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 in 
https://doi.org/10.12688/f1000research.108415.1
Genome Note metrics
The complete mitogenome sequence of clam (Corbicula fluminea)
[version 1; peer review: 1 approved, 1 approved with reservations]
Qing Luo, Jie Pi, Yangxin Tang, Cong Zeng, Deliang Li
Peer Reviewers Xiaotong Wang; Arsalan Emami-Khoyi
  • Funders
  • Hunan Provincial Modern Agricultural Research System
  • National Natural Science Foundation of China
  • Hunan Provincial Scientific and Technological Program
PUBLISHED 24 Feb 2022
https://doi.org/10.12688/f1000research.27763.2
Brief Report metrics
Revised
Runcer-Necromancer: a method to rescue data from an interrupted run on MGISEQ-2000
[version 2; peer review: 1 approved, 1 approved with reservations]
Anna Pavlova, Vera Belova, Robert Afasizhev, Irina Bulusheva, Denis Rebrikov, Dmitriy Korostin
Peer Reviewers Simon Andrews; Sergey Knyazev
  • Funder
  • Ministry of Science and Higher Education of the Russian Federation
LATEST VERSION PUBLISHED 14 Feb 2022
https://doi.org/10.12688/f1000research.26550.2
Research Article metrics
Revised
A novel genotyping method to determine copy number in a mouse line commonly used for inducible transgene expression in brain and spinal cord
[version 2; peer review: 1 approved, 2 approved with reservations]
Eleanor Hobbs, Sarah Ryan, Sara Rollinson, Stuart Allan, Stuart Pickering-Brown
Peer Reviewers Virginia Lee and Mandana Hunter; Keiichi Ishihara; Sandy S. Pineda
  • Funders
  • Medical Research Council
  • Motor Neurone Disease Association
LATEST VERSION PUBLISHED 10 Feb 2022
https://doi.org/10.12688/f1000research.74570.2
Review metrics
Revised
Contribution of BCR-ABL molecular variants and leukemic stem cells in response and resistance to tyrosine kinase inhibitors: a review
[version 2; peer review: 2 approved]
Mohammad Al Hamad
Peer Reviewers Ala-Eddin Al Moustafa; Pinar Arslan
LATEST VERSION PUBLISHED 09 Feb 2022
https://doi.org/10.12688/f1000research.108489.1
Research Article metrics
Quantification of the effects of chimerism on read mapping, differential expression and annotation following short-read de novo assembly.
[version 1; peer review: 2 approved with reservations]
Raquel Linheiro, John Archer
Peer Reviewers Ben J. Mans; Kun Lu Lu
  • Funder
  • Fundacão para a Ciência e a Tecnologia (FCT)
PUBLISHED 31 Jan 2022
https://doi.org/10.12688/f1000research.74254.1
Brief Report metrics
DNA barcoding for the discrimination of Uncaria gambir and its closely related species using internal transcribed spacer genes
[version 1; peer review: 1 approved with reservations, 1 not approved]
Epi Supri Wardi, Sumaryati Syukur, Zulkarnain Chaidir, Jamsari Jamsari, Bastian Nova
Peer Reviewers Jarrett Phillips; Andrey Yurkov
  • Funder
  • Kementerian Riset Teknologi Dan Pendidikan Tinggi Republik Indonesia
PUBLISHED 27 Jan 2022
https://doi.org/10.12688/f1000research.53365.2
Case Report metrics
Revised
Case Report: Priapism as The Clinical Presenting Feature of Chronic Myeloid Leukemia: Case Report and 20-Year Literature Review
[version 2; peer review: 2 approved]
Siprianus Ugroseno Yudho Bintoro, Pradana Zaky Romadhon, Satriyo Dwi Suryantoro, Rusdi Zakki Aminy, Choirina Windradi, Krisnina Nurul Widiyastuti
Peer Reviewers Wulyo Rajabto; Ritu Gupta
LATEST VERSION PUBLISHED 13 Jan 2022
https://doi.org/10.12688/f1000research.73884.3
Systematic Review metrics
Revised
Efficacy, safety, and immunogenicity of rurioctocog alfa pegol for prophylactic treatment in previously treated patients with severe hemophilia A: a systematic review and meta-analysis of clinical trials
[version 3; peer review: 2 approved]
Bendix Samarta Witarto, Visuddho Visuddho, Andro Pramana Witarto, Henry Sutanto, Bayu Satria Wiratama, Citrawati Dyah Kencono Wungu
Peer Reviewers Yelvi Levani; Claudia Djambas Khayat
LATEST VERSION PUBLISHED 13 Jan 2022
https://doi.org/10.12688/f1000research.74018.2
Research Article metrics
Revised
Crystal structure of Pseudomonas aeruginosa FabB C161A, a template for structure-based design for new antibiotics
[version 2; peer review: 2 approved]
Vladyslav Yadrykhins'ky, Charis Georgiou, Ruth Brenk
Peer Reviewers Bjarte A. Lund; Klaus Reuter
  • Funder
  • Norges Forskningsråd
LATEST VERSION PUBLISHED 10 Jan 2022
https://doi.org/10.12688/f1000research.26128.2
Method Article metrics
Revised
Space-log: a novel approach to inferring gene-gene net-works using SPACE model with log penalty
[version 2; peer review: 2 approved, 1 approved with reservations]
Qian (Vicky) Wu, Wei Sun, Li Hsu
Peer Reviewers Yuying Xie and Yuning Hao; Chi Song; Jessie Jeng
  • Funder
  • National Institutes of Health
LATEST VERSION PUBLISHED 05 Jan 2022
https://doi.org/10.12688/f1000research.55301.2
Research Article metrics
Revised
A whole genome atlas of 81 Psilocybe genomes as a resource for psilocybin production.
[version 2; peer review: 1 approved with reservations, 1 not approved]
Kevin McKernan, Liam Kane, Yvonne Helbert, Lei Zhang, Nathan Houde, Stephen McLaughlin
Peer Reviewers Bryn T M Dentinger and Alexander Bradshaw; Sebastiaan Werten
LATEST VERSION PUBLISHED 17 Dec 2021
https://doi.org/10.12688/f1000research.73568.1
Research Article metrics AWAITING PEER REVIEW
May Mutation of SNP rs1800947 Affects Length of Stay Outcome of COVID-19 suspects?
[version 1; peer review: awaiting peer review]
Zulmansyah Zulmansyah, Gaga Irawan Nugraha, Dwi Agustian, Dida Akhmad Gurnida
Peer Reviewers Invited
PUBLISHED 14 Dec 2021
https://doi.org/10.12688/f1000research.73895.1
Systematic Review metrics
Population variation in Y-chromosome microdeletion and its role in the evaluation of male infertility management: a systematic review
[version 1; peer review: 1 approved, 2 not approved]
Ponco Birowo, Isaac Ardianson Deswanto, Widi Atmoko, Nur Rasyid
Peer Reviewers Doddy Moesbadianto Soebadi; Yankai Xia; Özlem Okutman
  • Funder
  • PUTI 2020
PUBLISHED 06 Dec 2021
https://doi.org/10.12688/f1000research.53821.2
Software Tool Article metrics
Revised
snpQT: flexible, reproducible, and comprehensive quality control and imputation of genomic data
[version 2; peer review: 2 approved, 1 approved with reservations]
Christina Vasilopoulou, Benjamin Wingfield, Andrew P. Morris, William Duddy
Peer Reviewers Andries T. Marees; Stephanie M. Gogarten; Anna Ulrich
  • Funders
  • Northern Ireland Public Health Agency (HSC R&D)
  • EU Regional Development Fund (ERDF) EU Sustainable Competitiveness Programme for Northern Ireland
LATEST VERSION PUBLISHED 29 Nov 2021
https://doi.org/10.12688/f1000research.52889.2
Research Article metrics
Revised
Boesenbergia pandurata application in Goldfish (Cyprinus carpio) Feed to Enhancing Fish Growth, Immunity System, and Resistance to Bacterial Infection
[version 2; peer review: 2 approved]
Esti Handayani Hardi, Gina Saptiani, Rudi Agung Nugroho, fadlul Rahman, Sulistyawati Sulistyawati, Widyaningsih Rahayu, Ali Supriansyah, Irawan Wijaya Kusuma
Peer Reviewers Angela Mariana Lusiastuti; A. Abinawanto
  • Funder
  • LPDP Fiscal Year 2019- 2021
LATEST VERSION PUBLISHED 26 Nov 2021
https://doi.org/10.12688/f1000research.74524.1
Brief Report metrics
An Atlas of Plant Transposable Elements
[version 1; peer review: 2 approved]
Daniel Longhi Fernandes Pedro, Tharcisio Soares Amorim, Alessandro Varani, Romain Guyot, Douglas Silva Domingues, Alexandre Rossi Paschoal
Peer Reviewers Gökhan Karakülah; Adriana Ludwig
  • Funders
  • Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - Brasil (CAPES)
  • Conselho Nacional de Desenvolvimento Científico e Tecnológico
  • NAPI de Bioinformática - Fundação Araucária
  • NVIDIA from the GPU Grant Program 2019 - Accelerated Data Science Call for the GPU Seed Units: Titan V device
  • PROPPG - UTFPR
PUBLISHED 24 Nov 2021
https://doi.org/10.12688/f1000research.74727.1
Data Note metrics
Ribo-Seq and RNA-Seq of TMA46 (DFRP1) and GIR2 (DFRP2) knockout yeast strains
[version 1; peer review: 3 approved]
Artyom A. Egorov, Desislava S. Makeeva, Nadezhda E. Makarova, Dmitri A. Bykov, Yanislav S. Hrytseniuk, Olga V. Mitkevich, Valery N. Urakov, Alexander I. Alexandrov, Ivan V. Kulakovskiy, Sergey E. Dmitriev
Peer Reviewers Anton A. Komar; Olivier Namy; Nikolay E. Shirokikh and Katrina Woodward
  • Funders
  • Ministry of Science and Higher Education of the Russian Federation
  • Russian Foundation for Basic Research
  • Russian Science Foundation
PUBLISHED 16 Nov 2021
https://doi.org/10.12688/f1000research.53221.3
Research Article metrics
Revised
Molecular Epidemiological Surveillance of CTX-M-15-producing Klebsiella pneumoniae from the patients of a teaching hospital in Sindh, Pakistan.
[version 3; peer review: 3 approved]
Muzaheed Muzaheed, Naveed Sattar Shaikh, Saeed Sattar Shaikh, Sadananda Acharya, Shajiya Sarwar Moosa, Mohammad Habeeb Shaikh, Faisal M. Alzahrani, Amer Ibrahim Alomar
Peer Reviewers SUPRIT DESHPANDE; Abbas Farahani; Mubashir Zafar
LATEST VERSION PUBLISHED 15 Nov 2021
https://doi.org/10.12688/f1000research.54533.2
Software Tool Article metrics
Revised
RNfuzzyApp: an R shiny RNA-seq data analysis app for visualisation, differential expression analysis, time-series clustering and enrichment analysis
[version 2; peer review: 3 approved]
Margaux Haering, Bianca H Habermann
Peer Reviewers Oliver Hahn; Rhonda Bacher; Anita Grigoriadis
  • Funder
  • Agence Nationale de la Recherche
LATEST VERSION PUBLISHED 12 Nov 2021
https://doi.org/10.12688/f1000research.73641.1
Software Tool Article metrics
PlotXpress, a webtool for normalization and visualization of reporter expression data
[version 1; peer review: 3 approved]
Elias Brandorff, Marc Galland, Joachim Goedhart
Peer Reviewers Lorena Pantano Rubino; Guillaume Jacquemet; Vincent J. Lynch
PUBLISHED 08 Nov 2021
161-180 of 2,028 ARTICLES
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