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https://doi.org/10.12688/f1000research.123550.3
Research Article metrics
Revised
New findings on ligand series used as SARS-CoV-2 virus inhibitors within the frameworks of molecular docking, molecular quantum similarity and chemical reactivity indices
[version 3; peer review: 1 approved, 4 approved with reservations]
Alejandro Morales-Bayuelo, Jesús Sánchez-Márquez
Peer Reviewers Truong Tan Trung; Yogesh Kumar; M. Aravinthraj Aravinthraj; Emmanuel Kitete Mulongo; Naveen Shivalingegowda
  • Funder
  • UNISINU-2022-2
LATEST VERSION PUBLISHED 11 Dec 2023
https://doi.org/10.12688/f1000research.140883.1
Research Article metrics
Plackett-Burman design in the biosynthesis of silver nanoparticles with Mutisia acuminatta (Chinchircoma) and preliminary evaluation of its antibacterial activity
[version 1; peer review: 1 approved, 2 approved with reservations]
Luis A. Laime-Oviedo, Carlos A. Arenas-Chávez, Jaime A. Yáñez, Corina A. Vera-Gonzáles
Peer Reviewers Samson O Aisida; Amr Mohamed Abdelghany; MubarakAli Davoodbasha
  • Funder
  • Universidad Nacional de San Agustin de Arequipa
PUBLISHED 13 Nov 2023
https://doi.org/10.12688/f1000research.140568.1
Research Article metrics
High-throughput virtual screening approach and dynamic simulation of natural compounds as target inhibitors of BACE1 in Alzheimer's disease
[version 1; peer review: 1 approved with reservations, 1 not approved]
Fadoua Elkamili, Abderrahim Ait Ouchaoui, Leandro L. Lorente-Leyva, Diego Hernán Peluffo-Ordóñez
Peer Reviewers Luis Humberto Mendoza-Huizar; Atiya Akhtar
PUBLISHED 23 Oct 2023
https://doi.org/10.12688/f1000research.141719.1
Editorial metrics NOT PEER REVIEWED
YCharOS open antibody characterisation data: Lessons learned and progress made
[version 1; peer review: not peer reviewed]
Michael S. Biddle, Harvinder S. Virk
  • Funders
  • Medical Research Council
  • Leicester Institute of Advanced Studies
PUBLISHED 16 Oct 2023
https://doi.org/10.12688/f1000research.73561.3
Research Article metrics
Revised
Effect of cogon grass root ethanol extract on fatty acid binding protein 4 and oxidative stress markers in a sepsis mouse model
[version 3; peer review: 1 approved, 2 approved with reservations]
Mirasari Putri, Bening Mauliddina Rastiarsa, Raden Aliya T. M. Djajanagara, Ghaliby Ardhia Ramli, Neni Anggraeni, Nugraha Sutadipura, Nur Atik, Mas Rizky A. A. Syamsunarno
Peer Reviewers Katrin Roosita; Ming Zhong; Patipark Kueanjinda
  • Funder
  • Ministry of Education, Culture, Research, and Technology of Indonesia.
LATEST VERSION PUBLISHED 03 Oct 2023
https://doi.org/10.12688/f1000research.133899.3
Data Note metrics
Revised
Identification of high-performing antibodies for Apolipoprotein E for use in Western Blot and immunoprecipitation
[version 3; peer review: 1 approved, 2 approved with reservations]
Riham Ayoubi, Kathleen Southern, Carl Laflamme, NeuroSGC/YCharOS collaborative group
Peer Reviewers Leonard Kritharides and Maaike Kockx; Nathalie Macrez; Valerio Leoni
  • Funders
  • Bristol-Myers Squibb
  • National Institute of Aging
  • Takeda
  • Pfizer
  • Genome Quebec
  • Ontario Genomics
  • Genentech
  • Bayer AG
  • Boehringer Ingelheim
  • Merck KGaA
  • EUbOPEN
  • Mitacs
  • Ontario Genomics Institute
  • Janssen Pharmaceuticals
LATEST VERSION PUBLISHED 29 Sep 2023
https://doi.org/10.12688/f1000research.134658.1
Research Article metrics
Immunoinformatics design of B-cell multi-epitope peptide for the diagnosis of Methicillin Resistant Staphylococcus aureus (MRSA) infection
[version 1; peer review: 1 approved]
Simeon Kayowa Olatunde, Joshua Babatunde Owolabi, Bolaji Oluwabusayo Ayinde, Shauna Angella Ebanks, Edla Sophia Vidale, Elijah Kolawole Oladipo, Yakubu Adekunle Alli, Enoch Oluwalonimi Adewara
Peer Reviewers Potukuchi Venkata Gurunadha Krishna Sarma
PUBLISHED 18 Sep 2023
https://doi.org/10.12688/f1000research.125945.2
Review metrics
Revised
Pathomechanisms Of Non-Coding RNAs, Hub Genes, and Lifestyle Related To The Oxidative Stress In Type 2 Diabetes And Cardiac Complications.
[version 2; peer review: 1 approved, 1 not approved]
Fatemeh Hajibabaie, Faranak Aali, Navid Abedpoor
Peer Reviewers Gladys Ko; Yi Song
LATEST VERSION PUBLISHED 13 Sep 2023
https://doi.org/10.12688/f1000research.128320.3
Research Article metrics
Revised
Concatenated 16S rRNA sequence analysis improves bacterial taxonomy
[version 3; peer review: 2 approved]
Bobby Paul
Peer Reviewers Siddaramappa Shivakumara; Wellyzar Sjamsuridzal
  • Funder
  • Manipal Academy of Higher Education
LATEST VERSION PUBLISHED 01 Sep 2023
https://doi.org/10.12688/f1000research.125351.2
Research Article metrics
Revised
Circadian clock control of tRNA synthetases in Neurospora crassa
[version 2; peer review: 2 approved]
Kathrina D. Castillo, Emily D. Chapa, Teresa M. Lamb, Madhusree Gangopadhyay, Deborah Bell-Pedersen
Peer Reviewers Ruifeng Cao; Luis F. Larrondo
  • Funders
  • National Institute of General Medical Sciences
  • Arnold and Mabel Beckman Foundation
LATEST VERSION PUBLISHED 17 Aug 2023
https://doi.org/10.12688/f1000research.132516.2
Study Protocol metrics
Revised
Immunoexpression of E-cadherin in oral potentially malignant disorders, oral squamous cell carcinoma and its correlation with clinicopathological parameters
[version 2; peer review: 1 approved, 1 not approved]
Padmashri Kalmegh, Alka Hande, Madhuri Gawande, Swati Patil, Archana Sonone, Aayushi Pakhale
Peer Reviewers Reetoja Nag; Sankar Jagadeeshan
LATEST VERSION PUBLISHED 28 Jul 2023
https://doi.org/10.12688/f1000research.134510.1
Study Protocol metrics AWAITING PEER REVIEW
Protocol for evaluation and correlation of CD44 immunoexpression in tumor tissue and surgical margins of oral squamous cell carcinoma with three-year survival: A retrospective study
[version 1; peer review: awaiting peer review]
Husna Tehzeeb, Madhuri Gawande, Alka Hande, Swati Patil, Archana Sonone, Aayushi Pakhale
Peer Reviewers Invited
PUBLISHED 03 Jul 2023
https://doi.org/10.12688/f1000research.131413.1
Review metrics
Molecular technologies ending with ‘omics’: The driving force toward sustainable plant production and protection
[version 1; peer review: 1 approved with reservations, 1 not approved]
Tshegofatso Dikobe, Kedibone Masenya, Madira C Manganyi
Peer Reviewers Phetole Mangena; Flavia Vischi Winck
PUBLISHED 10 May 2023
https://doi.org/10.12688/f1000research.125332.3
Research Article metrics
Revised
Ex vivo comparative investigation of suprachiasmatic nucleus excitotoxic resiliency
[version 3; peer review: 2 approved, 1 approved with reservations]
Debalina Acharyya, Joanna Cooper, Rebecca A. Prosser
Peer Reviewers Luz Navarro; Malgorzata Beresewicz-Haller; Tak Pan Wong
  • Funder
  • University of Tennessee Knoxville
LATEST VERSION PUBLISHED 26 Apr 2023
https://doi.org/10.12688/f1000research.129668.2
Research Article metrics
Revised
Increased growth temperature and vitamin B12 supplementation reduces the lag time for rapid pathogen identification in BHI agar and blood cultures
[version 2; peer review: 2 approved]
Jawad Ali, Mukund Joshi, Asal Ahmadi, Knut Olav Strætkvern, Rafi Ahmad
Peer Reviewers Sarita Mohapatra; Rashid Nazir
  • Funder
  • Inland Norway University of Applied Sceinces
LATEST VERSION PUBLISHED 03 Apr 2023
https://doi.org/10.12688/f1000research.131851.1
Data Note metrics
The identification of high-preforming antibodies for Ubiquilin-2 for use in Western Blot, immunoprecipitation, and immunofluorescence
[version 1; peer review: 2 approved]
Ian McDowell, Riham Ayoubi, Maryam Fotouhi, Kathleen Southern, Peter S. McPherson, Carl Laflamme, NeuroSGC/YCharOS/EDDU collaborative group, ABIF Consortium
Peer Reviewers Mervyn Monteiro; Carlos Castaneda
  • Funders
  • Ontario Genomics
  • ALS Society of Canada
  • ALS Association
  • Motor Neurone Disease Association
  • Genome Quebec
  • Mitacs
  • Genome Canada
  • Canadian Institutes of Health Research
PUBLISHED 30 Mar 2023
https://doi.org/10.12688/f1000research.132249.1
Data Note metrics
The identification of high-performing antibodies for Profilin-1 for use in Western blot, immunoprecipitation and immunofluorescence
[version 1; peer review: 1 approved, 2 approved with reservations]
Riham Ayoubi, Ian McDowell, Maryam Fotouhi, Kathleen Southern, Peter S. McPherson, Carl Laflamme, NeuroSGC/YCharOS/EDDU collaborative group, ABIF Consortium
Peer Reviewers Partha Roy; Jieya Shao; Xiaoyan Du
  • Funders
  • Ontario Genomics
  • ALS Society of Canada
  • Canadian Institutes of Health Research Foundation
  • ALS Association
  • Motor Neurone Disease Association
  • Mitacs
  • Genome Quebec
  • Genome Canada
PUBLISHED 29 Mar 2023
https://doi.org/10.12688/f1000research.126096.1
Research Article metrics
Comparison of BiP and HSP70i as markers of unfolded protein response (UPR) in segmental and nonsegmental vitiligo
[version 1; peer review: 2 approved with reservations]
Boedhy Setyanto, Handono Kalim, Sri Poeranto, Dhelya Widasmara
Peer Reviewers Mitesh Dwivedi; Shintaro Inoue
PUBLISHED 28 Mar 2023
https://doi.org/10.12688/f1000research.131333.1
Data Note metrics
The identification of high-performing antibodies for transmembrane protein 106B (TMEM106B) for use in Western blot, immunoprecipitation, and immunofluorescence
[version 1; peer review: 1 approved, 2 approved with reservations]
Riham Ayoubi, Maryam Fotouhi, Kathleen Southern, Ritika Bhajiawala, Rebeka Fanti, Panagiotis Prinos, Peter S. McPherson, Carl Laflamme, NeuroSGC/YCharOS/EDDU collaborative group, ABIF Consortium
Peer Reviewers Dawn Smallwood; Christian Peter Moritz; Giuseppe Legname
  • Funders
  • Ontario Genomics
  • Canadian Institutes of Health Research Foundation
  • ALS Canada
  • ALS Association
  • Motor Neurone Disease Association
  • Genome Quebec
  • Mitacs
  • Genome Canada
PUBLISHED 21 Mar 2023
https://doi.org/10.12688/f1000research.128537.1
Research Article metrics
Association between mutant E6 and E7 Human Papilloma Virus Type 16 oncogenes with cyclin D1 expression in cervical cancer: Observational study in Bali
[version 1; peer review: 1 approved with reservations, 2 not approved]
I Nyoman Bayu Mahendra, I Nyoman Gede Budiana, I Gede Mega Putra, Anom Suardika, Anak Agung Gede Putra Wiradnyana, Alisza Novrita Sari
Peer Reviewers Jacyara Macedo; Eric Siegel; Atar Singh Kushwah
PUBLISHED 09 Mar 2023
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