency
[version 2; peer review: 2 approved]
Maryam Zand, Jianhua Ruan
Peer Reviewers Tianci Song and Rui Kuang; Adi Tarca
  • Funders
  • National Institutes of Health
  • National Science Foundation
LATEST VERSION PUBLISHED 09 Feb 2021
https://doi.org/10.12688/f1000research.29978.1
Research Article metrics
Differential activation of c-Fos and Egr1 during development of the mouse visual cortex
[version 1; peer review: 1 approved, 1 approved with reservations]
Anna Ivanova, Pavel Rogozin, Grigori Enikolopov, Konstantin Anokhin, Alexander Lazutkin
Peer Reviewers Alison Barth; Marina Yu Khodanovich
  • Funders
  • Ministry of Science and Higher Education of the Russian Federation
  • Russian Science Foundation
PUBLISHED 08 Feb 2021
https://doi.org/10.12688/f1000research.27629.2
Research Article metrics
Revised
Patient knowledge of fecal calprotectin in inflammatory bowel disease (IBD): An observational study in Mexico
[version 2; peer review: 2 approved]
Brenda Maldonado-Arriaga, Sergio Sandoval-Jiménez, Juan Rodríguez-Silverio, Sofía Lizeth Alcaráz- Estrada, Tomás Cortés-Espinosa, Rebeca Pérez-Cabeza de Vaca, Jonathan Shaw, Paul Mondragón-Terán, Cecilia Hernández-Cortez, Juan Antonio Suárez-Cuenca, Graciela Castro-Escarpulli
Peer Reviewers Javier P Gisbert; Rupert W. Leong
  • Funders
  • institutional program
  • Consejo Nacional de Ciencia y Tecnología
  • Secretaría de Investigación y Posgrado, Instituto Politécnico Nacional
  • Instituto Politécnico Nacional
LATEST VERSION PUBLISHED 05 Feb 2021
https://doi.org/10.12688/f1000research.28359.1
Research Article metrics
Effect of dietary protein level on growth, food utilization, food conversion and survival rate of giant trevally (Caranx ignobilis)
[version 1; peer review: 2 not approved]
Abdullah A. Muhammadar, Firdus Firdus, Zainal A. Muchlisin, Samadi Samadi, Muhammad A. Sarong, Boihaqi Boihaqi, Satria Sartira, Ibnu Sahidir, Agung Setia Batubara
Peer Reviewers Wing Yin Mo; Mohammad Bodrul Munir
  • Funder
  • Universitas Syiah Kuala
PUBLISHED 05 Feb 2021
https://doi.org/10.12688/f1000research.28291.1
Research Article metrics
Analysis of rs1048943 in the CYP1A1 gene in laryngeal cancer - a case control study
[version 1; peer review: 1 approved with reservations, 1 not approved]
Marwa Abdalwahab, Mona Ellaithi
Peer Reviewers Vijaylakshmi Jain; Tracie Cheng
PUBLISHED 05 Feb 2021
https://doi.org/10.12688/f1000research.27112.2
Software Tool Article metrics
Revised
MosaicExplorerJ: Interactive stitching of terabyte-size tiled datasets from lightsheet microscopy
[version 2; peer review: 2 approved]
Sébastien Tosi, Lídia Bardia, Maria Jose Barallobre, Arrate Muñoz-Barrutia, María Luisa Soto-Montenegro, Julien Colombelli
Peer Reviewers Stephan Preibisch; Francesco Pampaloni
  • Funders
  • Instituto de Salud Carlos III
  • Ministerio de Ciencia, Innovación y Universidades
  • Ministerio de Economía y Competitividad
  • European Regional Development Fund
LATEST VERSION PUBLISHED 04 Feb 2021
https://doi.org/10.12688/f1000research.29988.1
Data Note metrics
rt-me-fMRI: a task and resting state dataset for real-time, multi-echo fMRI methods development and validation
[version 1; peer review: 1 approved, 1 approved with reservations]
Stephan Heunis, Marcel Breeuwer, César Caballero-Gaudes, Lydia Hellrung, Willem Huijbers, Jacobus F.A. Jansen, Rolf Lamerichs, Svitlana Zinger, Albert P. Aldenkamp
Peer Reviewers Klaus Mathiak; Christian Paret
  • Funders
  • Spanish Ministry of Science, Innovation and Universities
  • Philips Research
  • Horizon 2020
  • Health-Holland
  • Spanish Ministry of Economy and Competitiveness
  • Basque Government
PUBLISHED 04 Feb 2021
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