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 in 
https://doi.org/10.12688/f1000research.171282.1
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’Spanscriptomics’: towards bioinformatics training materials in Spanish.
[version 1; peer review: 2 approved with reservations]
Jurgi Giraud, Stefana Dreptate, Wendi Bacon, The Galaxy Community
Peer Reviewers Carlos C. Goller; Wei Ruan
  • Funder
  • Company of Biologists
PUBLISHED 20 Oct 2025
https://doi.org/10.12688/f1000research.131600.2
Genome Note metrics
Revised
The complete mitochondrial genome Hainan Gymnure, Neohylomys hainanensis
[version 2; peer review: 3 approved]
Feiyun Tu, Xiaodan Hou, Qiujie Lu, Xiaofei Zhai
Peer Reviewers Michael Allen; Perinçek Seçkinozan Şeker; Kai He
  • Funder
  • Natural Science Foundation of Hainan Province
LATEST VERSION PUBLISHED 20 Oct 2025
https://doi.org/10.12688/f1000research.170090.1
Review metrics
Mechanisms Associated with PINK1 Mutations in Parkinson's Disease
[version 1; peer review: 1 approved, 1 not approved]
Hanliang Dan, Xiaohui Huang, Zheng Liu, Bing Wei, Maslinda Musa
Peer Reviewers Eman Ezzeldien Mohamed; Ryan L Davis
PUBLISHED 20 Oct 2025
https://doi.org/10.12688/f1000research.169966.1
Data Note metrics
A guide to selecting high-performing antibodies for Optineurin (UniProt ID: Q96CV9) for use in western blot, immunoprecipitation, and immunofluorescence
[version 1; peer review: 1 approved]
Vera Ruíz Moleón, Riham Ayoubi, Charles Alende, Maryam Fothouhi, Joel Ryan, Sara González Bolívar, Donovan Worrall, Thomas M Durcan, Claire M Brown, Vincent Francis, Peter S McPherson, Carl Laflamme
Peer Reviewers Deborah Moshinsky
  • Funders
  • ALS Society of Canada
  • ALS Association
  • Motor Neurone Disease Association
  • Québec Consortium for Drug Discovery
PUBLISHED 17 Oct 2025
https://doi.org/10.12688/f1000research.167964.1
Case Study metrics
Sneezing in response to naturalistic bright light exposure
[version 1; peer review: 2 approved with reservations]
Lucien Bickerstaff, Josef Trinkl, Stephan Munkwitz, Manuel Spitschan
Peer Reviewers Arnold Wilkins; Zacharias Kalentakis
  • Funder
  • Max-Planck-Gesellschaft
PUBLISHED 17 Oct 2025
https://doi.org/10.12688/f1000research.129581.2
Software Tool Article metrics
Revised
AmpSeqR: an R package for amplicon deep sequencing data analysis
[version 2; peer review: 3 approved]
Jiru Han, Jacob E. Munro, Melanie Bahlo
Peer Reviewers Eduardo Castro-Nallar; Cristian Koepfli and Gustavo Da Silva; Patrick Murigu Kamau Njage
  • Funders
  • Institute Infrastructure Support Scheme (IRIISS)
  • National Health and Medical Research Council
LATEST VERSION PUBLISHED 17 Oct 2025
https://doi.org/10.12688/f1000research.160416.3
Research Article metrics
Revised
Ginkgo Biloba as a niche theme cognitive enhancer agent, 1420 dokumen of Scopus database. A bibliometric study from 1988 to 2024
[version 3; peer review: 2 approved]
ARMAN YURISALDI SALEH, Dwi Arwandi Yogi Saputra, Riezky Valentina, Tirta Darmawan Susanto
Peer Reviewers tasawar iqbal; Arne Reimers
LATEST VERSION PUBLISHED 15 Oct 2025
https://doi.org/10.12688/f1000research.154021.2
Research Article metrics
Revised
Alpha-guaiene isolated from patchouli oil exhibits antifungal activity against four pathogenic fungi
[version 2; peer review: 2 approved, 1 approved with reservations]
Sarifah Nurjanah, Zhaqqu Alhafidz, Maghfira Maulani, Tita Rialita, Elazmanawati Lembong
Peer Reviewers Irmanida Batubara; Harlinda Kuspradini; Lal R.K
  • Funder
  • Universitas Padjadjaran-RKDU
LATEST VERSION PUBLISHED 13 Oct 2025
https://doi.org/10.12688/f1000research.168556.1
Research Article metrics
Single-cell RNA sequencing of cerebrospinal fluid reveals the expansion of innate lymphoid cells with upregulated transposable elements in multiple sclerosis
[version 1; peer review: 2 not approved]
Pouria Mosaddeghi, Mitra Farahmandnejad, Mohammad M. Zarshenas
Peer Reviewers Raquel Garza; Patricia A. Thibault
  • Funder
  • Shiraz University of Medical Sciences
PUBLISHED 10 Oct 2025
https://doi.org/10.12688/f1000research.125877.3
Research Article metrics
Revised
General anaesthetics reduce acute lymphoblastic leukaemia malignancies in vitro and in vivo via CXCR4 and osteopontin mediated mechanisms
[version 3; peer review: 1 approved, 2 approved with reservations]
Cui Jiang, Sara Gonzalez-Anton, Xiaomeng Li, Emma Mi, Lingzhi Wu, Hailin Zhao, Ge Zhang, Aiping Lu, Cristina Lo Celso, Daqing Ma
Peer Reviewers Koichi Yuki; Paul M Maciocia and Jongwon Yoon; Victor H. Villar Cortes
  • Funders
  • Cancer Research UK
  • UK and European Research Council
  • Royal College of Anaesthetists
LATEST VERSION PUBLISHED 09 Oct 2025
https://doi.org/10.12688/f1000research.169383.1
Research Article metrics
Effect of combined hurdle technology treatments on the quality characteristics of minimally processed pitahaya 
[version 1; peer review: 1 approved with reservations]
Nicodemo Jamanca-Gonzales, Robert Ocrospoma-Dueñas, Eulalia Vargas-Tapia, Yolanda Eguilas-Caushi, Thalia A. Rivera-Ashqui, Reynaldo J. Silva-Paz
Peer Reviewers César R. Balcázar-Zumaeta
  • Funder
  • Universidad Nacional de Barranca
PUBLISHED 08 Oct 2025
https://doi.org/10.12688/f1000research.145171.3
Research Article metrics
Revised
Tumor-driven stromal reprogramming in the pre-metastatic lymph node
[version 3; peer review: 2 approved]
Michelle Piquet, David A Ruddy, Viviana Cremasco, Jonathan Chang
Peer Reviewers Sanjiv Luther; Christopher McGinnis
LATEST VERSION PUBLISHED 07 Oct 2025
https://doi.org/10.12688/f1000research.166306.2
Research Article metrics
Revised
Peripheral Blood Expression of MMPs and DNA Methylation-Related Genes in Women with Recurrent Spontaneous Abortion: A Case-Control Study
[version 2; peer review: 2 approved]
Maryam Imani, Fateme Zare, Hossein Hadinedoushan, Fateme Rahmani, Farzaneh Fesahat
Peer Reviewers Noor Nihad Baqer; Nafisa Huseni Balasinor
LATEST VERSION PUBLISHED 06 Oct 2025
https://doi.org/10.12688/f1000research.163212.2
Data Note metrics
Revised
CD4+ T-cell transcription factors as early predictors of phenoconversion in idiopathic rapid eye movement sleep behaviour disorder
[version 2; peer review: 2 approved]
Monica Pinoli, Michele Terzaghi, Franca Marino, Cristoforo Comi, Maurizio Versino, Marco Cosentino
Peer Reviewers Tommaso Schirinzi; Adawiya J. Haider
LATEST VERSION PUBLISHED 06 Oct 2025
https://doi.org/10.12688/f1000research.166549.1
Research Article metrics
Utilizing anatomical information for signal detection in functional magnetic resonance imaging
[version 1; peer review: 2 approved with reservations, 1 not approved]
Norman Peitek, André Brechmann, Karsten Tabelow, Thorsten Dickhaus
Peer Reviewers Benedikt Sundermann; Fabricio Cravo and Stephanie Noble; Qiran Jia
  • Funder
  • Deutsche Forschungsgemeinschaft
PUBLISHED 01 Oct 2025
https://doi.org/10.12688/f1000research.169799.1
Research Article metrics
Shining Light into Adolescent HIV Neuroplasticity: A Study of the Prefrontal Cortex Using Functional Near Infrared Spectrometry
[version 1; peer review: 3 approved with reservations]
Sizwe Zondo, Kate Cockcroft, Candida da Silva Ferreira Barreto, Aline Ferreira Correia
Peer Reviewers Nerrolyn Ramstrand; Kaylee Van Wyhe; Taylor Fitzpatrick-Schmidt
  • Funders
  • University of the Witwatersrand, Johannesburg
  • Rhodes University
  • National Research Foundation
PUBLISHED 29 Sep 2025
https://doi.org/10.12688/f1000research.129075.5
Research Article metrics
Revised
Investigation of wine fermentation of three-leaf cayratia (Cayratia trifolia L.) using Saccharomyces cerevisiae 2.1
[version 5; peer review: 2 approved, 2 not approved]
Doan Thi Kieu Tien, Le Doan Quoc Binh, Huynh Thi Ngoc Mi, Nguyen Ngoc Thanh, Bui Hoang Dang Long, Ngo Thi Phuong Dung, Ha Thanh Toan, Huynh Xuan Phong
Peer Reviewers Javier Alonso-Del-Real; Susan Abdul Raheem Hasan and Muazaz Azeez Hasan AL-Hadeethi; Shatha Abdullah Allaith; Nguyen Khoi Hong Nguyen
LATEST VERSION PUBLISHED 23 Sep 2025
https://doi.org/10.12688/f1000research.166417.2
Research Article metrics
Registered report
Revised
Stage 2 Registered Report: Refinement of tickling protocols to improve positive animal welfare in laboratory rats
[version 2; peer review: 2 approved]
Vincent Bombail, Sarah M Brown, Cammy Beyts, Jessica E Martin, Tianhao Li, Simone L Meddle, Michael Mendl, Emma SJ Robinson, Tayla J Hammond, Birte L Nielsen, Megan R LaFollette, Ignacio Vinuela-Fernandez, Emma KL Tivey, Alistair B Lawrence
Peer Reviewers Sergio Pellis; Carla Forte Maiolino Molento
  • Funder
  • NC3Rs
LATEST VERSION PUBLISHED 23 Sep 2025
https://doi.org/10.12688/f1000research.169688.1
Research Article metrics AWAITING PEER REVIEW
Montelukast altered BDNF and CHRNA7 gene expression were associated with behavioral changes in rats.
[version 1; peer review: awaiting peer review]
Karar Haider, Yassir Mustafa Kamal Al Mulla Hummadi, Rihab Muhamad Guaim, Mutaz Ahmeid
Peer Reviewers Invited
PUBLISHED 22 Sep 2025
https://doi.org/10.12688/f1000research.127413.2
Research Article metrics
Revised
Effect of ACTH4-10Pro8-Gly9-Pro10 on anti-inflammatory cytokine (IL-4, IL-10, IL-13) expression in acute spinal cord injury models (male Sprague Dawley rats)
[version 2; peer review: 2 approved, 1 not approved]
Asadullah Asadullah, Abdul Hafid Bajamal, Muhammad Arifin Parenrengi, Agus Turchan, Budi Utomo, I Ketut Sudiana, Eko Agus Subagio
Peer Reviewers Mawaddah Ar Rochmah; Cafer Ikbal Gulsever; Xue Yao
LATEST VERSION PUBLISHED 22 Sep 2025
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