Genomics and Genetics
Genomics and Genetics
Research Article
metrics
AWAITING PEER REVIEW
First Gonadal Stages of Bonito, Sarda chiliensis (Perciformes: Scombridae) on the Pacific Coast of Northern Chile
[version 1; peer review: awaiting peer review]
Peer Reviewers
Invited
- Funder
- Arturo Prat University
Genome Note
metrics
AWAITING PEER REVIEW
The first whole-genome sequence of a prospective novel sponge-associated Streptomyces strain from Indonesia with a long 1.5 Mbp terminal inverted repeat
[version 1; peer review: awaiting peer review]
Peer Reviewers
Invited
- Funders
- Rumah Program Biodiversitas, ORHL-BRIN
- Rumah Program Artificial, Intelligence, Big Data & Teknologi Komputasi, OREI-BRIN
- Riset dan Inovasi untuk Indonesia Maju—Indonesia Endowment Funds for Education (LPDP)
Research Article
metrics
AWAITING PEER REVIEW
The Genetic Association of Single Nucleotide Polymorphisms of SERPINE1 (rs6092) and IFNAR2 (rs1051393, rs2229207) Genes Is Related to Post Covid-19 Respiratory Syndrome
[version 1; peer review: awaiting peer review]
Peer Reviewers
Invited
- Funder
- Riset Inovasi dan Indonesia Maju–Lembaga Pengelola Dana Pendidikan
Genome Note
metrics
Revised
The complete chloroplast genome of Phyllanthus acidus (L.) Skeels (Phyllanthaceae)
[version 3; peer review: 3 approved with reservations]
Peer Reviewers
Jessica D. Rey;
Qiang Li;
Shiou Yih Lee
- Funder
- Nguyen Tat Thanh University
Review
metrics
Revised
White paper: standards for handling and analyzing plant pan-genomes
[version 2; peer review: 1 approved, 1 approved with reservations]
Peer Reviewers
Sunil Kumar Sahu;
Xiaoming Xie
- Funders
- ELIXIR under the call for proposals on Biodiversity, Food Safety and Pathogens
- Federal Ministry of Education and Research
Genome Note
metrics
Revised
Reference-guided draft genome assembly of the slender walking catfish, Prophagorus nieuhofii
[version 2; peer review: 2 approved with reservations, 1 not approved]
Peer Reviewers
Gulab D. Khedkar;
Geoffrey C. Waldbieser;
Haiyang Liu
- Funder
- Lembaga Pengelola Dana Pendidikan
Research Article
metrics
AWAITING PEER REVIEW
Identification of Pathogenic PKHD1 Variants in Infants with Autosomal Recessive Polycystic Kidney Disease from the Dhofar Region, Oman
[version 1; peer review: awaiting peer review]
Peer Reviewers
Invited
- Funders
- Kidney Research UK
- LifeArc
- Horizon Europe
- Medical Research Council
Genome Note
metrics
Chromosome-level genome assembly of the hamour (orange-spotted grouper), Epinephelus coioides
[version 1; peer review: 2 approved]
Peer Reviewers
Jayan Duminda M Senevirathna;
Merly Escalona
- Funders
- Spanish Government, Ministry of Science, Innovation and Universities and Generalitat de Catalunya through the Departament de Recerca i Universitats and Departament de Salut
- Qatar National Research Fund
- Roslin Institute Strategic Programme Award
Research Article
metrics
Characterization of the Complete Mitochondrial Genome and Evaluation of COI Barcoding in Philonis inermis (Coleoptera: Curculionidae: Cryptorhynchinae) Using Genome Skimming
[version 1; peer review: 2 approved with reservations]
Peer Reviewers
Renee Ali;
Michael J Raupach
- Funder
- This research was funded by the Gorgon Barrow Island Net Conservation Benefits Fund, administered by the Government of Western Australia, the Commonwealth Scientific and Industrial Research Organi-sation (CSIRO), and the Department of Biodiversity, Conservation and Attractions. Additional support was provided by Project Hermes 57653 (Universidad Nacional de Colombia, Sede Medellín).
Study Protocol
metrics
Revised
Comparison of serum vitamin D level and vitamin D receptor gene FokI polymorphism in leprosy patients with and without trophic ulcers: protocol for a case-control study
[version 3; peer review: 3 approved with reservations]
Peer Reviewers
Khairuddin Djawad;
Ravindra Turankar;
ANABELL ALVARADO NAVARRO
- Funder
- Research and Development, Universitas Indonesia under the Hibah PUTI 2023 scheme
Genome Note
metrics
Draft genome sequence of a predatory bacterium from northern peatland soil
[version 1; peer review: 1 approved with reservations]
Peer Reviewers
Kai Blin and Judit Szenei
- Funders
- Research Council of Finland
- Kone Foundation
Software Tool Article
metrics
AWAITING PEER REVIEW
DirectRepeateR: An R package for annotating direct repeats in genome assemblies
[version 1; peer review: awaiting peer review]
Peer Reviewers
Invited
- Funders
- National Institute of Allergies and Infectious Diseases, National Institutes of Health
- National Institute of General Medical Sciences at the National Institutes of Health
Genome Note
metrics
Revised
The complete mitochondrial genome Hainan Gymnure, Neohylomys hainanensis
[version 2; peer review: 2 approved, 1 approved with reservations]
Peer Reviewers
Michael Allen;
Perinçek Seçkinozan Şeker;
Kai He
- Funder
- Natural Science Foundation of Hainan Province
Review
metrics
AWAITING PEER REVIEW
Mechanisms Associated with PINK1 Mutations in Parkinson's Disease
[version 1; peer review: awaiting peer review]
Peer Reviewers
Invited
Research Article
metrics
Revised
Peripheral Blood Expression of MMPs and DNA Methylation-Related Genes in Women with Recurrent Spontaneous Abortion: A Case-Control Study
[version 2; peer review: 2 approved]
Peer Reviewers
Noor Nihad Baqer;
Nafisa Huseni Balasinor
Research Article
metrics
Revised
Distribution of CYP2D6 multiplication, CYP2D6*5, and clinical implications in postoperative patients receiving tramadol analgesia in the Minangkabau ethnic group, Indonesia
[version 3; peer review: 2 approved]
Peer Reviewers
Heri Setiawan;
Anom Bowolaksono
- Funder
- Rumah Program Organisasi Riset Ilmu Pengetahuan Teknik, Badan Riset dan Inovasi Nasional 2022
Genome Note
metrics
Revised
The genome sequence of Tethysbaena scabra (Pretus, 1991), the first known in the peracarid crustacean order Thermosbaenacea.
[version 3; peer review: 2 approved]
Peer Reviewers
Pascal Angst;
Martin Schwentner
- Funders
- Govern de les Illes Balears
- Institut d'Estudis Catalans
Research Article
metrics
Pharmacogenomic Profiling of Frequently Prescribed Medications Among Geriatric Patients in a Tertiary Care Setting in Southwestern India
[version 1; peer review: 1 not approved]
Peer Reviewers
Harri Hardi
Research Article
metrics
Detection Rate of Human Papilloma Virus Genotype 16 / 18 infections in Brain Tissues from a group of Iraqi Patients with Glioblastoma Multiforme: An In Situ Hybridization Study.
[version 1; peer review: 2 approved with reservations]
Peer Reviewers
Raziye Piranlioglu and Emerenziana Runco;
Lucia E. Azuara-Alvarez and Giovanni Palomino Vizcaino
- Funder
- none
Genome Note
metrics
The genome sequence of the red-legged partridge, Alectoris rufa Linnaeus 1758
[version 1; peer review: 2 approved]
Peer Reviewers
Marc Palmada-Flores;
Greta Bellinzona
- Funders
- Departament d'Innovació, Universitats i Empresa, Generalitat de Catalunya
- Fundação para a Ciência e a Tecnologia
- Fundacio Rovira i Virgili
- European Research Council
- Secretaria d’Universitats i Recerca del Departament d’Economia i Coneixement