Cell & Molecular Biology

Cell & Molecular Biology

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https://doi.org/10.12688/f1000research.151954.2
Research Article metrics
Revised
Absent in Melanoma 2 Gene Associated Periodontitis and Coronary Heart Disease
[version 2; peer review: 1 approved, 2 approved with reservations]
Zina Ali Daily, Batool Hassan Al-Ghurabi
Peer Reviewers Athraa Ali Mahmood; Paras Ahmad; Snophia Suresh
LATEST VERSION PUBLISHED 14 Jul 2025
https://doi.org/10.12688/f1000research.163152.1
Research Article metrics
Leveraging Synthetic Data to Validate a Benchmark Study for Differential Abundance Tests for 16S Microbiome Sequencing Data 
[version 1; peer review: 2 approved with reservations]
Eva Kohnert, Clemens Kreutz
Peer Reviewers Aaron W Miller; Graziano Pesole and Giuseppe Defazio
PUBLISHED 25 Jun 2025
https://doi.org/10.12688/f1000research.164583.1
Software Tool Article metrics
Assembly and quantification of transcripts from noisy long reads with NIFFLR
[version 1; peer review: 1 approved with reservations, 2 not approved]
Alina Guo, Mihaela Pertea, Aleksey V Zimin
Peer Reviewers Colin Dewey; Fairlie Reese; Yuan Gao
  • Funders
  • Directorate for Biological Sciences
  • NIH
PUBLISHED 20 Jun 2025
https://doi.org/10.12688/f1000research.158944.2
Research Article metrics
Revised
The potential effects of cranberry extract on indomethacin-induced gastric ulcer in rats
[version 2; peer review: 1 approved, 2 approved with reservations]
Zaid Abdul-Majeed, Mohammed Qasim Yahya Malallah A. Al-Atrakji
Peer Reviewers Suraj N Mali; Vishal Dubey; Vijayakumar A. R
LATEST VERSION PUBLISHED 10 Jun 2025
https://doi.org/10.12688/f1000research.163843.1
Research Article metrics
Differences between human male and female neutrophils with respect to which RNAs are present in polysomes
[version 1; peer review: 1 not approved]
Darrell Pilling, Kristen M. Consalvo, Sara A. Kirolos, Richard H. Gomer
Peer Reviewers Sebastian Korste
  • Funder
  • National Institutes of Health
PUBLISHED 30 May 2025
https://doi.org/10.12688/f1000research.161982.1
Case Report metrics AWAITING PEER REVIEW
Case Report: A rare case of primary tuberculosis of the gallbladder
[version 1; peer review: awaiting peer review]
Zied Hadrich, Mohamed Guelbi, Mohamed Hajri, Aziz Atallah, Taher Labidi, Zeineb Benzarti, Rached Bayar, Sahir Omrani
Peer Reviewers Invited
PUBLISHED 15 Apr 2025
https://doi.org/10.12688/f1000research.130430.3
Data Note metrics
Revised
Cigarette smoke alters circRNA expression in human T-cells
[version 3; peer review: 1 approved, 2 approved with reservations]
So Jin Hong, Zhaohao Liao, Kenneth W. Witwer, Ashley E. Russell
Peer Reviewers Thivanka Muthumalage; Zahraa Rahal; Meity Ardiana
  • Funder
  • National Institute on Drug Abuse
LATEST VERSION PUBLISHED 09 Apr 2025
https://doi.org/10.12688/f1000research.160063.2
Software Tool Article metrics
Revised
mimicINT: A workflow for microbe-host protein interaction inference
[version 2; peer review: 2 approved, 1 approved with reservations]
Sébastien A. Choteau, Kevin Maldonado, Aurélie Bergon, Marceau Cristianini, Mégane Boujeant, Lilian Drets, Christine Brun, Lionel Spinelli, Andreas Zanzoni
Peer Reviewers Ylva Ivarsson; Sobia Idrees; Leandro Simonetti
  • Funders
  • Excellence Initiative of Aix-Marseille University - A*MIDEX
  • Agence Nationale de la Recherche
  • Fondation pour la Recherche Médicale
  • European Union’s Horizon 2020 Research and Innovation Programme
LATEST VERSION PUBLISHED 28 Mar 2025
https://doi.org/10.12688/f1000research.160607.1
Brief Report metrics
Recombinant expression of receptor binding domains of all eight subtypes of botulinum neurotoxin type A for generation of antitoxins with broad reactivity
[version 1; peer review: 1 approved, 2 approved with reservations]
Nga Quynh Pham, Tam Trang Mai, Tran Bao Anh Dang, Ly Huong Tran, Quynh Mai Vu, Chien Trong Nguyen, Anh Thi Phuong Tran, Tran Nhat Minh Dang, Van Anh Tran, Thinh Huy Tran, Van Khanh Tran, Hoa Quang Le
Peer Reviewers Ilias B Esmagambetov; Jianlong Lou; Charles B Shoemaker
  • Funder
  • Hanoi University of Science and Technology
PUBLISHED 05 Feb 2025
https://doi.org/10.12688/f1000research.151350.2
Systematic Review metrics
Revised
Diagnostic and Prognostic Values of miRNAs in High-Grade Gliomas: A Systematic Review
[version 2; peer review: 2 approved]
Renindra Ananda Aman, Mohammad Galih Pratama, Ricky Rusydi Satriawan, Irfani Ryan Ardiansyah, I Ketut Agus Suanjaya
Peer Reviewers Dessika Rahmawati; Abel Po-Hao Huang
LATEST VERSION PUBLISHED 15 Jan 2025
https://doi.org/10.12688/f1000research.123975.3
Research Article metrics
Revised
Differential gene expression during recall of behaviorally conditioned immune enhancement in rats: a pilot study
[version 3; peer review: 1 approved, 3 approved with reservations]
Markus Rueckels, Marcus Picard-Maureau
Peer Reviewers Manfred Schedlowski and Laura Lückemann; Daniele Suzete Persike de Oliveira; Marie Jakobs; Federico Bermudez-Rattoni and Daniel Osorio Gomez
  • Funder
  • Lisa-Kolk-Stiftung
LATEST VERSION PUBLISHED 10 Jan 2025
https://doi.org/10.12688/f1000research.126732.3
Research Article metrics
Revised
Regulation of MAP2, GFAP, and calcium in the CA3 Region Following Kainic Acid Exposure to  organotypic hippocampal slice culture
[version 3; peer review: 2 approved]
Machlusil Husna, Kusworini Handono, Hidayat Sujuti, Aulanni'am Aulanni'am, Ettie Rukmigarsari
Peer Reviewers Abdul Gofir; Amin Derouiche
LATEST VERSION PUBLISHED 03 Jan 2025
https://doi.org/10.12688/f1000research.155356.2
Study Protocol metrics
Revised
Muscarinic receptor agonists and positive allosteric modulators in animal models of psychosis: protocol for a systematic review and meta-analysis
[version 2; peer review: 1 approved, 2 approved with reservations]
Spyridon Siafis, Nobuyuki Nomura, Johannes Schneider-Thoma, Irene Bighelli, Alexandra Bannach-Brown, Fiona J. Ramage, Francesca Tinsdeall, Ioannis Mantas, Sameer Jauhar, Sridhar Natesan, Anthony C. Vernon, Andrea de Bartolomeis, Sabine M. Hölter, Natascha I. Drude, Ulf Tölch, Wulf-Peter Hansen, Virginia Chiocchia, Oliver D. Howes, Josef Priller, Malcolm R. Macleod, Georgia Salanti, Stefan Leucht
Peer Reviewers Daniel Foster; William Messer; Xiaonan Guo
  • Funders
  • Bundesministerium für Bildung und Forschung
  • Medical Research Council-UK
  • Federal Ministry of Education and Research
  • Wellcome Trust
LATEST VERSION PUBLISHED 02 Jan 2025
https://doi.org/10.12688/f1000research.155230.2
Study Protocol metrics
Revised
Computational Study Protocol: Leveraging Synthetic Data to Validate a Benchmark Study for Differential Abundance Tests for 16S Microbiome Sequencing Data
[version 2; peer review: 2 approved]
Eva Kohnert, Clemens Kreutz
Peer Reviewers Leo Lahti and Juho Pelto; Jacob T. Nearing
LATEST VERSION PUBLISHED 02 Jan 2025
https://doi.org/10.12688/f1000research.130618.2
Research Article metrics
Revised
In silico molecular docking and molecular dynamic simulation of agarwood compounds with molecular targets of Alzheimer’s disease 
[version 2; peer review: 3 approved, 1 not approved]
Phaniendra Alugoju, Vishwambar Vishnu Bhandare, Vishal S. Patil, Krishna Swamy V. K. D, Prem Kumar Borugadda, Tewin Tencomnao
Peer Reviewers Sailu Sarvagalla; Yassir Boulaamane and Iman Touati; Abdul Rajjak Shaikh; James Adams
  • Funder
  • Thailand Science Research and Innovation Fund Chulalongkorn University
LATEST VERSION PUBLISHED 16 Dec 2024
https://doi.org/10.12688/f1000research.134121.6
Opinion Article metrics
Revised
Viral interactions with host factors (TIM-1, TAM -receptors, Glut-1) are related to the disruption of glucose and ascorbate transport and homeostasis, causing the haemorrhagic manifestations of viral haemorrhagic fevers.
[version 6; peer review: 2 approved]
Ivan Chicano Wust
Peer Reviewers Hong-Li Liu; Chao Qin
LATEST VERSION PUBLISHED 09 Dec 2024
https://doi.org/10.12688/f1000research.143506.2
Review metrics
Revised
Enter the Matrix: Fibroblast-immune cell interactions shape extracellular matrix deposition in health and disease.
[version 2; peer review: 1 approved, 3 approved with reservations]
Anthony Altieri, Grace V. Visser, Matthew B. Buechler
Peer Reviewers Mateusz S. Wietecha; Valentina Pucino; Spyridon Makris; George Kollias
  • Funders
  • Medicine by Design
  • Canadian Institutes of Health Research
LATEST VERSION PUBLISHED 05 Dec 2024
https://doi.org/10.12688/f1000research.158007.1
Brief Report metrics
Investigating the Role of MUC19 in Glioblastoma Multiforme: Genetic Alterations and Implications for Patient Survival and Therapeutic Targeting
[version 1; peer review: 1 approved]
Abdallah Arafah, Woo Rin Lee
Peer Reviewers Amna Makawi
PUBLISHED 03 Dec 2024
https://doi.org/10.12688/f1000research.123181.3
Research Article metrics
Revised
Structural and Functional Implications of Polyarginine Addition to Green Fluorescent Protein Expression in Saccharomyces cerevisiae INVSc1
[version 3; peer review: 5 not approved]
Shania Safera Tandio Saputro, Khayu Wahyunita, Astutiati Nurhasanah, Yudhi Nugraha, Irvan Faizal, Sabar Pambudi, Syahputra Wibowo, Andri Pramesyanti Pramono
Peer Reviewers Khomaini Hasan; Hisao Moriya; Stéphane Guyot; Yide Huang; Francine M Perrine-Walker
  • Funder
  • The works were financially supported by the Universitas Pembangunan Nasional Veteran Jakarta, DRPM Grant from Kemendikbud.
LATEST VERSION PUBLISHED 25 Nov 2024
https://doi.org/10.12688/f1000research.75116.3
Research Article metrics
Revised
Ethanol consumption during gestation promotes placental alterations in IGF-1 deficient mouse placentas
[version 3; peer review: 1 approved, 2 approved with reservations, 1 not approved]
Irene Martín-Estal, Oscar R Fajardo-Ramírez, Mario Bermúdez De León, Carolina Zertuche-Mery, Diego Rodríguez-Mendoza, Patricio Gómez-Álvarez, Marcela Galindo-Rangel, Andrea Leal López, Inma Castilla-Cortázar, Fabiola Castorena-Torres
Peer Reviewers Ludivine Doridot; Berthold Huppertz; Lisa Akison and Sarah Steane; Johannes van der Merwe
  • Funder
  • CONACYT
LATEST VERSION PUBLISHED 31 Oct 2024
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