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181-200 of 5,602 ARTICLES
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 in 
https://doi.org/10.12688/f1000research.166538.2
Review metrics
Revised
White paper: standards for handling and analyzing plant pan-genomes
[version 2; peer review: 2 approved, 2 approved with reservations]
Marc C. Heuermann, Pedro Barros, Sebastian Beier, Heidrun Gundlach, Jorge Alvarez-Jarreta, Keywan Hassani-Pak, Patrick König, Anne Fiebig, Tim Godec, Kristina Gruden, Nadja Nolte, Marko Petek, Uwe Scholz, Maja Zagorščak, Klaas Vandepoele, Michiel Van Bel
Peer Reviewers Sunil Kumar Sahu; Xiaoming Xie; Rutwik Barmukh; Jianping Xu
  • Funders
  • ELIXIR under the call for proposals on Biodiversity, Food Safety and Pathogens
  • Federal Ministry of Education and Research
LATEST VERSION PUBLISHED 18 Nov 2025
https://doi.org/10.12688/f1000research.172567.1
Research Article metrics AWAITING PEER REVIEW
Linking chemical data from the Comparative Toxicogenomics Database with adverse outcome pathways from the AOP-Wiki: a mechanistic data-oriented approach to help inform environmental health
[version 1; peer review: awaiting peer review]
Allan Peter Davis, Thomas C. Wiegers, Daniela Sciaky, Fern Barkalow, Brent Wyatt, Jolene Wiegers, Roy McMorran, Sakib Abrar, Carolyn J. Mattingly
Peer Reviewers Invited
  • Funder
  • National Institute of Environmental Health Sciences
PUBLISHED 17 Nov 2025
https://doi.org/10.12688/f1000research.169930.1
Research Article metrics
The Changing Bacteriological Profile of Early-Onset Neonatal Bacterial Infections
[version 1; peer review: 1 approved]
Donia Terzi, Wiem Barbaria, Wissal Jaafar, Farah Maatouk, Malak Medemagh, Manel Bourcheda, Mechaal Mourali, Ichrak khamassi
Peer Reviewers Diomède Noukeu Njinkui
PUBLISHED 17 Nov 2025
https://doi.org/10.12688/f1000research.128483.5
Research Article metrics
Revised
Comparison of the antimicrobial reduction effect of photodynamic inactivation with the addition of chlorophyll and curcumin photosensitizer in Aggregatibacter actinomycetemcomitans and Enterococcus faecalis
[version 5; peer review: 1 approved, 3 approved with reservations]
Deny Arifianto, Suryani Dyah Astuti, Sarah Ratri Medyaz, Septia Budi Lestari, Samian Samian, Dezy Zahrotul Istiqomah Nurdin, Dita Ayu Hariyani, Yunus Susilo, Ardiansyah Syahrom
Peer Reviewers Min Wu; Shima Afrasiabi; Chenyu Jiang; Gaetano Isola
  • Funder
  • Grant Support International Collaborative Research Scheme
LATEST VERSION PUBLISHED 14 Nov 2025
https://doi.org/10.12688/f1000research.159630.3
Brief Report metrics
Revised
Expression status transition of NOTCH1 accompanies chromatin remodeling in human early retinal progenitor cells
[version 3; peer review: 2 approved with reservations]
Yoshitoku Watabe, Sakurako Kobayashi, Takahiro Nakayama, Satoru Takahashi, Masaharu Yoshihara
Peer Reviewers Mariko Kashiwagi; Zhongjie Tang
  • Funder
  • Japan Society for the Promotion of Science
LATEST VERSION PUBLISHED 14 Nov 2025
https://doi.org/10.12688/f1000research.168305.1
Software Tool Article metrics AWAITING PEER REVIEW
ggEDA: Visualisations for exploratory data analysis using tiled one-dimensional graphics and parallel coordinate plots
[version 1; peer review: awaiting peer review]
Sam El-Kamand, Julian M.W. Quinn, Mark J. Cowley
Peer Reviewers Invited
  • Funders
  • Cancer Australia
  • Australian Medical Research Future Fund (MRFF Emerging Priorities and Consumer-Driven Research Initiative)
  • Luminesce Alliance – Innovation for Children’s Health
  • My Room Children’s Cancer Charity
PUBLISHED 13 Nov 2025
https://doi.org/10.12688/f1000research.124121.4
Research Article metrics
Revised
Evaluation of antimicrobial susceptibility of Escherichia coli isolated from contaminated areas of Majengo slum in Meru County, Kenya
[version 4; peer review: 2 approved, 3 approved with reservations, 2 not approved]
Jared Ombuya, Kennedy Gachoka, Kagendo Dorothy, Naomi Mutea
Peer Reviewers Eman S. Ibrahim; Benno H Ter Kuile; Md. Abdus Sobur; Abdennaceur Hassen; Chimdi Mang Kalu; K.B.M Saiful Islam; Mulugeta Kibret
LATEST VERSION PUBLISHED 13 Nov 2025
https://doi.org/10.12688/f1000research.168193.1
Research Article metrics
Predictive Model to Evaluate Achievement of the Sustainable Development Goals in Mexico Using an Artificial Neural Network
[version 1; peer review: 1 approved]
Omar Palacios-Hernández, Ricardo Lopez-Fernandez
Peer Reviewers Kusay A. Wheib
  • Funder
  • Consejo Nacional de Humanidades, Ciencias y Tecnologías
PUBLISHED 13 Nov 2025
https://doi.org/10.12688/f1000research.170204.1
Research Article metrics
The Theory of Observational Relativity Serial Report 2: The Rest Mass of Photons is not Really Zero
[version 1; peer review: 1 approved]
Xiaogang Ruan
Peer Reviewers Wim Vegt
PUBLISHED 12 Nov 2025
https://doi.org/10.12688/f1000research.170252.2
Systematic Review metrics
Revised
Antecedents of data analytics adoption: A systematic literature review from 2018-2024
[version 2; peer review: 2 approved]
Alqa Husni, Wasanthi Madurapperuma, Ranpati Dewage Thilini Sumudu Kumari
Peer Reviewers Tarun Kumar Vashishth; Alexandra Theodoropoulou
LATEST VERSION PUBLISHED 11 Nov 2025
https://doi.org/10.12688/f1000research.158144.2
Research Article metrics
Revised
Evaluation of Pre-Extraction Knowledge and Perception of the Third Molar Extraction Procedure Among Patients in the Eastern Province, Saudi Arabia: A Cross-Sectional Study
[version 2; peer review: 1 approved with reservations, 1 not approved]
Sami Alshehri, Turki Alshehri, Hadeel AlMutiri, Abdulla Aljami, Ahmed Alsubaie, Faisal E. Aljofi, Mishali AlSharief, Manal AlSaadoun, Yasser S. Alali, Yousif A. Al-Dulaijan
Peer Reviewers Ahmed Fadhel Al-Quisi; Brender Leonan-Silva
  • Funder
  • no fund received
LATEST VERSION PUBLISHED 11 Nov 2025
https://doi.org/10.12688/f1000research.166849.2
Genome Note metrics
Revised
Reference-guided draft genome assembly of the slender walking catfish, Prophagorus nieuhofii
[version 2; peer review: 1 approved, 2 approved with reservations, 1 not approved]
Imron Imron, Fajar Anggraeni, Rahmat Hidayat, Jadmiko Darmawan, Otong Zenal Arifin, Daniel Frikli Mokodongan, Rosita Rosita, Luthfi Nurhidayat
Peer Reviewers Gulab D. Khedkar; Geoffrey C. Waldbieser; Haiyang Liu; Adauto Cardoso
  • Funder
  • Lembaga Pengelola Dana Pendidikan
LATEST VERSION PUBLISHED 10 Nov 2025
https://doi.org/10.12688/f1000research.167708.1
Systematic Review metrics
Enhancing Strategic Agility and Real Time Decision-Making in the Technology Sector: Exploring the Role of AI and e-HRM Systems
[version 1; peer review: 3 approved]
Tom Ongesa Nyamboga
Peer Reviewers Mo'men Hani Mahmoud; Nick Hadjinicolaou; Bhanumathi P
PUBLISHED 10 Nov 2025
https://doi.org/10.12688/f1000research.170106.1
Research Article metrics
Aerodynamic Performance Enhancement of Crm Nacelle Under Transonic Flow: A Comprehensive Cfd-based Optimization Approach
[version 1; peer review: 1 approved with reservations]
J K Ajay Kumar, Sudheendra Prabhu K, A S Veerendra, Sudhir Shastry Y B, Srinivas G
Peer Reviewers Andrew Ragai Henry Rigit
PUBLISHED 10 Nov 2025
https://doi.org/10.12688/f1000research.172212.1
Research Article metrics AWAITING PEER REVIEW
If We Build Them, They Will Run: Automated HPC Apps Deployment and Profiling with eBPF in Cloud
[version 1; peer review: awaiting peer review]
Vanessa Sochat, Daniel Milroy
Peer Reviewers Invited
PUBLISHED 10 Nov 2025
https://doi.org/10.12688/f1000research.165281.1
Software Tool Article metrics
DataMap: A Browser-based App for Visualizing High-Dimensional Data
[version 1; peer review: 1 approved with reservations]
Xijin Ge
Peer Reviewers Guangchuang Yu
  • Funders
  • National Institute of General Medical Sciences
  • National Human Genome Research Institute
PUBLISHED 10 Nov 2025
https://doi.org/10.12688/f1000research.170665.1
Software Tool Article metrics
Sixth Annual BCM Hackathon on Structural Variation and Pangenomics
[version 1; peer review: 2 approved with reservations]
Farhang Jaryani, Bishnu Adhikar, Shaghayegh Beheshti, Sarah Fross, Jędrzej Kubica, Jen-Yu Wang, Aanuoluwa Adekoya, Daniel P. Agustinho, Oluwaseun Akinsulire, Francesco Andreace, Abolhassan Bahari, Christian Brueffer, Siyuan Cheng, Jonah Cullen, Kristen Curry, Ryan Doughty, Adam English, Neda Ghohabi Esfahani, Natali Gulbahce, Tina Han, Nha Van Huynh, Michal Izydorczyk, Minal Jamsandekar, Emrah Kacar, Arthur Shem Kasambula, Rupesh K. Kesharwani, Divya Kalra, Shwetha V Kumar, Iva Kotásková, Callum MacPhillamy, Sina Majidian, Mauricio Moldes, Abraham (Jon) Moller, Rajarshi Mondal, Eleni Mourouzidou, Michael Nute, Dmitrii Olisov, Anika Pallapothu, Meghana Ram, Marcus Chan Hua Rui, Philippe Sanio, Russel T. Santos, Michael Olufemi, Narges SangaraniPour, Moustafa Shokrof, Sam Stroupe, Gobikrishnan Subramaniam, Todd J. Treangen, Pankhuri Wanjari, Umran Yaman, Farha zain, Xinchang Zheng, Fritz J Sedlazeck, Ben Busby
Peer Reviewers Istvan Albert; Colin Diesh
  • Funders
  • Shwetha V Kumar is supported by CPRIT grant #RP210037 (PI Aaron Thrift)
  • Ryan Doughty is supported by a training fellowship from the Gulf Coast Consortia, on the NLM Training Program in Biomedical Informatics & Data Science (T15LM007093)
  • Sarah Fross is supported by a training grant from the National Institutes of Health under Award Number 5T32GM135748-04.
  • Sedlazeck NIH grant: 1UG3NS132105-01, 1U01HG011758-01
  • Jędrzej Kubica is supported by the Ministry of Science and Higher Education (Poland) as a project under the program Excellence Initiative – Research University (2020–2026) (decision no.: IV.2.3./30/2024) and the France 2030 state funding managed by the National Research Agency with the reference
  • Shaghayegh Beheshti is supported by a training grant from the National Institutes of Health under Award Number 5T32GM139534-04 and NHGRI U01 HG011758.
  • The research was supported by Cancer Prevention and Research Institute of Texas under grant number: #RP210037
PUBLISHED 07 Nov 2025
https://doi.org/10.12688/f1000research.171593.1
Research Article metrics AWAITING PEER REVIEW
Analysis of skin mycobiota associated with alopecia in captive cynomolgus macaques (Macaca fascicularis) based on Oxford Nanopore Technologies
[version 1; peer review: awaiting peer review]
Natthanit Phokkhasub, Suthida Visedthorn, Pavit Klomkliew, Prangwalai Chanchaem, Kittima Phutthawong, Taratorn Kemthong, Vorthon Sawaswong, Ariya Khamwut, Suchinda Malaivijitnond, Sunchai Payungporn
Peer Reviewers Invited
  • Funders
  • The 90th Anniversary of Chulalongkorn University Ratchadaphiseksomphot Fund
  • The National Research Council of Thailand (NRCT)
PUBLISHED 07 Nov 2025
https://doi.org/10.12688/f1000research.166678.2
Research Article metrics
Revised
Exploring the Potential of Peptides Derived from the Coelomic Fluid of Echinometra lucunter Targeting Inflammatory Cytokines in Placental Syndromes: In Silico Study
[version 2; peer review: 2 approved]
Defrin Defrin, Arif Birru, Kevin Cuandra, Ratna Puspita, I Widnyana, Nasya Aqilah, Arzita Fadhilla, Winka Suwardjo, Amanda Amalia, Kalaj Haq, Tirza Amaris, Feroz Aldino, Shabrina Ekitasari, Bernice Sirait, Nathania Kristaningtyas, Rizka Wilanda, Made Ananda
Peer Reviewers Aldi Tamara Rahman; Norbertus Marcell Prayogi
LATEST VERSION PUBLISHED 06 Nov 2025
https://doi.org/10.12688/f1000research.171123.1
Research Article metrics
Identification of Pathogenic PKHD1 Variants in Infants with Autosomal Recessive Polycystic Kidney Disease from the Dhofar Region, Oman
[version 1; peer review: 2 approved]
Intisar Al Alawi, Maha Al Awadi, Fatma Al Awaid, Joshua Pillai, Matthew Sampson, Juliana E. Arcila Galvis, Ashwaq Al Maimani, Zainab Al Hashmi, John A. Sayer
Peer Reviewers Hana Yang; Consolato M Sergi
  • Funders
  • Kidney Research UK
  • LifeArc
  • Horizon Europe
  • Medical Research Council
PUBLISHED 05 Nov 2025
181-200 of 5,602 ARTICLES
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