Cell & Molecular Biology

Cell & Molecular Biology

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261-273 of 273 ARTICLES
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 in 
https://doi.org/10.12688/f1000research.26771.2
Software Tool Article metrics
Revised
HPAStainR: a Bioconductor and Shiny app to query protein expression patterns in the Human Protein Atlas
[version 2; peer review: 3 approved]
Tim O. Nieuwenhuis, Marc K. Halushka
Peer Reviewers Mazdak Salavati; Laurent Gatto; Yasin Kaymaz
  • Funders
  • National Heart, Lung, and Blood Institute
  • National Institutes of Health
LATEST VERSION PUBLISHED 22 Mar 2021
https://doi.org/10.12688/f1000research.27532.2
Brief Report metrics
Revised
Genome-wide screening of upstream transcription factors using an expression library
[version 2; peer review: 2 approved]
Naoya Yahagi, Yoshinori Takeuchi
Peer Reviewers Kazuhiko Igarashi; Harukazu Suzuki
  • Funders
  • Suzuken Memorial Foundation
  • SENSHIN Medical Research Foundation
  • Japan Foundation for Applied Enzymology
  • Ministry of Education, Culture, Sports, Science and Technology
  • Uehara Memorial Foundation
  • Naito Foundation
  • Okinaka Memorial Institute for Medical Research
  • Takeda Science Foundation
  • Japan Heart Foundation
  • Kanae Foundation for the Promotion of Medical Science
  • Ono Medical Research Foundation
  • Nakatani Foundation for Advancement of Measuring Technologies in Biomedical Engineering
  • Senri Life Science Foundation
LATEST VERSION PUBLISHED 08 Mar 2021
https://doi.org/10.12688/f1000research.40668.1
Software Tool Article metrics
RP-REP Ribosomal Profiling Reports: an open-source cloud-enabled framework for reproducible ribosomal profiling data processing, analysis, and result reporting
[version 1; peer review: 2 approved]
Travis L. Jensen, William F. Hooper, Sami R. Cherikh, Johannes B. Goll
Peer Reviewers Molly Hannigan and Christopher Nicchitta; Jordan A. Berg
  • Funders
  • The Emmes Company
  • National Institutes of Allergy and Infectious Disease
PUBLISHED 24 Feb 2021
https://doi.org/10.12688/f1000research.51143.1
Software Tool Article metrics
periodicDNA: an R/Bioconductor package to investigate k-mer periodicity in DNA
[version 1; peer review: 1 approved, 3 approved with reservations]
Jacques Serizay, Julie Ahringer
Peer Reviewers Ilya Ioshikhes; Sabarinathan Radhakrishnan; Eugene Korotkov; Boris Lenhard
  • Funders
  • Wellcome Trust Senior Research Fellowship
  • Medical Research Council DTP studentship
PUBLISHED 24 Feb 2021
https://doi.org/10.12688/f1000research.24163.2
Method Article metrics
Revised
Spatial mapping of single cells in the Drosophila embryo from transcriptomic data based on topological consistency
[version 2; peer review: 2 approved]
Maryam Zand, Jianhua Ruan
Peer Reviewers Tianci Song and Rui Kuang; Adi Tarca
  • Funders
  • National Institutes of Health
  • National Science Foundation
LATEST VERSION PUBLISHED 09 Feb 2021
https://doi.org/10.12688/f1000research.24854.2
Research Article metrics
Revised
Detection of antifungal drug-resistant and ERG11 gene mutations among clinical isolates of Candida species isolated from Khartoum, Sudan.
[version 2; peer review: 2 approved, 1 not approved]
Ahmed Osman Mohamed, Malik Suliman Mohamed, Mohamed Abdelrahman Hussain, Ibrahim Fatahalrahman Ahmed
Peer Reviewers Rasoul Mohammadi; Raja Ahsan Aftab; Muhammad Sajid Hamid Akash
LATEST VERSION PUBLISHED 29 Jan 2021
https://doi.org/10.12688/f1000research.23712.4
Research Article metrics
Revised
Eggshell membrane for DNA sexing of the endangered Maleo (Macrocephalon maleo)
[version 4; peer review: 2 approved]
Pramana Yuda, Andie Wijaya Saputra
Peer Reviewers Sena Adi Subrata; Jessica Worthington Wilmer
  • Funders
  • E-PASS Project
  • Universitas Atma Jaya Yogyakarta
LATEST VERSION PUBLISHED 28 Jan 2021
https://doi.org/10.12688/f1000research.21142.2
Software Tool Article metrics
Revised
Falco: high-speed FastQC emulation for quality control of sequencing data
[version 2; peer review: 2 approved]
Guilherme de Sena Brandine, Andrew D. Smith
Peer Reviewers R Henrik Nilsson; Weihong Qi
LATEST VERSION PUBLISHED 27 Jan 2021
https://doi.org/10.12688/f1000research.25142.2
Research Article metrics
Revised
Anti-c-myc cholesterol based lipoplexes as onco-nanotherapeutic agents in vitro
[version 2; peer review: 3 approved]
Saffiya Habib, Aliscia Daniels, Mario Ariatti, Moganavelli Singh
Peer Reviewers Patrick Arbuthnot; Kaushik Pal; Basiru Olaitan Ajiboye
  • Funder
  • National Research Foundation
LATEST VERSION PUBLISHED 07 Jan 2021
https://doi.org/10.12688/f1000research.25390.2
Research Article metrics
Revised
A proposed molecular mechanism for pathogenesis of severe RNA-viral pulmonary infections
[version 2; peer review: 4 approved]
Peter K. Rogan, Eliseos J. Mucaki, Ben C. Shirley
Peer Reviewers Maurizio Romano; Mansi Srivastava; Gregory Fonseca; Ian Eperon
  • Funders
  • Compute Canada
  • Canada Foundation for Innovation
  • Canada Research Chairs
LATEST VERSION PUBLISHED 06 Jan 2021
https://doi.org/10.12688/f1000research.28175.1
Research Article metrics
Energy-dependent protein folding: modeling how a protein folding machine may work
[version 1; peer review: 1 approved, 3 approved with reservations]
Harutyun Sahakyan, Karen Nazaryan, Arcady Mushegian, Irina Sorokina
Peer Reviewers Lisa J. Lapidus; Stephen D. Fried; Antonio Trovato; José Arcadio Farías Rico
  • Funders
  • Foundation Armenia (Switzerland)
  • National Academy of Sciences of Armenia
  • Strenic LLC
  • National Science Foundation
PUBLISHED 05 Jan 2021
https://doi.org/10.12688/f1000research.23390.2
Software Tool Article metrics
Revised
Seqpare: a novel metric of similarity between genomic interval sets
[version 2; peer review: 2 approved]
Selena C. Feng, Nathan C. Sheffield, Jianglin Feng
Peer Reviewers Zhaohui Steve Qin; Burcak Otlu
LATEST VERSION PUBLISHED 04 Jan 2021
https://doi.org/10.12688/f1000research.15666.3
Research Article metrics
Revised
A systematic performance evaluation of clustering methods for single-cell RNA-seq data
[version 3; peer review: 2 approved]
Angelo Duò, Mark D. Robinson, Charlotte Soneson
Peer Reviewers Jean Fan; Saskia Freytag
  • Funders
  • Swiss National Science Foundation
  • Chan Zuckerberg Initiative
LATEST VERSION PUBLISHED 16 Nov 2020
261-273 of 273 ARTICLES
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