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https://doi.org/10.12688/f1000research.161076.1
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ShinyCellPlus: an improved ShinyCell application for the interactive visualization of single cell dat
[version 1; peer review: 2 approved with reservations]
Drew Moore, Bryan Granger, Stefano Berto
Peer Reviewers Valdemaras Petrošius; Pierre-Luc Germain
  • Funder
  • National Institute of General Medical Sciences
PUBLISHED 27 Mar 2025
https://doi.org/10.12688/f1000research.152800.3
Research Article metrics
Revised
The effect of soaking heat-polymerized acrylic resin denture base in avocado seed extract (Persea americana Mill.) on the inhibition of denture-plaque microorganisms biofilm growth
[version 3; peer review: 2 approved, 2 approved with reservations, 1 not approved]
Thalia Angela, Siti Wahyuni, Susanna Halim
Peer Reviewers Nada Z. Mohammed and Suhad M. Hamdoon; Mervat E. Abd-Ellah; Prabha S Newaskar; Norlela Yacob; Veena Hegde
LATEST VERSION PUBLISHED 25 Mar 2025
https://doi.org/10.12688/f1000research.162501.1
Research Article metrics
Identification and Functional Characterization of microRNAs in Ichthyosporea
[version 1; peer review: 1 approved with reservations]
Hengyi Zhu, Jon Bråte
Peer Reviewers Maxwell C Coyle
  • Funder
  • Norges Forskningsråd
PUBLISHED 24 Mar 2025
https://doi.org/10.12688/f1000research.158856.1
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Whole Genome Characterization of Potential Isolates for Next-Generation SARS-CoV-2 Vaccine Development Utilizing Structural Protein of Multiple Variants
[version 1; peer review: 1 approved with reservations]
Diyantoro Diyantoro, Fedik Abdul Rantam, Juniastuti Juniastuti, Andy Yasmin Wijaya, Helen Susilowati, Suryo Kuncorojakti, Ahmad Aswin, Firdausy Kurnia Maulana
Peer Reviewers Kanwal Khalid
  • Funder
  • Education Funding Institution (LPDP) and the Education Funding Service Center (BPPT)
PUBLISHED 21 Mar 2025
https://doi.org/10.12688/f1000research.162353.1
Research Article metrics
Optimizing Cardiovascular Treatment in Non-Small Cell Lung Cancer: A Comprehensive Computational Approach for Assessment of Drug-Drug Interactions between Tyrosine Kinase Inhibitors and Cardiovascular Drugs
[version 1; peer review: 1 approved, 1 approved with reservations]
Prajakta Patil, Mrunal Desai, Gayathri Baburaj, Levin Thomas, Viswam Subeesh, Sumit Birangal, Mahadev Rao, Gurupur Gautham Shenoy, Jagadish P. C.
Peer Reviewers Fahrul Nurkolis; Uday Venkat Mateti
PUBLISHED 19 Mar 2025
https://doi.org/10.12688/f1000research.155657.2
Research Article metrics
Revised
Molecular docking and MD simulation approach to identify potential phytochemical lead molecule against triple negative breast cancer
[version 2; peer review: 1 approved, 2 approved with reservations]
Pranaya Sankaranarayanan, Dicky John Davis G, Abhinand PA, M Manikandan, Arabinda Ghosh
Peer Reviewers Shiek S S J Ahmed; Yutian Zou; Indiraleka Muthiah
  • Funder
  • Sri Ramachandra Institute of Higher Education and Research (Deemed to be University)
LATEST VERSION PUBLISHED 18 Mar 2025
https://doi.org/10.12688/f1000research.161956.1
Review metrics
Assessing toxicological risk of nanoplastics contaminants in food and feed from ingestion pathway to human diseases
[version 1; peer review: 4 approved with reservations]
Pipin Agnesia, Yan Erisma Gangga, Renata Adaranyssa Egistha Putri, Flafiani Cios Conara, Andhika Puspito Nugroho
Peer Reviewers Damià Barceló; Md. Iftakharul Muhib; Kishor Kumar Maharjan; Ashish Kapoor and Anjali Awasthi
  • Funder
  • Lembaga Pengelola Dana Pendidikan
PUBLISHED 12 Mar 2025
https://doi.org/10.12688/f1000research.157380.2
Study Protocol metrics
Revised
Carbapenem-resistant Enterobacterales (CRE) in Indonesia: protocol for systematic review and meta-analysis
[version 2; peer review: 2 approved]
Ika N. Kadariswantiningsih, Maulana A. Empitu, Bulat Idrisov, Derren David Christian Homenta Rampengan, Roy Novri Ramadhan
Peer Reviewers Oznur Caliskan-Aydogan; Ingrid Maribel Leon Moreno and Harvey Morgan Scott
LATEST VERSION PUBLISHED 10 Mar 2025
https://doi.org/10.12688/f1000research.143928.3
Data Note metrics
Revised
A guide to selecting high-performing antibodies for Rab1A and Rab1B for use in Western Blot, immunoprecipitation and immunofluorescence
[version 3; peer review: 2 approved]
Vera Ruíz Moleón, Charles Alende, Maryam Fotouhi, Riham Ayoubi, Sara González Bolívar, Kathleen Southern, Peter S. McPherson, Carl Laflamme, NeuroSGC/YCharOS/EDDU collaborative group, ABIF consortium
Peer Reviewers Shinsuke Niwa; Claudia Fallini
  • Funders
  • Ontario Genomics
  • Canadian Institutes of Health Research Foundation
  • Mitacs
  • Genome Québec
  • Genome Canada
LATEST VERSION PUBLISHED 07 Mar 2025
https://doi.org/10.12688/f1000research.150975.3
Research Article metrics
Revised
Analyzing Molecular Traits of H9N2 Avian Influenza Virus Isolated from a Same Poultry Farm in West Java Province, Indonesia, in 2017 and 2023
[version 3; peer review: 1 approved, 2 approved with reservations]
Muhammad Ade Putra, Amin Soebandrio, I Wayan Teguh Wibawan, Christian Marco Hadi Nugroho Nugroho, Ryan Septa Kurnia, Otto Sahat Martua Silaen, Rifky Rizkiantino, Agustin Indrawati, Okti Nadia Poetri, Desak Gede Budi Krisnamurti
Peer Reviewers Amany Adel; Mark Zanin and Hui Lei; Albert Perlas
  • Funder
  • Universitas Indonesia, PUTI Grant
LATEST VERSION PUBLISHED 05 Mar 2025
https://doi.org/10.12688/f1000research.151963.2
Study Protocol metrics
Revised
Protocol for a pilot clinical trial of the senolytic drug combination Dasatinib Plus Quercetin to mitigate age-related health and cognitive decline in mental disorders
[version 2; peer review: 1 approved, 2 approved with reservations]
Abigail Schweiger, Breno Diniz, Ginger Nicol, Julie Schweiger, Andes E. Dasklakis-Perez, Eric J Lenze
Peer Reviewers Amer Burhan; Pierfelice Cutrufelli; Wan-Ping Lee
  • Funder
  • The Foundation for Barnes-Jewish Hospital
LATEST VERSION PUBLISHED 05 Mar 2025
https://doi.org/10.12688/f1000research.160617.1
Software Tool Article metrics
Abstract Sifter version 8: Focus on the chemical literature
[version 1; peer review: 1 approved with reservations]
Nancy C. Baker, Thomas B. Knudsen, Antony J. Williams
Peer Reviewers Hunter N B Moseley
  • Funder
  • U.S. Environmental Protection Agency
PUBLISHED 04 Mar 2025
https://doi.org/10.12688/f1000research.155204.2
Software Tool Article metrics
Revised
A streamlined workflow for long-read DNA methylation analysis with NanoMethViz and Bioconductor
[version 2; peer review: 2 approved]
Shian Su, Lucinda Xiao, James Lancaster, Tamara Cameron, Kelsey Breslin, Peter F. Hickey, Marnie E. Blewitt, Quentin Gouil, Matthew E. Ritchie
Peer Reviewers Keegan Korthauer; Tim Triche Jr
  • Funders
  • National Health and Medical Research Council
  • Medical Research Future Fund
LATEST VERSION PUBLISHED 24 Feb 2025
https://doi.org/10.12688/f1000research.145024.2
Review metrics
Revised
Effect of Black Cumin (Nigella sativa) on Prostate Health: Narrative Review
[version 2; peer review: 4 approved with reservations]
Meshari A. Alzahrani, Ibrahim Abunohaiah, Yousuf Altuwaijry, Muath Alahmadi, Osama Qasim, Abdulaziz Alzahrani, Shamshad Begum Loni, Mohammed Shareef, Raed Almannie, Saleh Binsaleh
Peer Reviewers Rodney Hull; Ümit Erdoğan; Abdullah Bamosa; Nermeen Z Abuelezz
LATEST VERSION PUBLISHED 21 Feb 2025
https://doi.org/10.12688/f1000research.154058.2
Research Article metrics
Revised
All-cause mortality according to COVID-19 vaccination status: An analysis of the UK office for National statistics public data
[version 2; peer review: 2 approved]
Marco Alessandria, Giovanni Malatesta, Giovanni Di Palmo, Marco Cosentino, Alberto Donzelli
Peer Reviewers Jarle Aarstad; Stefan Pilz
LATEST VERSION PUBLISHED 20 Feb 2025
https://doi.org/10.12688/f1000research.155856.3
Case Report metrics
Revised
Case Report: Hymenolepis diminuta in an asymptomatic Ecuadorian child.
[version 3; peer review: 1 approved, 2 approved with reservations]
Zulbey Rivero de Rodriguez, Ader Ponce, Anthony Vera, Angela Bracho, Anita Murillo
Peer Reviewers Yukifumi Nawa; Adriana Esteves; Amal Sm Sayed
LATEST VERSION PUBLISHED 20 Feb 2025
https://doi.org/10.12688/f1000research.161106.1
Research Article metrics AWAITING PEER REVIEW
Sketch of a novel approach to a neural model
[version 1; peer review: awaiting peer review]
Gabriele Scheler
Peer Reviewers Invited
PUBLISHED 18 Feb 2025
https://doi.org/10.12688/f1000research.161526.1
Case Report metrics
Case Report: First report of chronic osteomyelitis caused by Staphylococcus hyicus: a zoonotic pathogen with underreported clinical significance
[version 1; peer review: 1 approved with reservations]
Helmi Ernandes, Salma Kaoual, Sami Bahroun, Sahar Sallem, Ameur Triki, Ameni Bellaaj, Asma Zgolli, Samir Daghfous, Sophia Bouhalila Besbes, Ikbel Kooli
Peer Reviewers Teresa Semedo-Lemsaddek
PUBLISHED 18 Feb 2025
https://doi.org/10.12688/f1000research.76068.5
Research Article metrics
Revised
Cicada minimum age tree: Cryptic speciation and exponentially increasing base substitution rates in recent geologic time
[version 5; peer review: 2 approved, 2 approved with reservations, 1 not approved]
Soichi Osozawa, John Wakabayashi
Peer Reviewers Sungsik Kong; David A Duchêne; Fan Song; Jacek Szwedo; Christopher H Dietrich
  • Funder
  • Japan Society for the Promotion of Science
LATEST VERSION PUBLISHED 14 Feb 2025
https://doi.org/10.12688/f1000research.161286.1
Research Article metrics AWAITING PEER REVIEW
Evaluate the Efficacy of Selected Microorganism and their Consortium for Degradation of Low-Density Polyethylene Bags Under Pot Conditions
[version 1; peer review: awaiting peer review]
Tadila Desalegn Asfaw, Atsede Muleta, Zewdu Teshome Awlachew
Peer Reviewers Invited
  • Funder
  • No fund
PUBLISHED 11 Feb 2025
101-120 of 4,523 ARTICLES
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